Deprecated!
This application is deprecated. Please use the latest version of the tool here.
Please cite:
I. S. Vlachos, M. D. Paraskevopoulou, D. Karagkouni, G. Georgakilas, T. Vergoulis, I. Kanellos, I-L. Anastasopoulos, S. Maniou, K. Karathanou, D. Kalfakakou, A. Fevgas, T. Dalamagas and A. G. Hatzigeorgiou. DIANA-TarBase v7.0: indexing more than half a million experimentally supported miRNA:mRNA interactions. Nucl. Acids Res. (2014)
Data Download:
DIANA-TarBase v7 is available for scientific non-profit and non-commercial use! Download TarBase v7 by following this link
|
||||||||
Related Pathways
Publication year
Prediction score
Filters
Selected:
Species: -
Regulation: -
Validation: -
Validated: -
Sources: -
Methods: -
Species: -
Regulation: -
Validation: -
Validated: -
Sources: -
Methods: -
Remove all 
Species
Method Type
Method
Regulation type
Validation type
Validated as
Source
Publication year
Prediction score
Gene name
miRNA name
Methods
Pred.Score
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr4:148557128-148557156 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr11:4481128-4481153 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr18:9215472-9215492 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr3:127807695-127807718 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr11:72926934-72926962 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr8:80701013-80701037 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr8:80701013-80701037 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr7:87397374-87397399 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr9:119043110-119043129 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr13:100703340-100703349 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr4:53565625-53565648 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr3:136936620-136936647 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr3:136936620-136936647 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr12:15792411-15792419 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr18:67794109-67794130 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr11:88924153-88924177 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr11:88924153-88924177 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr13:19592147-19592170 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr13:19592147-19592170 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr7:79360318-79360346 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr1:58529278-58529306 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr1:58529278-58529306 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr18:36297785-36297806 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr11:93946401-93946419 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr4:134129960-134129987 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr4:134129960-134129987 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr16:11805164-11805184 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr19:32514560-32514580 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr10:60712123-60712144 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr10:85888409-85888431 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr10:85888409-85888431 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr10:126999284-126999311 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr4:89180912-89180927 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr2:49550967-49550989 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr2:49550967-49550989 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr3:32578954-32578979 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr4:149120144-149120170 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr5:123166960-123166981 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr5:123166960-123166981 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr9:96539817-96539827 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr9:61417383-61417409 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr9:61417383-61417409 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Wars (mmu)
mmu-miR-99a-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr12:108861099-108861115 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Fzd5 (mmu)
mmu-miR-99a-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr1:64731115-64731142 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr1:64731115-64731142 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Large (mmu)
mmu-miR-99a-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr8:72852183-72852208 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Rac1 (mmu)
mmu-miR-99a-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr5:143506205-143506227 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Pla2g6 (mmu)
mmu-miR-99a-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr15:79286237-79286260 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Nxf1 (mmu)
mmu-miR-99a-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr19:8765825-8765852 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
3110057O12Rik (mmu)
mmu-miR-99a-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr3:40935506-40935524 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Atp6v0b (mmu)
mmu-miR-99a-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr4:117886828-117886856 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Baz2a (mmu)
mmu-miR-99a-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr10:128128260-128128287 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Ppp2r5c (mmu)
mmu-miR-99a-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr12:110582278-110582299 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Pvrl3 (mmu)
mmu-miR-99a-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr16:46447378-46447403 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr16:46447378-46447403 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Phrf1 (mmu)
mmu-miR-99a-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr7:141258321-141258348 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Hoxa1 (mmu)
mmu-miR-99a-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr6:52155628-52155646 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Trib1 (mmu)
mmu-miR-99a-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr15:59656034-59656058 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr15:59656034-59656058 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Cpeb4 (mmu)
mmu-miR-99a-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr11:31872282-31872304 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Slc4a3 (mmu)
mmu-miR-99a-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr1:75561332-75561354 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Rmnd5a (mmu)
mmu-miR-99a-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr6:71390357-71390378 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr6:71390357-71390378 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Icmt (mmu)
