Deprecated!
This application is deprecated. Please use the latest version of the tool here.
Please cite:
I. S. Vlachos, M. D. Paraskevopoulou, D. Karagkouni, G. Georgakilas, T. Vergoulis, I. Kanellos, I-L. Anastasopoulos, S. Maniou, K. Karathanou, D. Kalfakakou, A. Fevgas, T. Dalamagas and A. G. Hatzigeorgiou. DIANA-TarBase v7.0: indexing more than half a million experimentally supported miRNA:mRNA interactions. Nucl. Acids Res. (2014)
Data Download:
DIANA-TarBase v7 is available for scientific non-profit and non-commercial use! Download TarBase v7 by following this link
|
||||||||
Related Pathways
Publication year
Prediction score
Filters
Selected:
Species: -
Regulation: -
Validation: -
Validated: -
Sources: -
Methods: -
Species: -
Regulation: -
Validation: -
Validated: -
Sources: -
Methods: -
Remove all 
Species
Method Type
Method
Regulation type
Validation type
Validated as
Source
Publication year
Prediction score
Loading... |
| Wait until the result set is completed... |
Gene name
miRNA name
Methods
Pred.Score
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr9:75057083-75057102 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 48hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr15:58048132-58048158 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 1hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr4:117128839-117128866 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 1hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chrX:38435424-38435442 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 36hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr11:117762141-117762162 (UNKNOWN)
Dicer wild-type mESC CLIP library. For immunoprecipitation, anti-mouse Ago2 mAb (lot# PEM0820 Wako 2x100ul 018-22021) was used.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr19:36890931-36890953 (UNKNOWN)
Dicer wild-type mESC CLIP library. For immunoprecipitation, anti-mouse Ago2 mAb (lot# PEM0820 Wako 2x100ul 018-22021) was used.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr13:64363909-64363928 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 1hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr13:64363909-64363928 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 36hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr5:110785700-110785726 (UNKNOWN)
8-10 week old male C57Bl/6 mice. 2 biological replicates for quiescent liver. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr13:98841353-98841375 (UNKNOWN)
8-10 week old male C57Bl/6 mice. 2 biological replicates for quiescent liver. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr13:98852907-98852929 (UNKNOWN)
8-10 week old male C57Bl/6 mice. 2 biological replicates for quiescent liver. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr16:16490534-16490556 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 1hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr15:99408596-99408616 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 36hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr15:99408596-99408616 (UNKNOWN)
8-10 week old male C57Bl/6 mice. 2 biological replicates for quiescent liver. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr3:22213866-22213874 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 36hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr13:55318079-55318099 (UNKNOWN)
Dicer wild-type mESC CLIP library. For immunoprecipitation, anti-mouse Ago2 mAb (lot# PEM0820 Wako 2x100ul 018-22021) was used.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr6:108666409-108666428 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 1hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr6:108666409-108666428 (UNKNOWN)
8-10 week old male C57Bl/6 mice. 2 biological replicates for quiescent liver. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr5:77283703-77283725 (UNKNOWN)
Dicer wild-type mESC CLIP library. For immunoprecipitation, anti-mouse Ago2 mAb (lot# PEM0820 Wako 2x100ul 018-22021) was used.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr6:87076338-87076362 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 1hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr13:110400621-110400642 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 36hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr16:36033880-36033906 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 1hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr2:39194849-39194876 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 1hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr11:74817697-74817714 (UNKNOWN)
Dicer wild-type mESC CLIP library. For immunoprecipitation, anti-mouse Ago2 mAb (lot# PEM0820 Wako 2x100ul 018-22021) was used.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr11:121242570-121242597 (UNKNOWN)
8-10 week old male C57Bl/6 mice. 2 biological replicates for quiescent liver. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr7:102459415-102459438 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 48hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr10:68097984-68098012 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 1hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr2:131026374-131026397 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 36hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr3:51250478-51250505 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 1hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr11:106780865-106780871 (UNKNOWN)
Dicer wild-type mESC CLIP library. For immunoprecipitation, anti-mouse Ago2 mAb (lot# PEM0820 Wako 2x100ul 018-22021) was used.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr6:122888333-122888357 (UNKNOWN)
8-10 week old male C57Bl/6 mice. 2 biological replicates for quiescent liver. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr12:40203429-40203445 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 1hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr11:99051918-99051938 (UNKNOWN)
8-10 week old male C57Bl/6 mice. 2 biological replicates for quiescent liver. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr12:85118539-85118557 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 48hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr15:33032578-33032597 (UNKNOWN)
8-10 week old male C57Bl/6 mice. 2 biological replicates for quiescent liver. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr11:98154263-98154285 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 36hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr1:155202119-155202143 (UNKNOWN)
8-10 week old male C57Bl/6 mice. 2 biological replicates for quiescent liver. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr4:49536640-49536659 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 48hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr4:49536640-49536659 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 1hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr1:153908349-153908372 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 36hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr1:191831548-191831574 (UNKNOWN)
Dicer wild-type mESC CLIP library. For immunoprecipitation, anti-mouse Ago2 mAb (lot# PEM0820 Wako 2x100ul 018-22021) was used.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr11:100371286-100371307 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 48hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr11:100371286-100371307 (UNKNOWN)
