DIANA TOOLS - MicroT-CDS

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Results: 1 targets of miRNAs hsa-miR-9-5p

found in genes ENSG00000119547

. Threshold is set to 0.

Name:	hsa-miR-9-5p
Alternative description:	MIMAT0000441
Related names:
miRNA sequence:	ucuuugguuaucuagcuguauga
External links:	miRBase
DIANA resources:	microT-CDS
Related diseases:	Adenocarcinoma Adenoma Alzheimer Disease Azoospermia Bites and Stings Brain Neoplasms Burkitt Lymphoma Carcinoma, Hepatocellular Carcinoma, Non-Small-Cell Lung Carcinoma, Renal Cell Carcinoma, Squamous Cell Cell Transformation, Neoplastic Cerebellar Neoplasms Chromosome Aberrations Colonic Neoplasms Colonic Polyps Colorectal Neoplasms Diabetes Mellitus Disease Models, Animal Disease Progression Disorders of Sex Development Echinococcosis Facial Neoplasms Genomic Instability Glioblastoma Glioma Hematologic Neoplasms Hodgkin Disease Huntington Disease Kidney Failure, Chronic Kidney Neoplasms Leukemia, Myeloid, Acute Liver Neoplasms Lung Neoplasms Lymphatic Metastasis Lymphoma, Follicular Lymphoma, Large B-Cell, Diffuse Medulloblastoma Melanoma Mesothelioma Mouth Neoplasms Neoplasm Invasiveness Neoplasm Metastasis Neoplasm Recurrence, Local Neoplasms Neoplasms, Experimental Nerve Sheath Neoplasms Neuralgia Neuroblastoma Ovarian Neoplasms Postmortem Changes Stomach Neoplasms Translocation, Genetic Waldenstrom Macroglobulinemia

Gene ID:	ONECUT2
Expression:	K562,MCF-7,HepG2,HeLa-S3,pancreas,liver,duodenum,gall bladder
External Gene ID:	ENSG00000119547
Description:
Chromosome:	18
DIANA resources:	microT v4 microT-CDS

Ensembl Gene Id

miRNA name

miTG score

Also Predicted

ENSG00000119547 (ONECUT2)

hsa-miR-9-5p

0.999999984037541

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

131-136

0.00495954626576137

Position on chromosome:

18:55144087-55144092

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	GAUUUGAAAGCACAAUUCUCUUG______	3'
		_______________________CAAAGA
		_______________________\|\|\|\|\|\|
		_______________________GUUUCU
(miRNA)	3'	______________________G______	5'

UTR3

8mer

1265-1279

0.0407701722619312

Position on chromosome:

18:55145221-55145235

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	CAUCUGGAGAAAAC_____AC____________	3'
		______________ACAGC______ACCAAAGA
		______________\|\|\|\|\|______\|\|\|\|\|\|\|\|
		______________UGUCG______UGGUUUCU
(miRNA)	3'	_____________A_____AUCUAU________	5'

UTR3

9mer

1286-1302

0.0124728515550143

Position on chromosome:

18:55145242-55145258

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,monDom5

Binding area:

(Transcript)	5'	CAAAGAAGCAGA____U__A_____________	3'
		____________AUAC_GC_____AACCAAAGA
		____________\|\|\|\|_\|\|_____\|\|\|\|\|\|\|\|\|
		____________UAUG_CG_____UUGGUUUCU
(miRNA)	3'	___________G____U__AUCUA_________	5'

UTR3

9mer

1650-1677

0.0666624468376023

Position on chromosome:

18:55145606-55145633

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2,tetNig2,fr2

Binding area:

(Transcript)	5'	U_____AAU__C____UCGA_________	3'
		_UUAUG___UA_UUAG____AACCAAAGA
		_\|.\|\|.___.\|_.\|\|\|____\|\|\|\|\|\|\|\|\|
		_AGUAU___GU_GAUC____UUGGUUUCU
(miRNA)	3'	___________C____UA___________	5'

UTR3

8mer

2018-2039

0.0697880582030051

Position on chromosome:

18:55145974-55145995

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,monDom5,galGal3,xenTro2,tetNig2,fr2,danRer6

Binding area:

(Transcript)	5'	AGAAACC___________CAAU________	3'
		_______UCA_ACAGCUA____ACCAAAGA
		_______\|\|\|_\|\|\|\|\|\|\|____\|\|\|\|\|\|\|\|
		_______AGU_UGUCGAU____UGGUUUCU
(miRNA)	3'	__________A_______CUAU________	5'

