Deprecated!
This application is deprecated. Please use the latest version of the tool here.
Please cite:
I. S. Vlachos, M. D. Paraskevopoulou, D. Karagkouni, G. Georgakilas, T. Vergoulis, I. Kanellos, I-L. Anastasopoulos, S. Maniou, K. Karathanou, D. Kalfakakou, A. Fevgas, T. Dalamagas and A. G. Hatzigeorgiou. DIANA-TarBase v7.0: indexing more than half a million experimentally supported miRNA:mRNA interactions. Nucl. Acids Res. (2014)
Data Download:
DIANA-TarBase v7 is available for scientific non-profit and non-commercial use! Download TarBase v7 by following this link
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Species
Method Type
Method
Regulation type
Validation type
Validated as
Source
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Prediction score
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Gene name
miRNA name
Methods
Pred.Score
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr10:128321234-128321260 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr15:102432172-102432195 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr15:102432172-102432195 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr15:102436219-102436232 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr15:102436219-102436232 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr14:30875027-30875050 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr4:55528045-55528067 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr9:44803627-44803640 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr9:44819746-44819771 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr9:44819746-44819771 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr9:44820895-44820920 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr9:44821255-44821279 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr9:44836663-44836686 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr8:111156271-111156292 (UNKNOWN)
8-10 week old male C57Bl/6 mice. 2 biological replicates for quiescent liver. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr8:111154629-111154650 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr8:111156051-111156073 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr8:111156271-111156292 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr8:111172419-111172441 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr2:33247126-33247147 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr6:39608251-39608274 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr6:39609126-39609149 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr6:39609126-39609149 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr6:39609535-39609556 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr6:39609549-39609574 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr6:39609549-39609574 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr2:181551965-181551991 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr2:181551965-181551991 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr4:129645252-129645275 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr4:129646941-129646951 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr4:129647748-129647771 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr5:88758165-88758193 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr5:88759257-88759270 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr1:52457790-52457813 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr10:79864344-79864369 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr13:5869610-5869634 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr7:27207311-27207332 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr11:61777211-61777234 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr5:33762500-33762521 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr6:124761136-124761162 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr1:87945626-87945649 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr7:6707724-6707747 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr6:92168418-92168439 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr8:3154758-3154782 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr8:3167548-3167575 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr8:85097732-85097755 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr6:122843728-122843753 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr6:122843728-122843753 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr1:80265858-80265883 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr10:128361923-128361944 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chrX:73686437-73686457 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr8:105666744-105666769 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr15:101211663-101211685 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr15:101211663-101211685 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr11:78222832-78222854 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr8:3456038-3456060 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr8:4247869-4247896 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr6:52231798-52231822 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr11:100884744-100884768 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr17:35834218-35834244 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr7:68201317-68201337 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr6:71389467-71389495 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr12:85133275-85133300 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr7:7291800-7291822 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr11:69758502-69758512 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr2:91212476-91212499 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr2:154585848-154585867 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 1hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr2:154587912-154587936 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr4:129308282-129308304 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr4:129308484-129308503 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr2:122684415-122684443 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr10:127069411-127069436 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr7:25758469-25758495 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr11:89039184-89039211 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr2:181645522-181645534 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr11:4098359-4098381 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Coro1c (mmu)
mmu-miR-7a-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr5:113843498-113843524 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Eif4g2 (mmu)
mmu-miR-7a-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr7:111072505-111072528 (UNKNOWN)
8-10 week old male C57Bl/6 mice. 2 biological replicates for quiescent liver. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Fkbp7 (mmu)
mmu-miR-7a-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr2:76672984-76673002 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Naa60 (mmu)
mmu-miR-7a-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr16:3904601-3904621 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Bid (mmu)
mmu-miR-7a-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr6:120895680-120895694 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Ddr1 (mmu)
mmu-miR-7a-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr17:35682193-35682220 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Nfat5 (mmu)
mmu-miR-7a-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr8:107368165-107368190 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Pias4 (mmu)
mmu-miR-7a-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr10:81153511-81153533 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Tmbim1 (mmu)
mmu-miR-7a-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr1:74300282-74300306 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr1:74300604-74300617 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Tbrg4 (mmu)