8-10 week old male C57Bl/6 mice. 2 biological replicates for quiescent liver. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr2:158477713-158477735 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 36hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr1:118684762-118684789 (UNKNOWN)
Dicer wild-type mESC CLIP library. For immunoprecipitation, anti-mouse Ago2 mAb (lot# PEM0820 Wako 2x100ul 018-22021) was used.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chrX:53021190-53021217 (UNKNOWN)
8-10 week old male C57Bl/6 mice. 2 biological replicates for quiescent liver. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr12:80110000-80110020 (UNKNOWN)
8-10 week old male C57Bl/6 mice. 2 biological replicates for quiescent liver. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr11:69967846-69967853 (UNKNOWN)
Dicer wild-type mESC CLIP library. For immunoprecipitation, anti-mouse Ago2 mAb (lot# PEM0820 Wako 2x100ul 018-22021) was used.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr11:87980419-87980439 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 48hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr12:84431884-84431912 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 48hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr12:84431884-84431912 (UNKNOWN)
8-10 week old male C57Bl/6 mice. 2 biological replicates for quiescent liver. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr11:59833079-59833099 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 48hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr11:71009000-71009020 (UNKNOWN)
Dicer wild-type mESC CLIP library. For immunoprecipitation, anti-mouse Ago2 mAb (lot# PEM0820 Wako 2x100ul 018-22021) was used.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr17:71249655-71249676 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 1hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr5:29785577-29785601 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 1hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr7:45475096-45475123 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 48hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr12:8792966-8792991 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 48hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr1:67123058-67123080 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 36hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr6:35512137-35512160 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 1hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr3:86996179-86996201 (UNKNOWN)
8-10 week old male C57Bl/6 mice. 2 biological replicates for quiescent liver. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr19:30131738-30131761 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 1hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr19:44305220-44305241 (UNKNOWN)
Dicer wild-type mESC CLIP library. For immunoprecipitation, anti-mouse Ago2 mAb (lot# PEM0820 Wako 2x100ul 018-22021) was used.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Lig3 (mmu)
mmu-miR-320-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr11:82790172-82790195 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 36hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Cux1 (mmu)
mmu-miR-320-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr5:136273942-136273965 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 1hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
chr5:136273960-136273982 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 1hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr5:136273942-136273965 (UNKNOWN)
8-10 week old male C57Bl/6 mice. 2 biological replicates for quiescent liver. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Rnf4 (mmu)
mmu-miR-320-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr5:34351713-34351738 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 36hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Dab2 (mmu)
mmu-miR-320-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr15:6438863-6438883 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 1hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Maf1 (mmu)
mmu-miR-320-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr15:76352474-76352496 (UNKNOWN)
8-10 week old male C57Bl/6 mice. 2 biological replicates for quiescent liver. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Spg7 (mmu)
mmu-miR-320-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr8:123077899-123077920 (UNKNOWN)
Dicer wild-type mESC CLIP library. For immunoprecipitation, anti-mouse Ago2 mAb (lot# PEM0820 Wako 2x100ul 018-22021) was used.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Sec16a (mmu)
mmu-miR-320-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr2:26441834-26441861 (UNKNOWN)
8-10 week old male C57Bl/6 mice. 2 biological replicates for quiescent liver. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Pcmt1 (mmu)
mmu-miR-320-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr10:7629509-7629536 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 1hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Ppat (mmu)
mmu-miR-320-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr5:76914471-76914478 (UNKNOWN)
Dicer wild-type mESC CLIP library. For immunoprecipitation, anti-mouse Ago2 mAb (lot# PEM0820 Wako 2x100ul 018-22021) was used.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Per3 (mmu)
mmu-miR-320-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr4:151005317-151005343 (UNKNOWN)
8-10 week old male C57Bl/6 mice. 2 biological replicates for quiescent liver. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Luzp1 (mmu)
mmu-miR-320-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr4:136542300-136542328 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 48hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Ubtf (mmu)
mmu-miR-320-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr11:102306682-102306705 (UNKNOWN)
8-10 week old male C57Bl/6 mice. 2 biological replicates for quiescent liver. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Slc40a1 (mmu)
mmu-miR-320-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr1:45909562-45909585 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 36hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr1:45909562-45909585 (UNKNOWN)
8-10 week old male C57Bl/6 mice. 2 biological replicates for quiescent liver. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr1:45909562-45909585 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 1hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Cald1 (mmu)
mmu-miR-320-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr6:34773950-34773978 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 1hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Ak4 (mmu)
mmu-miR-320-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr4:101466027-101466050 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 48hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Nfe2l2 (mmu)
mmu-miR-320-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr2:75678522-75678544 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 48hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Cpn2 (mmu)
mmu-miR-320-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr16:30256552-30256579 (UNKNOWN)
