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Please cite:
I. S. Vlachos, M. D. Paraskevopoulou, D. Karagkouni, G. Georgakilas, T. Vergoulis, I. Kanellos, I-L. Anastasopoulos, S. Maniou, K. Karathanou, D. Kalfakakou, A. Fevgas, T. Dalamagas and A. G. Hatzigeorgiou. DIANA-TarBase v7.0: indexing more than half a million experimentally supported miRNA:mRNA interactions. Nucl. Acids Res. (2014)
Data Download:
DIANA-TarBase v7 is available for scientific non-profit and non-commercial use! Download TarBase v7 by following this link
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Method Type
Method
Regulation type
Validation type
Validated as
Source
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Prediction score
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Gene name
miRNA name
Methods
Pred.Score
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr5:64829323-64829347 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 48hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr4:118432515-118432542 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 48hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr4:135214492-135214519 (UNKNOWN)
8-10 week old male C57Bl/6 mice. 2 biological replicates for quiescent liver. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr1:153908305-153908327 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 36hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr1:153908305-153908327 (UNKNOWN)
8-10 week old male C57Bl/6 mice. 2 biological replicates for quiescent liver. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr1:153908305-153908327 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 1hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr9:108733146-108733164 (UNKNOWN)
8-10 week old male C57Bl/6 mice. 2 biological replicates for quiescent liver. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr16:37882663-37882680 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 36hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chrX:36606036-36606057 (UNKNOWN)
8-10 week old male C57Bl/6 mice. 2 biological replicates for quiescent liver. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr10:128958639-128958663 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 36hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr10:128958639-128958663 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 48hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr19:45529086-45529106 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 48hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr8:36571305-36571324 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 36hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr8:36571305-36571324 (UNKNOWN)
8-10 week old male C57Bl/6 mice. 2 biological replicates for quiescent liver. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr14:25653381-25653407 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 1hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr2:103771745-103771773 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 1hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr6:13084438-13084460 (UNKNOWN)
8-10 week old male C57Bl/6 mice. 2 biological replicates for quiescent liver. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr11:90340557-90340582 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 36hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr4:120505438-120505464 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 1hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr13:100596792-100596820 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 36hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr2:34776283-34776302 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 36hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr4:40806141-40806168 (UNKNOWN)
8-10 week old male C57Bl/6 mice. 2 biological replicates for quiescent liver. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr4:40806167-40806182 (UNKNOWN)
8-10 week old male C57Bl/6 mice. 2 biological replicates for quiescent liver. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr5:86917477-86917494 (UNKNOWN)
8-10 week old male C57Bl/6 mice. 2 biological replicates for quiescent liver. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr2:163629144-163629163 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 48hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr5:125516564-125516586 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 1hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr5:121580683-121580704 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 36hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr4:124789159-124789186 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 48hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr2:122264579-122264600 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 1hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr6:120795478-120795499 (UNKNOWN)
8-10 week old male C57Bl/6 mice. 2 biological replicates for quiescent liver. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr1:93509500-93509522 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 48hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr1:93509500-93509522 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 1hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr10:58457695-58457719 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 48hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr10:58457695-58457719 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 36hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr13:98841886-98841913 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 36hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr11:98156214-98156242 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 1hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr11:117835741-117835763 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 36hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr11:117835741-117835763 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 1hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr14:21838466-21838492 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 48hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Birc6 (mmu)
mmu-miR-345-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr17:74648122-74648144 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 1hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr17:74660503-74660527 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 1hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Dopey1 (mmu)
mmu-miR-345-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr9:86513077-86513095 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 48hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Rif1 (mmu)
mmu-miR-345-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr2:52098364-52098390 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 1hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Cfh (mmu)
mmu-miR-345-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr1:140108537-140108554 (UNKNOWN)
8-10 week old male C57Bl/6 mice. 2 biological replicates for quiescent liver. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr1:140183209-140183226 (UNKNOWN)
8-10 week old male C57Bl/6 mice. 2 biological replicates for quiescent liver. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Slc29a1 (mmu)
mmu-miR-345-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr17:45585490-45585517 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 1hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr17:45585490-45585517 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 36hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr17:45585490-45585517 (UNKNOWN)
8-10 week old male C57Bl/6 mice. 2 biological replicates for quiescent liver. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Uggt1 (mmu)
mmu-miR-345-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr1:36142665-36142691 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 1hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Cnot2 (mmu)
