Deprecated!
This application is deprecated. Please use the latest version of the tool here.
Please cite:
I. S. Vlachos, M. D. Paraskevopoulou, D. Karagkouni, G. Georgakilas, T. Vergoulis, I. Kanellos, I-L. Anastasopoulos, S. Maniou, K. Karathanou, D. Kalfakakou, A. Fevgas, T. Dalamagas and A. G. Hatzigeorgiou. DIANA-TarBase v7.0: indexing more than half a million experimentally supported miRNA:mRNA interactions. Nucl. Acids Res. (2014)
Data Download:
DIANA-TarBase v7 is available for scientific non-profit and non-commercial use! Download TarBase v7 by following this link
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Method
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Gene name
miRNA name
Methods
Pred.Score
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr13:24813390-24813406 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr1:36337026-36337035 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr1:36337026-36337035 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr16:38445520-38445543 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr11:58990595-58990620 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr2:131146803-131146813 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr2:25448014-25448021 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr9:109031351-109031379 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr4:141308869-141308890 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr19:60864426-60864451 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr10:60762979-60763003 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr19:55083271-55083294 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Prrc2a (mmu)
mmu-miR-542-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr17:35156438-35156449 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Rbm26 (mmu)
mmu-miR-542-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr14:105177261-105177286 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Pelp1 (mmu)
mmu-miR-542-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr11:70395135-70395157 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Pard3 (mmu)
mmu-miR-542-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr8:127371713-127371739 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Zfp687 (mmu)
mmu-miR-542-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr3:95012401-95012419 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr3:95012401-95012419 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Pip5k1a (mmu)
mmu-miR-542-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr3:95070776-95070792 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Celf2 (mmu)
mmu-miR-542-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr2:6546686-6546711 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Eif4g2 (mmu)
mmu-miR-542-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr7:111082839-111082847 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Psmd2 (mmu)
mmu-miR-542-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr16:20663397-20663415 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Obsl1 (mmu)
mmu-miR-542-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr1:75505397-75505425 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Dab2 (mmu)
mmu-miR-542-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr15:6435518-6435538 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Itch (mmu)
mmu-miR-542-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr2:155133553-155133580 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Sept2 (mmu)
mmu-miR-542-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr1:93479545-93479566 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Cd63 (mmu)
mmu-miR-542-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr10:128912208-128912234 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr10:128912208-128912234 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Epb4.1l3 (mmu)
mmu-miR-542-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr17:69289003-69289024 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Ppp2r5c (mmu)
mmu-miR-542-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr12:110582198-110582217 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Tmpo (mmu)
mmu-miR-542-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr10:91148525-91148550 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr10:91148525-91148550 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Ppp2r1a (mmu)
mmu-miR-542-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr17:20961648-20961676 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Myo9b (mmu)
mmu-miR-542-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr8:71359985-71360012 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Shoc2 (mmu)
mmu-miR-542-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr19:54027796-54027813 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Atn1 (mmu)
mmu-miR-542-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr6:124747868-124747891 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Gtpbp2 (mmu)
mmu-miR-542-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr17:46165567-46165591 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr17:46165567-46165591 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Kbtbd4 (mmu)
mmu-miR-542-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr2:90909941-90909954 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Zfhx4 (mmu)
mmu-miR-542-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr3:5400384-5400390 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Ptprs (mmu)
mmu-miR-542-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr17:56417352-56417370 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Aaed1 (mmu)
mmu-miR-542-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr13:64312279-64312305 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Slc29a3 (mmu)
mmu-miR-542-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr10:60750624-60750646 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Zfand5 (mmu)
mmu-miR-542-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr19:21272528-21272549 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Cbll1 (mmu)
mmu-miR-542-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr12:31488102-31488122 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Ncoa1 (mmu)
mmu-miR-542-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr12:4247778-4247797 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Slk (mmu)
mmu-miR-542-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr19:47580261-47580285 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Hspb7 (mmu)
mmu-miR-542-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr4:141424110-141424132 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Speg (mmu)
mmu-miR-542-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr1:75427626-75427650 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Myom1 (mmu)
mmu-miR-542-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr17:71126288-71126312 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Amotl1 (mmu)
mmu-miR-542-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr9:14593679-14593686 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Lyst (mmu)
mmu-miR-542-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr13:13638071-13638094 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr13:13648627-13648634 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Smarcc2 (mmu)
mmu-miR-542-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr10:128482890-128482912 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr10:128482890-128482912 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Runx1 (mmu)
mmu-miR-542-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr16:92697216-92697244 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Lox (mmu)
