Deprecated!
This application is deprecated. Please use the latest version of the tool here.
Please cite:
I. S. Vlachos, M. D. Paraskevopoulou, D. Karagkouni, G. Georgakilas, T. Vergoulis, I. Kanellos, I-L. Anastasopoulos, S. Maniou, K. Karathanou, D. Kalfakakou, A. Fevgas, T. Dalamagas and A. G. Hatzigeorgiou. DIANA-TarBase v7.0: indexing more than half a million experimentally supported miRNA:mRNA interactions. Nucl. Acids Res. (2014)
Data Download:
DIANA-TarBase v7 is available for scientific non-profit and non-commercial use! Download TarBase v7 by following this link
|
||||||||
Related Pathways
Publication year
Prediction score
Filters
Selected:
Species: -
Regulation: -
Validation: -
Validated: -
Sources: -
Methods: -
Species: -
Regulation: -
Validation: -
Validated: -
Sources: -
Methods: -
Remove all 
Species
Method Type
Method
Regulation type
Validation type
Validated as
Source
Publication year
Prediction score
Loading... |
| Wait until the result set is completed... |
Gene name
miRNA name
Methods
Pred.Score
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr13:75772260-75772288 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from KO miR-155 CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr13:75772289-75772309 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from KO miR-155 CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr13:75772260-75772288 (UNKNOWN)
8-10 week old male C57Bl/6 mice. 2 biological replicates for quiescent liver. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr11:68821669-68821690 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 1hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr3:107612553-107612577 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from KO miR-155 CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr11:90277114-90277142 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from WT CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr11:90277155-90277172 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from WT CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr11:90277114-90277142 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from KO miR-155 CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr11:90277114-90277142 (UNKNOWN)
8-10 week old male C57Bl/6 mice. 2 biological replicates for quiescent liver. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr11:86937497-86937518 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from WT CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr11:86936677-86936697 (UNKNOWN)
8-10 week old male C57Bl/6 mice. 2 biological replicates for quiescent liver. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr11:86936677-86936697 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 36hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr2:74521475-74521496 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from KO miR-155 CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr4:82296325-82296349 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 36hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr4:82296325-82296349 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 48hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr4:82291001-82291009 (UNKNOWN)
8-10 week old male C57Bl/6 mice. 2 biological replicates for quiescent liver. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr14:16430887-16430913 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 48hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr15:10329827-10329851 (UNKNOWN)
8-10 week old male C57Bl/6 mice. 2 biological replicates for quiescent liver. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr15:10329827-10329851 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 36hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr15:10329827-10329851 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 48hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr15:10335359-10335381 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 48hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr15:10329827-10329851 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 1hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr11:62895161-62895181 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from WT CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr11:62895161-62895181 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from KO miR-155 CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr11:4097091-4097116 (UNKNOWN)
8-10 week old male C57Bl/6 mice. 2 biological replicates for quiescent liver. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr13:98839092-98839119 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from KO miR-155 CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr13:98841568-98841590 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from KO miR-155 CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr13:98843612-98843634 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from KO miR-155 CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr13:98841568-98841590 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from WT CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr13:98843612-98843634 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from WT CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr13:98843612-98843634 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 36hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr13:98843612-98843634 (UNKNOWN)
8-10 week old male C57Bl/6 mice. 2 biological replicates for quiescent liver. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr7:143557779-143557805 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from WT CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr2:102781626-102781650 (UNKNOWN)
8-10 week old male C57Bl/6 mice. 2 biological replicates for quiescent liver. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr11:35786668-35786686 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from KO miR-155 CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr11:35786168-35786191 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from WT CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr11:35786668-35786686 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from WT CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr11:35790887-35790907 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from WT CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr11:35786168-35786191 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 36hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr3:88168756-88168776 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from KO miR-155 CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr3:88170413-88170435 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from KO miR-155 CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr3:88172031-88172051 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from KO miR-155 CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr3:88163013-88163039 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from WT CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr3:88172031-88172051 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from WT CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr3:88170413-88170435 (UNKNOWN)
8-10 week old male C57Bl/6 mice. 2 biological replicates for quiescent liver. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr18:68321669-68321694 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from KO miR-155 CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr18:68321669-68321694 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from WT CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr18:68321669-68321694 (UNKNOWN)
8-10 week old male C57Bl/6 mice. 2 biological replicates for quiescent liver. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr18:6203382-6203405 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from WT CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr18:6203382-6203405 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 48hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr18:6203382-6203405 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 36hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr15:65871929-65871949 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from KO miR-155 CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr3:103740094-103740116 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from WT CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr3:103742390-103742418 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from WT CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr3:103740094-103740116 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from KO miR-155 CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr3:103741919-103741942 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from KO miR-155 CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr3:103742390-103742418 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from KO miR-155 CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr3:103742390-103742418 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 48hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr3:103742390-103742418 (UNKNOWN)