8-10 week old male C57Bl/6 mice. 2 biological replicates for quiescent liver. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr16:30256552-30256579 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 1hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr16:30256552-30256579 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 36hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Prkag2 (mmu)
mmu-miR-320-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr5:24873885-24873908 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 1hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Pemt (mmu)
mmu-miR-320-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr11:59976871-59976893 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 36hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Fcna (mmu)
mmu-miR-320-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr2:25625004-25625031 (UNKNOWN)
8-10 week old male C57Bl/6 mice. 2 biological replicates for quiescent liver. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Thoc3 (mmu)
mmu-miR-320-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr13:54467934-54467961 (UNKNOWN)
8-10 week old male C57Bl/6 mice. 2 biological replicates for quiescent liver. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Pag1 (mmu)
mmu-miR-320-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr3:9688090-9688111 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 36hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr3:9688090-9688111 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 48hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Oxct1 (mmu)
mmu-miR-320-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr15:4037110-4037133 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 1hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Utp11l (mmu)
mmu-miR-320-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr4:124678936-124678954 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 1hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Sparc (mmu)
mmu-miR-320-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr11:55395247-55395270 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 1hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Erlin1 (mmu)
mmu-miR-320-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr19:44059093-44059114 (UNKNOWN)
8-10 week old male C57Bl/6 mice. 2 biological replicates for quiescent liver. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr19:44059093-44059114 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 36hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr19:44059093-44059114 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 48hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Fastk (mmu)
mmu-miR-320-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr5:24444029-24444047 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 48hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Nucb1 (mmu)
mmu-miR-320-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr7:45493845-45493866 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 1hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr7:45493845-45493866 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 48hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Keg1 (mmu)
mmu-miR-320-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr19:12719542-12719570 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 1hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Fn1 (mmu)
mmu-miR-320-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr1:71629407-71629429 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 1hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Pon1 (mmu)
mmu-miR-320-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr6:5177373-5177397 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 36hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Ubr2 (mmu)
mmu-miR-320-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr17:46930307-46930331 (UNKNOWN)
8-10 week old male C57Bl/6 mice. 2 biological replicates for quiescent liver. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Xdh (mmu)
mmu-miR-320-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr17:73915681-73915706 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 36hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Rhpn2 (mmu)
mmu-miR-320-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr7:35385403-35385425 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 48hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Xiap (mmu)
mmu-miR-320-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chrX:42108049-42108069 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 1hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Ppp3cb (mmu)
mmu-miR-320-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr14:20524453-20524479 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 48hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Tef (mmu)
mmu-miR-320-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr15:81815175-81815192 (UNKNOWN)
8-10 week old male C57Bl/6 mice. 2 biological replicates for quiescent liver. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Etfdh (mmu)
mmu-miR-320-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr3:79615062-79615089 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 1hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Micu1 (mmu)
mmu-miR-320-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr10:59839730-59839753 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 1hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Snapc1 (mmu)
mmu-miR-320-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr12:73967936-73967961 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 48hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr12:73967936-73967961 (UNKNOWN)
8-10 week old male C57Bl/6 mice. 2 biological replicates for quiescent liver. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Tspan12 (mmu)
mmu-miR-320-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr6:21772354-21772378 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 36hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Fam107b (mmu)
mmu-miR-320-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr2:3780618-3780642 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 1hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Fasn (mmu)
mmu-miR-320-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr11:120809886-120809913 (UNKNOWN)
8-10 week old male C57Bl/6 mice. 2 biological replicates for quiescent liver. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Zkscan1 (mmu)
mmu-miR-320-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr5:138102232-138102258 (UNKNOWN)
8-10 week old male C57Bl/6 mice underwent partial hepatectomy using isofluorane anesthesia between 8 AM and noon, and livers were harvested at the indicated time points after partial hepatectomy. 2 biological replicates for the 1hr timepoint. HITS-CLIP was performed using the monoclonal argonaute antibody 2A8
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Slc15a4 (mmu)
mmu-miR-320-3p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr5:127595762-127595785 (UNKNOWN)
Dicer wild-type mESC CLIP library. For immunoprecipitation, anti-mouse Ago2 mAb (lot# PEM0820 Wako 2x100ul 018-22021) was used.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0