mmu-miR-345-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr10:116506357-116506377 (UNKNOWN)
8-10 week old male C57Bl/6 mice. 2 biological replicates for quiescent liver. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Pcx (mmu)
mmu-miR-345-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr19:4619347-4619367 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 36hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr19:4619347-4619367 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 48hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Irf1 (mmu)
mmu-miR-345-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr11:53774141-53774163 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 48hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Lrp1 (mmu)
mmu-miR-345-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr10:127568389-127568416 (UNKNOWN)
8-10 week old male C57Bl/6 mice. 2 biological replicates for quiescent liver. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Nfatc1 (mmu)
mmu-miR-345-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr18:80697897-80697916 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 1hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr18:80697897-80697916 (UNKNOWN)
8-10 week old male C57Bl/6 mice. 2 biological replicates for quiescent liver. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Slc25a13 (mmu)
mmu-miR-345-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr6:6041264-6041289 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 36hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Zfml (mmu)
mmu-miR-345-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr6:83976413-83976436 (UNKNOWN)
8-10 week old male C57Bl/6 mice. 2 biological replicates for quiescent liver. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Tpp1 (mmu)
mmu-miR-345-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr7:105746722-105746743 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 1hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr7:105746722-105746743 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 36hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Lap3 (mmu)
mmu-miR-345-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr5:45509438-45509464 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 48hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Pef1 (mmu)
mmu-miR-345-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr4:130121371-130121393 (UNKNOWN)
8-10 week old male C57Bl/6 mice. 2 biological replicates for quiescent liver. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr4:130121371-130121393 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 36hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Tapbp (mmu)
mmu-miR-345-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr17:33926203-33926222 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 1hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Tln1 (mmu)
mmu-miR-345-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr4:43543895-43543920 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 1hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Lrg1 (mmu)
mmu-miR-345-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr17:56119977-56120005 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 36hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr17:56119977-56120005 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 48hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Optn (mmu)
mmu-miR-345-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr2:5054661-5054689 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 1hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Trak1 (mmu)
mmu-miR-345-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr9:121453324-121453346 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 36hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Zranb2 (mmu)
mmu-miR-345-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr3:157546798-157546822 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 48hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
F5 (mmu)
mmu-miR-345-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr1:164193865-164193878 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 48hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Clmn (mmu)
mmu-miR-345-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr12:104763977-104764001 (UNKNOWN)
8-10 week old male C57Bl/6 mice. 2 biological replicates for quiescent liver. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Abcc2 (mmu)
mmu-miR-345-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr19:43838652-43838675 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 48hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Lpin1 (mmu)
mmu-miR-345-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr12:16548913-16548932 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 1hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Grina (mmu)
mmu-miR-345-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr15:76248005-76248027 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 1hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Usp32 (mmu)
mmu-miR-345-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr11:85022845-85022870 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 1hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Hmox1 (mmu)
mmu-miR-345-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr8:75095934-75095955 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 1hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Slmap (mmu)
mmu-miR-345-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr14:26533515-26533539 (UNKNOWN)
8-10 week old male C57Bl/6 mice. 2 biological replicates for quiescent liver. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Raf1 (mmu)
mmu-miR-345-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr6:115626327-115626346 (UNKNOWN)
8-10 week old male C57Bl/6 mice. 2 biological replicates for quiescent liver. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr6:115631248-115631273 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 1hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Ubap1 (mmu)
mmu-miR-345-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr4:41379175-41379195 (UNKNOWN)
8-10 week old male C57Bl/6 mice. 2 biological replicates for quiescent liver. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr4:41379175-41379195 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 1hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr4:41379175-41379195 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 36hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Myh9 (mmu)
mmu-miR-345-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr15:77762972-77763000 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 36hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Wdr1 (mmu)
mmu-miR-345-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr5:38535237-38535260 (UNKNOWN)
8-10 week old male C57Bl/6 mice. 2 biological replicates for quiescent liver. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Aco1 (mmu)
mmu-miR-345-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr4:40176514-40176537 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 36hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr4:40176514-40176537 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 48hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Fam173b (mmu)
mmu-miR-345-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr15:31617357-31617384 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 1hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Sar1b (mmu)
mmu-miR-345-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr11:51789292-51789316 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 1hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Arhgap5 (mmu)
mmu-miR-345-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr12:52567389-52567408 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 36hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Ss18 (mmu)