8-10 week old male C57Bl/6 mice. 2 biological replicates for quiescent liver. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr3:103742390-103742418 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 36hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr13:13512179-13512206 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 1hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr13:13512179-13512206 (UNKNOWN)
8-10 week old male C57Bl/6 mice. 2 biological replicates for quiescent liver. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr13:13512179-13512206 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 36hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr13:13512179-13512206 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 48hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr9:44806592-44806612 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from WT CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr9:44806586-44806606 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from KO miR-155 CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr9:44806592-44806612 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from KO miR-155 CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr12:111656043-111656068 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from KO miR-155 CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr11:17940086-17940095 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from KO miR-155 CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr11:17940086-17940095 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from WT CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr1:121304558-121304578 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from KO miR-155 CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr1:121304558-121304578 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 36hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr10:9759292-9759312 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from WT CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr10:9759292-9759312 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from KO miR-155 CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr10:80686774-80686799 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from WT CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr11:52253181-52253202 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from WT CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr17:28969488-28969497 (UNKNOWN)
8-10 week old male C57Bl/6 mice. 2 biological replicates for quiescent liver. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr13:29907503-29907531 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from KO miR-155 CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr13:29907503-29907531 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from WT CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr8:105524666-105524694 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 36hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr8:105524666-105524694 (UNKNOWN)
8-10 week old male C57Bl/6 mice. 2 biological replicates for quiescent liver. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr5:118765373-118765401 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from WT CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr5:118765373-118765401 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from KO miR-155 CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr10:41530379-41530388 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from KO miR-155 CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr10:41530436-41530463 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from KO miR-155 CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr10:41530436-41530463 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from WT CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr19:29348810-29348833 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from KO miR-155 CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr19:29348810-29348833 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from WT CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr11:34089589-34089612 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from WT CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr11:34090873-34090898 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from WT CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr11:34089589-34089612 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from KO miR-155 CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr11:34090873-34090898 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from KO miR-155 CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr6:67291516-67291535 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from WT CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr6:67291616-67291637 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from WT CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr6:67291516-67291535 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from KO miR-155 CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr6:67291616-67291637 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from KO miR-155 CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr10:128392246-128392273 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from WT CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr10:128391631-128391659 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from KO miR-155 CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr10:128392246-128392273 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from KO miR-155 CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr2:71903809-71903818 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from WT CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr10:127660521-127660542 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from KO miR-155 CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr10:127660521-127660542 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from WT CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr3:142793656-142793680 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from KO miR-155 CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr3:142803631-142803639 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from KO miR-155 CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr3:142803650-142803677 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from KO miR-155 CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr3:142820552-142820575 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from KO miR-155 CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr3:142792521-142792529 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from WT CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr3:142803631-142803639 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from WT CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr3:142820552-142820575 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from WT CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr1:106772471-106772493 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from WT CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr1:106772471-106772493 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 36hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr1:106772471-106772493 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 1hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr10:7919612-7919620 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from WT CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr1:177763871-177763877 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from KO miR-155 CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr14:30040356-30040384 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 1hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr14:30040356-30040384 (UNKNOWN)
