Deprecated!
This application is deprecated. Please use the latest version of the tool here.
Please cite:
I. S. Vlachos, M. D. Paraskevopoulou, D. Karagkouni, G. Georgakilas, T. Vergoulis, I. Kanellos, I-L. Anastasopoulos, S. Maniou, K. Karathanou, D. Kalfakakou, A. Fevgas, T. Dalamagas and A. G. Hatzigeorgiou. DIANA-TarBase v7.0: indexing more than half a million experimentally supported miRNA:mRNA interactions. Nucl. Acids Res. (2014)
Data Download:
DIANA-TarBase v7 is available for scientific non-profit and non-commercial use! Download TarBase v7 by following this link
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Method Type
Method
Regulation type
Validation type
Validated as
Source
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Prediction score
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Gene name
miRNA name
Methods
Pred.Score
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr11:117761068-117761085 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from KO miR-155 CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr11:117761068-117761085 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from WT CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr15:12184572-12184599 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from KO miR-155 CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr15:12184572-12184599 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from WT CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr5:118765198-118765217 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr11:94663896-94663920 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr16:33497422-33497447 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from WT CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr8:105329345-105329373 (UNKNOWN)
Dicer wild-type mESC CLIP library. For immunoprecipitation, anti-mouse Ago2 mAb (lot# PEM0820 Wako 2x100ul 018-22021) was used.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr2:181549542-181549555 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from WT CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr2:181549542-181549555 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from KO miR-155 CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr11:94340032-94340056 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr8:105279203-105279229 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr6:51462819-51462831 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from WT CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr6:51462819-51462831 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from KO miR-155 CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Ube2i (mmu)
mmu-miR-106b-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr17:25272653-25272673 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Itga3 (mmu)
mmu-miR-106b-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr11:95057159-95057187 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Wdr77 (mmu)
mmu-miR-106b-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr3:105967522-105967548 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr3:105967522-105967548 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Xpo6 (mmu)
mmu-miR-106b-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr7:126113741-126113762 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Hr (mmu)
mmu-miR-106b-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr14:70566426-70566449 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Rgs19 (mmu)
mmu-miR-106b-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr2:181688649-181688661 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Atp2b4 (mmu)
mmu-miR-106b-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr1:133730453-133730479 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Trmt10a (mmu)
mmu-miR-106b-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr3:138156979-138157005 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Zeb2 (mmu)
mmu-miR-106b-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr2:45095565-45095592 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr2:45095894-45095913 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Prepl (mmu)
mmu-miR-106b-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr17:85075876-85075896 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Nedd9 (mmu)
mmu-miR-106b-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr13:41312020-41312046 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Ptprc (mmu)
mmu-miR-106b-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr1:138064158-138064180 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from KO miR-155 CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Rprd1b (mmu)
mmu-miR-106b-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr2:158076796-158076816 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Akap11 (mmu)
mmu-miR-106b-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr14:78513266-78513287 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Sptbn1 (mmu)
mmu-miR-106b-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr11:30099976-30099996 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from WT CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr11:30099976-30099996 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from KO miR-155 CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Luzp1 (mmu)
mmu-miR-106b-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr4:136543196-136543218 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Trip13 (mmu)
mmu-miR-106b-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr13:73913176-73913197 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from WT CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr13:73913176-73913197 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr13:73913176-73913197 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Rtn4 (mmu)
mmu-miR-106b-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr11:29692974-29693002 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Tubb5 (mmu)
mmu-miR-106b-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr17:35835954-35835973 (UNKNOWN)
Dicer wild-type mESC CLIP library. For immunoprecipitation, anti-mouse Ago2 mAb (lot# PEM0820 Wako 2x100ul 018-22021) was used.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr17:35835954-35835973 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from WT CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Cic (mmu)
mmu-miR-106b-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr7:25292255-25292276 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Tmed4 (mmu)
mmu-miR-106b-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr11:6271544-6271566 (UNKNOWN)
Dicer wild-type mESC CLIP library. For immunoprecipitation, anti-mouse Ago2 mAb (lot# PEM0820 Wako 2x100ul 018-22021) was used.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Pcdhga12 (mmu)
mmu-miR-106b-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr18:37807395-37807423 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Zfhx4 (mmu)
mmu-miR-106b-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr3:5400511-5400539 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Brpf1 (mmu)
mmu-miR-106b-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr6:113318570-113318587 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Rmnd5a (mmu)
mmu-miR-106b-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr6:71429111-71429131 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Sod2 (mmu)
mmu-miR-106b-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr17:13015891-13015908 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Glrx (mmu)
mmu-miR-106b-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr13:75840113-75840136 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Cenpl (mmu)
mmu-miR-106b-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr1:161083105-161083132 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Golga1 (mmu)
mmu-miR-106b-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr2:39016634-39016651 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from WT CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr2:39016634-39016651 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from KO miR-155 CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Usf1 (mmu)
mmu-miR-106b-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr1:171415516-171415542 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Bnip2 (mmu)
mmu-miR-106b-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr9:70008103-70008121 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Ptbp1 (mmu)
mmu-miR-106b-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr10:79862671-79862698 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Epc1 (mmu)
mmu-miR-106b-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr18:6436849-6436870 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from KO miR-155 CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Smad2 (mmu)
mmu-miR-106b-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr18:76304688-76304711 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Rin1 (mmu)
mmu-miR-106b-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr19:5051379-5051407 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr19:5053635-5053658 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Ppp6r3 (mmu)
mmu-miR-106b-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr19:3486998-3487024 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Baiap2 (mmu)
mmu-miR-106b-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr11:119993787-119993813 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Ttc33 (mmu)
mmu-miR-106b-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr15:5217879-5217899 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Enpp4 (mmu)