mmu-miR-345-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr18:14633617-14633632 (UNKNOWN)
8-10 week old male C57Bl/6 mice. 2 biological replicates for quiescent liver. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Mga (mmu)
mmu-miR-345-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr2:119964766-119964785 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 36hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Dlst (mmu)
mmu-miR-345-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr12:85128370-85128388 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 1hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr12:85128370-85128388 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 36hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Noc4l (mmu)
mmu-miR-345-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr5:110649099-110649126 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 36hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr5:110649099-110649126 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 48hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr5:110649099-110649126 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 1hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Fermt2 (mmu)
mmu-miR-345-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr14:45475964-45475990 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 48hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Ncor1 (mmu)
mmu-miR-345-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr11:62367068-62367096 (UNKNOWN)
8-10 week old male C57Bl/6 mice. 2 biological replicates for quiescent liver. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Sfxn1 (mmu)
mmu-miR-345-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr13:54088984-54089008 (UNKNOWN)
8-10 week old male C57Bl/6 mice. 2 biological replicates for quiescent liver. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Inmt (mmu)
mmu-miR-345-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr6:55171185-55171209 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 36hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr6:55171185-55171209 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 48hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Nom1 (mmu)
mmu-miR-345-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr5:29442571-29442594 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 48hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Folr2 (mmu)
mmu-miR-345-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr7:101840355-101840382 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 36hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Tnrc6c (mmu)
mmu-miR-345-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr11:117722679-117722700 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 1hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Gcc2 (mmu)
mmu-miR-345-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr10:58292604-58292629 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 1hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Col1a1 (mmu)
mmu-miR-345-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr11:94947924-94947951 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 1hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Abcb6 (mmu)
mmu-miR-345-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr1:75180169-75180197 (UNKNOWN)
8-10 week old male C57Bl/6 mice. 2 biological replicates for quiescent liver. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Snx7 (mmu)
mmu-miR-345-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr3:117832988-117833007 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 1hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Hook3 (mmu)
mmu-miR-345-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr8:26073643-26073668 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 1hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Pdcd2l (mmu)
mmu-miR-345-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr7:34186316-34186337 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 1hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Dync1i2 (mmu)
mmu-miR-345-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr2:71248898-71248920 (UNKNOWN)
8-10 week old male C57Bl/6 mice. 2 biological replicates for quiescent liver. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
2610507B11Rik (mmu)
mmu-miR-345-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr11:78265688-78265714 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 1hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr11:78273494-78273512 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 36hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Nmt1 (mmu)
mmu-miR-345-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr11:103046424-103046447 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 1hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr11:103046424-103046447 (UNKNOWN)
8-10 week old male C57Bl/6 mice. 2 biological replicates for quiescent liver. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Maged1 (mmu)
mmu-miR-345-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chrX:94540143-94540170 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 48hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
H2-Aa (mmu)
mmu-miR-345-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr17:34283806-34283831 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 1hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Map2k1 (mmu)
mmu-miR-345-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr9:64193759-64193780 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 1hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Psap (mmu)
mmu-miR-345-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr10:60302188-60302206 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 48hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr10:60302188-60302206 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 1hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr10:60302188-60302206 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 36hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Supt5 (mmu)
mmu-miR-345-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr7:28320044-28320068 (UNKNOWN)
8-10 week old male C57Bl/6 mice. 2 biological replicates for quiescent liver. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Btg2 (mmu)
mmu-miR-345-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr1:134076977-134077002 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 36hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr1:134076977-134077002 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 1hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Senp2 (mmu)
mmu-miR-345-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr16:22036648-22036669 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 36hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Ythdf2 (mmu)
mmu-miR-345-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr4:132205490-132205512 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 1hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr4:132204953-132204980 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 36hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr4:132204953-132204980 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 48hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Eng (mmu)
mmu-miR-345-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr2:32673374-32673396 (UNKNOWN)
8-10 week old male C57Bl/6 mice. 2 biological replicates for quiescent liver. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Acp2 (mmu)
mmu-miR-345-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr2:91203665-91203688 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 1hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Rarg (mmu)
mmu-miR-345-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr15:102241854-102241882 (UNKNOWN)
8-10 week old male C57Bl/6 mice. 2 biological replicates for quiescent liver. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0