UTR3

9mer

2440-2456

0.023374126583047

Position on chromosome:

18:55146396-55146412

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,echTel1

Binding area:

(Transcript)	5'	CAUCCUCUCCCG___CACAG_________	3'
		____________AGC_____AACCAAAGA
		____________\|\|\|_____\|\|\|\|\|\|\|\|\|
		____________UCG_____UUGGUUUCU
(miRNA)	3'	___________G___AUCUA_________	5'

UTR3

7mer

3128-3150

0.00191669968025693

Position on chromosome:

18:55147084-55147106

Conserved species:

panTro2,rheMac2,oryCun2

Binding area:

(Transcript)	5'	ACCCCC___GUG________CC________	3'
		______UCA___AGC_AGGU__ACCAAAGG
		______\|\|\|___\|\|\|_\|\|.\|__\|\|\|\|\|\|\|.
		______AGU___UCG_UCUA__UGGUUUCU
(miRNA)	3'	_________AUG___A____U_________	5'

UTR3

7mer

4915-4941

0.00406213420657323

Position on chromosome:

18:55148871-55148897

Conserved species:

panTro2,rheMac2,dasNov2

Binding area:

(Transcript)	5'	A___U_U___U___UAUCAUU_______U	3'
		_AUG_C_GUU_GAU_______ACCAAAG_
		_\|\|._\|_\|.\|_\|\|\|_______\|\|\|\|\|\|\|_
		_UAU_G_CGA_CUA_______UGGUUUC_
(miRNA)	3'	G_____U___U___U_____________U	5'

UTR3

7mer

6353-6377

0.012097560935295

Position on chromosome:

18:55150309-55150333

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,galGal3,xenTro2

Binding area:

(Transcript)	5'	UUUU_____ACUAA_____AAU_________	3'
		____UCAUA_____AGCUA_____CCAAAGA
		____\|\|\|\|\|_____\|\|\|\|\|_____\|\|\|\|\|\|\|
		____AGUAU_____UCGAU_____GGUUUCU
(miRNA)	3'	_________G_________CUAUU_______	5'

UTR3

9mer

7505-7528

0.031921660317271

Position on chromosome:

18:55151461-55151484

Conserved species:

panTro2,rheMac2,mm9,bosTau4,canFam2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	AACUU______UU____UGAG_________	3'
		_____UC_UAU__CUAG____AACCAAAGA
		_____\|\|_\|\|.__\|\|\|\|____\|\|\|\|\|\|\|\|\|
		_____AG_AUG__GAUC____UUGGUUUCU
(miRNA)	3'	_______U___UC____UA___________	5'

UTR3

8mer

7566-7586

0.0214221549063081

Position on chromosome:

18:55151522-55151542

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,monDom5,galGal3,xenTro2,fr2,danRer6

Binding area:

(Transcript)	5'	AAUUUUAA______U________AC________	3'
		________UCGUGU_____GAUG__ACCAAAGA
		________\|\|.\|.._____\|\|\|.__\|\|\|\|\|\|\|\|
		________AGUAUG_____CUAU__UGGUUUCU
(miRNA)	3'	______________UCGAU______________	5'

UTR3

8mer

7577-7595

0.0180181246039068

Position on chromosome:

18:55151533-55151551

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,monDom5,galGal3,xenTro2,fr2,danRer6

Binding area:

(Transcript)	5'	CGUGUUGAUG___CCAA_____________	3'
		__________ACA____AGAU_ACCAAAGA
		__________\|\|\|____\|\|\|\|_\|\|\|\|\|\|\|\|
		__________UGU____UCUA_UGGUUUCU
(miRNA)	3'	_________A___CGA_____U________	5'

UTR3

7mer

7673-7698

0.0101562523295376

Position on chromosome:

18:55151629-55151654

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,monDom5,galGal3,xenTro2

Binding area:

(Transcript)	5'	GUA__GCC______C_____CC_______	3'
		___CA___ACAGCU_AGAUA__CCAAAGA
		___\|\|___\|\|\|\|\|\|_\|\|\|\|\|__\|\|\|\|\|\|\|
		___GU___UGUCGA_UCUAU__GGUUUCU
(miRNA)	3'	__A__A______________U________	5'

UTR3

6mer

8851-8874

0.00220293954417277

Position on chromosome:

18:55152807-55152830

Conserved species:

panTro2,rheMac2,oryCun2,canFam2

Binding area:

(Transcript)	5'	ACCAA___G_UU_____CAA_UG______	3'
		_____AUG_G__UUAGA___A__CAAAGA
		_____\|\|._.__.\|\|\|\|___\|__\|\|\|\|\|\|
		_____UAU_U__GAUCU___U__GUUUCU
(miRNA)	3'	____G___G_C______A___UG______	5'

UTR3

7mer

9170-9197

0.00316079673826595

Position on chromosome:

18:55153126-55153153

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	G__A__CU__A___CCUUCCUU_______	3'
		_CA_AC__GU_AGG________CCAAAGA
		_\|\|_\|\|__\|._\|\|.________\|\|\|\|\|\|\|
		_GU_UG__CG_UCU________GGUUUCU
(miRNA)	3'	A__A__U___A___AUU____________	5'

UTR3

6mer

9246-9273

0.000660986016564866

Position on chromosome:

18:55153202-55153229

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	C___GAAUCC_____A___AGAG______	3'
		_UCA______CUGGG_GAC____CAAAGA
		_\|\|\|______\|\|.\|._.\|\|____\|\|\|\|\|\|
		_AGU______GAUCU_UUG____GUUUCU
(miRNA)	3'	____AUGUC______A_____________	5'

UTR3

8mer

9478-9497

0.0209620605584145

Position on chromosome:

18:55153434-55153453

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,xenTro2,tetNig2,danRer6

Binding area:

(Transcript)	5'	CGGGACGA____CUU___UG__________C	3'
		________GUGC___GCU____AACCAAAG_
		________.\|.\|___\|\|\|____\|\|\|\|\|\|\|\|_
		________UAUG___CGA____UUGGUUUC_
(miRNA)	3'	_______G____U_____UCUA________U	5'

UTR3

6mer

9618-9634

0.00220919922223379

Position on chromosome:

18:55153574-55153590

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,canFam2,dasNov2,loxAfr3,echTel1,monDom5,fr2,danRer6

Binding area:

(Transcript)	5'	UGGUGCUUUGCA_____ACC_______________	3'
		____________AUGCA___CUG______CAAAGA
		____________\|\|.\|\|___\|\|.______\|\|\|\|\|\|
		____________UAUGU___GAU______GUUUCU
(miRNA)	3'	___________G_____C_____CUAUUG______	5'

UTR3

7mer

9635-9659

0.00412592321838788

Position on chromosome:

18:55153591-55153615

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,xenTro2,danRer6

Binding area:

(Transcript)	5'	AAGA__________UUGUACUAAU________	3'
		____ACA___AGAU__________ACCAAAGG
		____\|\|\|___\|\|\|\|__________\|\|\|\|\|\|\|.
		____UGU___UCUA__________UGGUUUCU
(miRNA)	3'	___A___CGA____U_________________	5'

UTR3

6mer

9718-9729

0.0022520983430485

Position on chromosome:

18:55153674-55153685

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	UUUUUUCUAGUUCUUC__________________C	3'
		________________ACGGUU______CCAAAG_
		________________\|\|.\|.\|______\|\|\|\|\|\|_
		________________UGUCGA______GGUUUC_
(miRNA)	3'	_______________A______UCUAUU______U	5'

UTR3

6mer

10018-10035

0.0034139724627916

Position on chromosome:

18:55153974-55153991

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,monDom5,galGal3

Binding area:

(Transcript)	5'	UGGGGAAAGU_____AAU__GC_______U	3'
		__________UGCAG___GA___CCAAAG_
		__________\|.\|\|\|___\|\|___\|\|\|\|\|\|_
		__________AUGUC___CU___GGUUUC_
(miRNA)	3'	_________U_____GAU__AUU______U	5'

UTR3

6mer

11155-11173

0.000758061095535186

Position on chromosome:

18:55155111-55155129

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UUGUUCUUUC_______________________	3'
		__________UUAUAC__UUGGGU__UCAAAGA
		__________\|.\|\|\|\|__.\|.\|.\|__.\|\|\|\|\|\|
		__________AGUAUG__GAUCUA__GGUUUCU
(miRNA)	3'	________________UC______UU_______	5'

UTR3

7mer

11481-11488

0.0114972456442974

Position on chromosome:

18:55155437-55155444

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	UUAUUUUUCUCUUAUUAAUCU________	3'
		_____________________GCCAAAGA
		_____________________.\|\|\|\|\|\|\|
		_____________________UGGUUUCU
(miRNA)	3'	____________________U________	5'

UTR3

7mer

11688-11704

0.00630350530980528

Position on chromosome:

18:55155644-55155660

Conserved species:

panTro2,rheMac2,oryCun2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	AAAGUUCAAAUC___UUUU_______________	3'
		____________CAU_______GAU__CCAAAGA
		____________\|\|\|_______\|\|\|__\|\|\|\|\|\|\|
		____________GUA_______CUA__GGUUUCU
(miRNA)	3'	___________A___UGUCGAU___UU_______	5'

UTR3

7mer

12371-12391

0.0036364344788153

Position on chromosome:

18:55156327-55156347

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	GGUGGCUU__________ACAUU________	3'
		________UACA__UGGG_____ACCAAAGG
		________\|\|\|\|__\|.\|._____\|\|\|\|\|\|\|.
		________AUGU__AUCU_____UGGUUUCU
(miRNA)	3'	_______U____CG____AU___________	5'

UTR3

7mer

13276-13293

0.00590000239318871

Position on chromosome:

18:55157232-55157249

Conserved species:

panTro2,rheMac2,bosTau4,loxAfr3

Binding area:

(Transcript)	5'	UUUUCUCCCCA__U_____AU________	3'
		___________AG_CUAGG__GCCAAAGA
		___________\|\|_\|\|\|\|.__.\|\|\|\|\|\|\|
		___________UC_GAUCU__UGGUUUCU
(miRNA)	3'	__________G________AU________	5'

UTR3

7mer

13503-13523

0.00383792169143085

Position on chromosome:

18:55157459-55157479

Conserved species:

panTro2,rheMac2,canFam2

Binding area:

(Transcript)	5'	UACAAGA_G_____UCCUUCC_______U	3'
		_______G_AGCUA_______ACCAAAG_
		_______._\|\|\|\|\|_______\|\|\|\|\|\|\|_
		_______U_UCGAU_______UGGUUUC_
(miRNA)	3'	______A_G_____CUAU__________U	5'

UTR3

6mer

13855-13875

0.00230598956533024

Position on chromosome:

18:55157811-55157831

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UGAGCCUC___UG_C_AU____C_______	3'
		________CGU__A_C___AUG_UCAAAGA
		________\|.\|__\|_\|___\|\|._.\|\|\|\|\|\|
		________GUA__U_G___UAU_GGUUUCU
(miRNA)	3'	_______A___UG_C_AUC___U_______	5'

UTR3

6mer

14201-14224

0.00515062549754553

Position on chromosome:

18:55158157-55158180

Conserved species:

panTro2,rheMac2,canFam2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	UCUU___CCC________U__UU______U	3'
		____UCA___UGC_GCUA_AU__CCAAAG_
		____\|\|\|___\|.\|_\|\|\|\|_\|\|__\|\|\|\|\|\|_
		____AGU___AUG_CGAU_UA__GGUUUC_
(miRNA)	3'	_____________U____C__UU______U	5'

UTR3

8mer

12-40

0.00990150692352782

Position on chromosome:

18:55102961-55102989

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	_____CCGC___UC____CCUC________	3'
		_UACA____CUA__GAUG____ACCAAAGA
		_\|\|\|\|____\|\|\|__\|\|\|.____\|\|\|\|\|\|\|\|
		_AUGU____GAU__CUAU____UGGUUUCU
(miRNA)	3'	U____C________________________	5'

UTR3

8mer

981-1009

0.0135045113852967

Position on chromosome:

18:55103930-55103958

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	__GC________A_AAAUCAAC________	3'
		_G__CAGCUGGA_G________ACCAAAGA
		_.__\|\|\|\|\|.\|\|_.________\|\|\|\|\|\|\|\|
		_U__GUCGAUCU_U________UGGUUUCU
(miRNA)	3'	G_AU________A_________________	5'

UTR3

7mer

1482-1509

0.0282093970163275

Position on chromosome:

18:55143923-55143950

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	____CCACCUC____ACGUGU_______C	3'
		UCGU_______CAGC______ACCAAAG_
		\|\|.\|_______\|\|\|\|______\|\|\|\|\|\|\|_
		AGUA_______GUCG______UGGUUUC_
(miRNA)	3'	____U__________AUCUAU_______U	5'