mmu-miR-99a-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr4:152305824-152305848 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr4:152305824-152305848 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Ankrd11 (mmu)
mmu-miR-99a-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr8:122890824-122890846 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr8:122890824-122890846 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Znf512b (mmu)
mmu-miR-99a-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr2:181583415-181583429 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr2:181583415-181583429 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
2700062C07Rik (mmu)
mmu-miR-99a-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr18:24477670-24477695 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Baiap2 (mmu)
mmu-miR-99a-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr11:120002135-120002159 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Sun1 (mmu)
mmu-miR-99a-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr5:139235607-139235628 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr5:139235607-139235628 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Cd44 (mmu)
mmu-miR-99a-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr2:102842930-102842951 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Cnot4 (mmu)
mmu-miR-99a-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr6:35064938-35064949 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Gmeb2 (mmu)
mmu-miR-99a-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr2:181251644-181251665 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Ephb3 (mmu)
mmu-miR-99a-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr16:21220877-21220896 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Nfe2l1 (mmu)
mmu-miR-99a-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr11:96819049-96819068 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Zfp503 (mmu)
mmu-miR-99a-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr14:21985318-21985342 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Emc6 (mmu)
mmu-miR-99a-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr11:73176552-73176572 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr11:73176552-73176572 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Lpcat1 (mmu)
mmu-miR-99a-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr13:73516051-73516075 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Gli3 (mmu)
mmu-miR-99a-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr13:15729448-15729476 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Sertad2 (mmu)
mmu-miR-99a-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr11:20648478-20648499 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Kcnj2 (mmu)
mmu-miR-99a-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr11:111075706-111075728 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr11:111075706-111075728 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Tab3 (mmu)
mmu-miR-99a-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chrX:85633660-85633682 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Rnf150 (mmu)
mmu-miR-99a-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr8:83091128-83091151 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Hist2h4 (mmu)
mmu-miR-99a-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr3:96263006-96263029 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Hlx (mmu)
mmu-miR-99a-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr1:184727152-184727158 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr1:184727152-184727158 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Bend3 (mmu)
mmu-miR-99a-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr10:43513147-43513170 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Vgll4 (mmu)
mmu-miR-99a-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr6:114921608-114921630 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Myo9a (mmu)
mmu-miR-99a-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr9:59779980-59779993 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr9:59779980-59779993 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Slc17a5 (mmu)
mmu-miR-99a-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr9:78578629-78578642 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Fam21 (mmu)
mmu-miR-99a-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr6:116216090-116216113 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Trim71 (mmu)
mmu-miR-99a-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr9:114508237-114508250 (UNKNOWN)
Dicer wild-type mESC CLIP library. For immunoprecipitation, anti-mouse Ago2 mAb (lot# PEM0820 Wako 2x100ul 018-22021) was used.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Son (mmu)
mmu-miR-99a-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr16:91662800-91662814 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr16:91662800-91662814 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Thap11 (mmu)
mmu-miR-99a-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr8:105856850-105856871 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr8:105856850-105856871 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Gltscr2 (mmu)
mmu-miR-99a-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr7:15942833-15942861 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Taok1 (mmu)
mmu-miR-99a-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr11:77532399-77532426 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Kdm6b (mmu)
mmu-miR-99a-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr11:69399500-69399526 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Spata13 (mmu)
mmu-miR-99a-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr14:60761773-60761794 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Zfp385a (mmu)
mmu-miR-99a-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr15:103314322-103314336 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Phf20 (mmu)
mmu-miR-99a-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr2:156267523-156267544 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Klf7 (mmu)
mmu-miR-99a-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr1:64034202-64034227 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Nars (mmu)
mmu-miR-99a-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr18:64509274-64509295 (UNKNOWN)
Dicer wild-type mESC CLIP library. For immunoprecipitation, anti-mouse Ago2 mAb (lot# PEM0820 Wako 2x100ul 018-22021) was used.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Sertad4 (mmu)
mmu-miR-99a-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr1:192855618-192855639 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr1:192855618-192855639 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Arl8b (mmu)
mmu-miR-99a-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr6:108822638-108822660 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0