8-10 week old male C57Bl/6 mice. 2 biological replicates for quiescent liver. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr11:11771012-11771037 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from WT CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr11:11771012-11771037 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from KO miR-155 CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr11:88049095-88049122 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from KO miR-155 CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr6:71389680-71389707 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from WT CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr12:35503888-35503911 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 36hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr12:35503888-35503911 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 48hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr12:35503888-35503911 (UNKNOWN)
8-10 week old male C57Bl/6 mice. 2 biological replicates for quiescent liver. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr2:167299765-167299785 (UNKNOWN)
8-10 week old male C57Bl/6 mice. 2 biological replicates for quiescent liver. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr2:167299765-167299785 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 48hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr5:4099244-4099266 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from WT CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr5:4099244-4099266 (UNKNOWN)
8-10 week old male C57Bl/6 mice. 2 biological replicates for quiescent liver. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr5:4099244-4099266 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 36hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr8:105305242-105305265 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from KO miR-155 CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr8:105305242-105305265 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from WT CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr8:111157641-111157665 (UNKNOWN)
8-10 week old male C57Bl/6 mice. 2 biological replicates for quiescent liver. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr3:138459119-138459144 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from WT CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr3:138462387-138462409 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from WT CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr11:75704603-75704625 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from KO miR-155 CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr11:75704603-75704625 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from WT CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr13:58126491-58126513 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from KO miR-155 CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr13:58125979-58126001 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from WT CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr13:58126491-58126513 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from WT CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr13:58126742-58126770 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from WT CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr13:5865279-5865302 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from WT CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr13:5865279-5865302 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from KO miR-155 CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Vezf1 (mmu)
mmu-miR-30b-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr11:88083348-88083370 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from KO miR-155 CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Zfp687 (mmu)
mmu-miR-30b-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr3:95010449-95010469 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 1hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Rac1 (mmu)
mmu-miR-30b-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr5:143505548-143505576 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from WT CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr5:143506251-143506273 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from WT CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Clpx (mmu)
mmu-miR-30b-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr9:65330188-65330216 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from WT CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Ddr1 (mmu)
mmu-miR-30b-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr17:35681662-35681690 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from KO miR-155 CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr17:35681662-35681690 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from WT CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Nfat5 (mmu)
mmu-miR-30b-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr8:107377842-107377862 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from WT CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr8:107378390-107378398 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from WT CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Trmt10a (mmu)
mmu-miR-30b-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr3:138157800-138157828 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 48hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Atad5 (mmu)
mmu-miR-30b-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr11:80135674-80135696 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from KO miR-155 CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr11:80135674-80135696 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from WT CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Cmah (mmu)
mmu-miR-30b-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr13:24470012-24470024 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from WT CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Il12rb2 (mmu)
mmu-miR-30b-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr6:67351333-67351353 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from KO miR-155 CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr6:67357676-67357699 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from KO miR-155 CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Gstm3 (mmu)
mmu-miR-30b-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr3:107964235-107964243 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 48hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr3:107964235-107964243 (UNKNOWN)
8-10 week old male C57Bl/6 mice. 2 biological replicates for quiescent liver. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr3:107964235-107964243 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 36hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Irf1 (mmu)
mmu-miR-30b-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr11:53777312-53777324 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from KO miR-155 CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Rnf145 (mmu)
mmu-miR-30b-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr11:44565260-44565287 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from KO miR-155 CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Trnt1 (mmu)
mmu-miR-30b-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr6:106782035-106782056 (UNKNOWN)
8-10 week old male C57Bl/6 mice. 2 biological replicates for quiescent liver. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Hbp1 (mmu)
mmu-miR-30b-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr12:31937718-31937742 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 36hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr12:31937718-31937742 (UNKNOWN)
8-10 week old male C57Bl/6 mice. 2 biological replicates for quiescent liver. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Sept7 (mmu)
mmu-miR-30b-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr9:25307851-25307873 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from WT CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr9:25308076-25308085 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from WT CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr9:25288273-25288294 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from KO miR-155 CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr9:25307851-25307873 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from KO miR-155 CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Ubp1 (mmu)
mmu-miR-30b-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr9:113972845-113972852 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 1hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Smarcb1 (mmu)
mmu-miR-30b-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr10:75906168-75906194 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 48hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Arid1a (mmu)
