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| | | Ensembl Gene Id | miRNA name | miTG score | Also Predicted | | | | | | | | 1 | ENSG00000176887 (SOX11) | hsa-miR-641 | 0.870789350450423 |   | |  | | | | Gene details  | | loading... | | | miRNA details | | loading... | |
pubMed links: miRNA | gene | both
UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 6mer | 438-465 | 0.00646442655259241 | 9 | | | | | | | | | | | Position on chromosome: | 2:5834618-5834645 | | Conserved species: | panTro2,rheMac2,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5 | | Binding area: | | (Transcript) | 5' | A___CGCUGUU___AGC_____G_________ | 3' | | | _AGG_______UGA___UUGUC____GUCUUU | | | | _|||_______|||___.|.||____|||||| | | | | _UCC_______ACU___GAUAG____CAGAAA | | | (miRNA) | 3' | C_____________GA______GAUA______ | 5' |
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| | | | | | | | | UTR3 | 7mer | 652-672 | 0.0187054082056857 | 12 | | | | | | | | | | | Position on chromosome: | 2:5834832-5834852 | | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3 | | Binding area: | | (Transcript) | 5' | UUUUUUG____GA__AAA______________C | 3' | | | _______GAGG__GA___CUG____AUGUCUU_ | | | | _______||||__||___||.____|||||||_ | | | | _______CUCC__CU___GAU____UACAGAA_ | | | (miRNA) | 3' | ___________A___GA____AGGA_______A | 5' |
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| | | | | | | | | UTR3 | 6mer | 931-941 | 0.00624408817656839 | 9 | | | | | | | | | | | Position on chromosome: | 2:5835111-5835121 | | Conserved species: | panTro2,rheMac2,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,monDom5,xenTro2 | | Binding area: | | (Transcript) | 5' | UUUUUGAUACAUAACAGA___CA______ | 3' | | | __________________CCU__GUCUUU | | | | __________________|||__|||||| | | | | __________________GGA__CAGAAA | | | (miRNA) | 3' | _________________A___UA______ | 5' |
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| | | | | | | | | UTR3 | 8mer | 3845-3872 | 0.00345100595533709 | 0 | | | | | | | | | | | Position on chromosome: | 2:5838025-5838052 | | Conserved species: | Not Conserved | | Binding area: | | (Transcript) | 5' | U___AAG______GAAAACUUGGC________ | 3' | | | _UGA______CCU___________AUGUCUUU | | | | _|||______|||___________|||||||| | | | | _ACU______GGA___________UACAGAAA | | | (miRNA) | 3' | C___GAGAUA______________________ | 5' |
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| | | | | | | | | UTR3 | 6mer | 6316-6341 | 0.00292373048985308 | 2 | | | | | | | | | | | Position on chromosome: | 2:5840496-5840521 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | GA______UUUAAUAUG__G_________A | 3' | | | __GAUUUU_________AU_CU_UGUCUU_ | | | | __||.|.|_________||_||_||||||_ | | | | __CUGAGA_________UA_GA_ACAGAA_ | | | (miRNA) | 3' | _A_________________G__U______A | 5' |
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| | | | | | | | | UTR3 | 6mer | 6584-6601 | 0.00410065685551598 | 6 | | | | | | | | | | | Position on chromosome: | 2:5840764-5840781 | | Conserved species: | panTro2,rheMac2,bosTau4,canFam2,dasNov2,echTel1 | | Binding area: | | (Transcript) | 5' | GUACAUAUGUU____G____AGA_________ | 3' | | | ___________GUGG_UUUA______GUCUUU | | | | ___________|||._|.||______|||||| | | | | ___________CACU_AGAU______CAGAAA | | | (miRNA) | 3' | __________C____G____AGGAUA______ | 5' |
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