mmu-miR-7a-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr11:6616409-6616430 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Pnpla6 (mmu)
mmu-miR-7a-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr8:3537322-3537349 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Mfsd10 (mmu)
mmu-miR-7a-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr5:34636677-34636699 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Tcirg1 (mmu)
mmu-miR-7a-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr19:3898577-3898601 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Prg4 (mmu)
mmu-miR-7a-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr1:150456135-150456158 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 1hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr1:150456135-150456158 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 48hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Atn1 (mmu)
mmu-miR-7a-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr6:124746597-124746619 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr6:124747171-124747182 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Galnt1 (mmu)
mmu-miR-7a-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr18:24285216-24285236 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Ube2m (mmu)
mmu-miR-7a-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr7:13035221-13035244 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Ddx3x (mmu)
mmu-miR-7a-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chrX:13293125-13293145 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chrX:13293125-13293145 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Brpf1 (mmu)
mmu-miR-7a-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr6:113315081-113315093 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr6:113315198-113315220 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Ap2a2 (mmu)
mmu-miR-7a-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr7:141621150-141621163 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Epha2 (mmu)
mmu-miR-7a-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr4:141308634-141308655 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr4:141308634-141308655 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Mprip (mmu)
mmu-miR-7a-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr11:59759371-59759397 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr11:59759371-59759397 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Ephb3 (mmu)
mmu-miR-7a-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr16:21214699-21214722 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr16:21214785-21214808 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Araf (mmu)
mmu-miR-7a-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chrX:20852346-20852374 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Raf1 (mmu)
mmu-miR-7a-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr6:115618768-115618792 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Bloc1s6 (mmu)
mmu-miR-7a-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr2:122746741-122746761 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Man1a (mmu)
mmu-miR-7a-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr10:54074835-54074856 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 1hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Ndufa9 (mmu)
mmu-miR-7a-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr6:126827612-126827639 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 1hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Uba1 (mmu)
mmu-miR-7a-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chrX:20675685-20675707 (UNKNOWN)
8-10 week old male C57Bl/6 mice. 2 biological replicates for quiescent liver. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chrX:20675685-20675707 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Sh3gl1 (mmu)
mmu-miR-7a-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr17:56017581-56017605 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr17:56017581-56017605 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Nom1 (mmu)
mmu-miR-7a-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr5:29439917-29439944 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Srpk1 (mmu)
mmu-miR-7a-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr17:28589599-28589621 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Flii (mmu)
mmu-miR-7a-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr11:60716687-60716714 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 1hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr11:60716687-60716714 (UNKNOWN)
8-10 week old male C57Bl/6 mice. 2 biological replicates for quiescent liver. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Sri (mmu)
mmu-miR-7a-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr5:8068653-8068675 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Smg9 (mmu)
mmu-miR-7a-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr7:24420823-24420845 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 1hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Mnt (mmu)
mmu-miR-7a-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr11:74845161-74845176 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Stk38l (mmu)
mmu-miR-7a-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr6:146776658-146776681 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Ptrf (mmu)
mmu-miR-7a-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr11:100957498-100957526 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr11:100957498-100957526 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Clint1 (mmu)
mmu-miR-7a-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr11:45893997-45894022 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr11:45906376-45906398 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Nfix (mmu)
mmu-miR-7a-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr8:84774086-84774110 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Dpp9 (mmu)
mmu-miR-7a-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr17:56205776-56205803 (UNKNOWN)
8-10 week old male C57Bl/6 mice. 2 biological replicates for quiescent liver. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr17:56191123-56191133 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Zdhhc24 (mmu)
mmu-miR-7a-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr19:4884921-4884946 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr19:4885053-4885079 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Rab34 (mmu)
mmu-miR-7a-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr11:78189593-78189614 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Rfx5 (mmu)
mmu-miR-7a-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr3:94959458-94959474 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Insig2 (mmu)
mmu-miR-7a-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr1:121304502-121304527 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Oxa1l (mmu)
mmu-miR-7a-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr14:54366783-54366810 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Tpr (mmu)
mmu-miR-7a-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr1:150442068-150442090 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 48hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Tom1l2 (mmu)
mmu-miR-7a-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr11:60229700-60229728 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 1hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Hoxc8 (mmu)
mmu-miR-7a-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr15:102990786-102990813 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Ppard (mmu)
mmu-miR-7a-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr17:28298756-28298779 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr17:28299690-28299712 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Apc (mmu)
mmu-miR-7a-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr18:34314295-34314321 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0