mmu-miR-106b-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr17:44097297-44097317 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Rhobtb3 (mmu)
mmu-miR-106b-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr13:75943249-75943271 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Smarcc2 (mmu)
mmu-miR-106b-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr10:128459382-128459410 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Slmap (mmu)
mmu-miR-106b-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr14:26414889-26414910 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Trip11 (mmu)
mmu-miR-106b-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr12:101837580-101837604 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Dcp2 (mmu)
mmu-miR-106b-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr18:44395978-44396001 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from WT CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Ptdss1 (mmu)
mmu-miR-106b-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr13:66997314-66997335 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Kpna4 (mmu)
mmu-miR-106b-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr3:69069705-69069732 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr3:69069705-69069732 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Slc25a25 (mmu)
mmu-miR-106b-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr2:32416516-32416541 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Strn (mmu)
mmu-miR-106b-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr17:78652292-78652314 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Zim1 (mmu)
mmu-miR-106b-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr7:6677335-6677354 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Spopl (mmu)
mmu-miR-106b-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr2:23515187-23515207 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from KO miR-155 CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Bcl6 (mmu)
mmu-miR-106b-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr16:23972769-23972795 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from WT CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr16:23972769-23972795 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from KO miR-155 CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Pxdn (mmu)
mmu-miR-106b-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr12:29988411-29988438 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Esrra (mmu)
mmu-miR-106b-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr19:6911525-6911544 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr19:6911525-6911544 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Ahsa2 (mmu)
mmu-miR-106b-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr11:23488637-23488655 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr11:23488637-23488655 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Mif4gd (mmu)
mmu-miR-106b-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr11:115608397-115608417 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from WT CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr11:115608397-115608417 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from KO miR-155 CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Tbl2 (mmu)
mmu-miR-106b-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr5:135161479-135161499 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Plec (mmu)
mmu-miR-106b-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr15:76181221-76181242 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
D10Wsu102e (mmu)
mmu-miR-106b-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr10:83362089-83362117 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from WT CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Mapk9 (mmu)
mmu-miR-106b-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr11:49854275-49854299 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Mast2 (mmu)
mmu-miR-106b-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr4:116310951-116310973 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Fam98b (mmu)
mmu-miR-106b-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr2:117263892-117263910 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Pabpc1 (mmu)
mmu-miR-106b-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr15:36608939-36608961 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Pigq (mmu)
mmu-miR-106b-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr17:25934216-25934237 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Dnmt1 (mmu)
mmu-miR-106b-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr9:20917326-20917347 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from KO miR-155 CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Xiap (mmu)
mmu-miR-106b-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chrX:42104888-42104913 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chrX:42107696-42107709 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Fam129b (mmu)
mmu-miR-106b-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr2:32923983-32924006 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Son (mmu)
mmu-miR-106b-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr16:91659084-91659105 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Vangl2 (mmu)
mmu-miR-106b-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr1:172001763-172001781 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Vcan (mmu)
mmu-miR-106b-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr13:89693343-89693364 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Wwtr1 (mmu)
mmu-miR-106b-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr3:57455857-57455877 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr3:57455857-57455877 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Cep97 (mmu)
mmu-miR-106b-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr16:55915123-55915143 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Fhl2 (mmu)
mmu-miR-106b-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr1:43123066-43123083 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Mpp5 (mmu)
mmu-miR-106b-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr12:78797152-78797175 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Rhoq (mmu)
mmu-miR-106b-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr17:86997345-86997364 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from KO miR-155 CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Sept8 (mmu)
mmu-miR-106b-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr11:53548975-53548995 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Ptpn4 (mmu)
mmu-miR-106b-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr1:119655191-119655212 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Cblb (mmu)
mmu-miR-106b-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr16:52206680-52206694 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from KO miR-155 CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr16:52206680-52206694 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from WT CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Myo10 (mmu)
mmu-miR-106b-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr15:25812706-25812727 (UNKNOWN)
Dicer wild-type mESC CLIP library. For immunoprecipitation, anti-mouse Ago2 mAb (lot# PEM0820 Wako 2x100ul 018-22021) was used.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Eif4e2 (mmu)
mmu-miR-106b-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr1:87238727-87238749 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Bmi1 (mmu)
mmu-miR-106b-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr2:18686172-18686181 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Cct4 (mmu)
mmu-miR-106b-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr11:23002885-23002906 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from WT CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Gdf11 (mmu)
mmu-miR-106b-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr10:128885294-128885316 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Pdk1 (mmu)
mmu-miR-106b-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr2:71903813-71903835 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from WT CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Trip12 (mmu)
mmu-miR-106b-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr1:84743918-84743937 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from WT CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Atxn7 (mmu)
mmu-miR-106b-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr14:14103849-14103875 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Sik1 (mmu)
mmu-miR-106b-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr17:31845661-31845685 (UNKNOWN)
In vitro activated CD4+ T cells from spleen and lymph nodes. AGO immunoprecipitation was performed with a polyclonal antibody generated against an Argonaute 2 N-terminal peptide. 12 HITS-CLIP libraries from KO miR-155 CD4+ cells.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Tnfrsf10b (mmu)
mmu-miR-106b-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr14:69782541-69782561 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Golga2 (mmu)
mmu-miR-106b-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr2:32304150-32304171 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Mef2d (mmu)
mmu-miR-106b-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr3:88171001-88171025 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myoblasts. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Rarg (mmu)
mmu-miR-106b-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr15:102257448-102257471 (UNKNOWN)
2 libraries from Ago2-RN complex in C2C12 myotubes. AGO immunoprecipitation with monoclonal anti-EIF2C2 antibody.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0