mmu-miR-542-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr18:52529351-52529368 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Brd1 (mmu)
mmu-miR-542-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr15:88729791-88729819 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Tcerg1 (mmu)
mmu-miR-542-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr18:42574643-42574666 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Arpp19 (mmu)
mmu-miR-542-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr9:75037916-75037937 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Slc41a1 (mmu)
mmu-miR-542-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr1:131847733-131847741 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Ccna2 (mmu)
mmu-miR-542-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr3:36571735-36571758 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Man1a2 (mmu)
mmu-miR-542-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr3:100562431-100562447 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Git1 (mmu)
mmu-miR-542-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr11:77506567-77506594 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Ylpm1 (mmu)
mmu-miR-542-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr12:85030015-85030043 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Pikfyve (mmu)
mmu-miR-542-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr1:65190337-65190355 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Hnrnpk (mmu)
mmu-miR-542-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr13:58397755-58397774 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
6030458C11Rik (mmu)
mmu-miR-542-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr15:12809741-12809768 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Ttl (mmu)
mmu-miR-542-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr2:129075884-129075907 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Camk2a (mmu)
mmu-miR-542-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr18:60963678-60963699 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Extl2 (mmu)
mmu-miR-542-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr3:116024153-116024177 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Nrp1 (mmu)
mmu-miR-542-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr8:128504313-128504333 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Cyth1 (mmu)
mmu-miR-542-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr11:118182288-118182309 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Btbd1 (mmu)
mmu-miR-542-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr7:81801070-81801091 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Ankrd28 (mmu)
mmu-miR-542-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr14:31702196-31702223 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Plec (mmu)
mmu-miR-542-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr15:76176432-76176456 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Med13l (mmu)
mmu-miR-542-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr5:118742260-118742281 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Extl3 (mmu)
mmu-miR-542-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr14:65077246-65077264 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Abcc5 (mmu)
mmu-miR-542-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr16:20405848-20405870 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Dnmt1 (mmu)
mmu-miR-542-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr9:20909810-20909837 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Pkia (mmu)
mmu-miR-542-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr3:7443832-7443856 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Smc5 (mmu)
mmu-miR-542-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr19:23273754-23273771 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Tnfrsf1b (mmu)
mmu-miR-542-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr4:145213623-145213647 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Tcf7l2 (mmu)
mmu-miR-542-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr19:55743118-55743145 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Ptrf (mmu)
mmu-miR-542-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr11:100958807-100958828 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Nfix (mmu)
mmu-miR-542-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr8:84772085-84772109 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Lrrc8a (mmu)
mmu-miR-542-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr2:30256254-30256275 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Ints2 (mmu)
mmu-miR-542-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr11:86217819-86217846 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Itgb3 (mmu)
mmu-miR-542-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr11:104668445-104668467 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Wwtr1 (mmu)
mmu-miR-542-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr3:57575729-57575752 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Gna12 (mmu)
mmu-miR-542-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr5:140759327-140759350 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Samd8 (mmu)
mmu-miR-542-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr14:21775329-21775351 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr14:21794203-21794222 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Wac (mmu)
mmu-miR-542-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr18:7918459-7918487 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr18:7918459-7918487 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Plxna2 (mmu)
mmu-miR-542-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr1:194815905-194815922 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Ptpn1 (mmu)
mmu-miR-542-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr2:167974101-167974125 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Mcm3ap (mmu)
mmu-miR-542-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr10:76471518-76471537 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr10:76471518-76471537 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Scrib (mmu)
mmu-miR-542-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr15:76048525-76048549 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Pdgfrb (mmu)
mmu-miR-542-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr18:61083863-61083888 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Efnb2 (mmu)
mmu-miR-542-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr8:8619032-8619059 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Polk (mmu)
mmu-miR-542-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr13:96482205-96482226 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Trio (mmu)
mmu-miR-542-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr15:27732911-27732931 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Gsk3b (mmu)
mmu-miR-542-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr16:38090114-38090137 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Pdk1 (mmu)
mmu-miR-542-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr2:71875479-71875505 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Atxn7l1 (mmu)
mmu-miR-542-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr12:33367253-33367273 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Igfbp6 (mmu)
mmu-miR-542-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr15:102144790-102144812 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Klf5 (mmu)
mmu-miR-542-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr14:99301671-99301689 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Gatsl2 (mmu)
mmu-miR-542-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr5:134143606-134143615 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0