mmu-miR-30b-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr4:133680225-133680231 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 36hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Lpcat3 (mmu)
mmu-miR-30b-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr6:124704308-124704324 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 1hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr6:124704308-124704324 (UNKNOWN)
8-10 week old male C57Bl/6 mice. 2 biological replicates for quiescent liver. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Nr2c2 (mmu)
mmu-miR-30b-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr6:92168032-92168052 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from WT CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr6:92171129-92171148 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from WT CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Klhl3 (mmu)
mmu-miR-30b-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr13:58011154-58011176 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 1hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Pnpo (mmu)
mmu-miR-30b-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr11:96938230-96938253 (UNKNOWN)
8-10 week old male C57Bl/6 mice. 2 biological replicates for quiescent liver. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Anp32e (mmu)
mmu-miR-30b-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr3:95945553-95945568 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from WT CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr3:95945553-95945568 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from KO miR-155 CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Ranbp2 (mmu)
mmu-miR-30b-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr10:58476822-58476839 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 1hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Psma2 (mmu)
mmu-miR-30b-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr13:14619329-14619353 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 36hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Fbxo11 (mmu)
mmu-miR-30b-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr17:87991752-87991774 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from WT CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
P4ha2 (mmu)
mmu-miR-30b-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr11:54131565-54131585 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from KO miR-155 CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr11:54131565-54131585 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from WT CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Hint3 (mmu)
mmu-miR-30b-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr10:30610343-30610365 (UNKNOWN)
8-10 week old male C57Bl/6 mice. 2 biological replicates for quiescent liver. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Ccnd2 (mmu)
mmu-miR-30b-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr6:127128293-127128320 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from WT CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr6:127130034-127130057 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from WT CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr6:127128293-127128320 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from KO miR-155 CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr6:127130034-127130057 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from KO miR-155 CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Gzmb (mmu)
mmu-miR-30b-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr14:56258924-56258933 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from WT CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr14:56258924-56258933 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from KO miR-155 CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Cbx5 (mmu)
mmu-miR-30b-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr15:103192768-103192791 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from KO miR-155 CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr15:103192768-103192791 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from WT CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Gramd3 (mmu)
mmu-miR-30b-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr18:56503013-56503030 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 48hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Npepps (mmu)
mmu-miR-30b-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr11:97242644-97242666 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 1hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr11:97242644-97242666 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 36hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr11:97242644-97242666 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 48hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Ccne1 (mmu)
mmu-miR-30b-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr7:38100598-38100604 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from WT CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr7:38100598-38100604 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from KO miR-155 CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Ccl3 (mmu)
mmu-miR-30b-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr11:83647878-83647895 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from KO miR-155 CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Mertk (mmu)
mmu-miR-30b-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr2:128801781-128801805 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 36hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
M6pr (mmu)
mmu-miR-30b-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr6:122317580-122317603 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from WT CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Utp20 (mmu)
mmu-miR-30b-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr10:88765482-88765503 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 1hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Taok1 (mmu)
mmu-miR-30b-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr11:77532022-77532039 (UNKNOWN)
Dicer wild-type mESC CLIP library. For immunoprecipitation, anti-mouse Ago2 mAb (lot# PEM0820 Wako 2x100ul 018-22021) was used.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr11:77532022-77532039 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from WT CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr11:77532080-77532108 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from WT CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr11:77536834-77536861 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from WT CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr11:77537713-77537734 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from WT CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr11:77532022-77532039 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from KO miR-155 CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr11:77532080-77532108 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from KO miR-155 CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr11:77536834-77536861 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from KO miR-155 CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr11:77537713-77537734 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from KO miR-155 CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr11:77532022-77532039 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 48hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr11:77532022-77532039 (UNKNOWN)
8-10 week old male C57Bl/6 mice. 2 biological replicates for quiescent liver. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr11:77532022-77532039 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 1hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Eif1b (mmu)
mmu-miR-30b-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr9:120495160-120495188 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from WT CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Dstn (mmu)
mmu-miR-30b-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr2:143942680-143942689 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from WT CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
E2f2 (mmu)
mmu-miR-30b-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr4:136194732-136194755 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from KO miR-155 CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Nbr1 (mmu)
mmu-miR-30b-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr11:101581887-101581900 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from WT CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0