DIANA TOOLS - MicroT-CDS

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Results: 4575 targets for miRNAs hsa-miR-590-3p

. Threshold is set to 0.7.

Name:	hsa-miR-590-3p
Alternative description:	MIMAT0004801
Related names:
miRNA sequence:	uaauuuuauguauaagcuagu
External links:	miRBase
DIANA resources:	microT-CDS
Related diseases:	Alzheimer Disease Colorectal Neoplasms Fibrosis Glioblastoma Hematologic Neoplasms Hepatitis C, Chronic Inflammation Lupus Nephritis Metabolic Syndrome X Neoplasms

Ensembl Gene Id

miRNA name

miTG score

Also Predicted

ENSG00000123560 (PLP1)

hsa-miR-590-3p

0.999998430457511

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

1143-1167

0.00348681386511979

Position on chromosome:

X:103046670-103046694

Conserved species:

panTro2,rheMac2,bosTau4,dasNov2

Binding area:

(Transcript)	5'	UAUG____UUU____A__UAGG_______	3'
		____ACUG___UUUA_AC____AAAAUUG
		____\|\|\|.___.\|\|\|_\|\|____\|\|\|\|\|\|.
		____UGAU___GAAU_UG____UUUUAAU
(miRNA)	3'	________C______A__UA_________	5'

UTR3

6mer

1175-1200

0.00279093950363238

Position on chromosome:

X:103046702-103046727

Conserved species:

panTro2,rheMac2,bosTau4,canFam2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	UUA___AUCACAAAUG____UA_______	3'
		___AGC__________AUAU__AAAAUUG
		___\|\|\|__________\|\|\|.__\|\|\|\|\|\|.
		___UCG__________UAUG__UUUUAAU
(miRNA)	3'	__A___AA____________UA_______	5'

UTR3

9mer

1970-1988

0.147917446111676

Position on chromosome:

X:103047497-103047515

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	UAUCUUACAA___G___UU__________	3'
		__________AGU_UAU__UAUAAAAUUA
		__________\|\|._\|\|\|__.\|\|\|\|\|\|\|\|\|
		__________UCG_AUA__GUAUUUUAAU
(miRNA)	3'	_________A___A___U___________	5'

UTR3

9mer

1990-2003

0.0749429712903307

Position on chromosome:

X:103047517-103047530

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	AUUUUAUAAAAUUAA__AAA_____________	3'
		_______________AG_______AUAAAAUUA
		_______________\|\|_______\|\|\|\|\|\|\|\|\|
		_______________UC_______UAUUUUAAU
(miRNA)	3'	______________A__GAAUAUG_________	5'

ENSG00000161813 (LARP4)

hsa-miR-590-3p

0.999997473043066

Gene details
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miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

144-163

0.0100405382667107

Position on chromosome:

12:50869792-50869811

Conserved species:

panTro2,rheMac2,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,galGal3

Binding area:

(Transcript)	5'	GAGUUGUG___GAUAGGAU_CC______C	3'
		________AGU________C__AAAAUU_
		________\|\|.________\|__\|\|\|\|\|\|_
		________UCG________G__UUUUAA_
(miRNA)	3'	_______A___AAUAU____UA______U	5'

UTR3

8mer

401-418

0.0407030999079107

Position on chromosome:

12:50870049-50870066

Conserved species:

panTro2,rheMac2,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	UUUUUUGAAGA___AUUU__U_________	3'
		___________AGC_____C_GUAAAAUUA
		___________\|\|\|_____\|_.\|\|\|\|\|\|\|\|
		___________UCG_____G_UAUUUUAAU
(miRNA)	3'	__________A___AAUAU___________	5'

UTR3

6mer

401-425

0.00602715691548742

Position on chromosome:

12:50870049-50870073

Conserved species:

panTro2,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	AAGA___AUUUC____AAAUUA_______	3'
		____AGC_____UGUA______GAAAUUA
		____\|\|\|_____\|.\|\|______.\|\|\|\|\|\|
		____UCG_____AUAU______UUUUAAU
(miRNA)	3'	___A___A________GUA__________	5'

UTR3

6mer

736-759

0.00374616531935843

Position on chromosome:

12:50870384-50870407

Conserved species:

panTro2,rheMac2,oryCun2,dasNov2

Binding area:

(Transcript)	5'	AAGG__G____U__AGAAAUUG______U	3'
		____GG_UUAU_CA________AAAAUU_
		____.\|_\|\|\|\|_\|\|________\|\|\|\|\|\|_
		____UC_AAUA_GU________UUUUAA_
(miRNA)	3'	___A__G____U__A_____________U	5'

UTR3

6mer

846-853

0.00268500914177805

Position on chromosome:

12:50870494-50870501

Conserved species:

panTro2

Binding area:

(Transcript)	5'	GAAUACCCCCAAAAUGAGAA__________U	3'
		____________________ACA__AAAUU_
		____________________\|\|\|__\|\|\|\|\|_
		____________________UGU__UUUAA_
(miRNA)	3'	___________________A___AU_____U	5'

UTR3

6mer

1143-1158

0.00216122505074246

Position on chromosome:

12:50870791-50870806

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	UGUUAAAUAAUG___AA____AA_______U	3'
		____________UAG___GUA___AAAAUU_
		____________\|\|\|___.\|\|___\|\|\|\|\|\|_
		____________AUC___UAU___UUUUAA_
(miRNA)	3'	___________G___GAA___GUA______U	5'

UTR3

7mer

1318-1333

0.00737699031068095

Position on chromosome:

12:50870966-50870981

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,dasNov2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	AAGAUGAGAAAGA_____GAAG__________	3'
		_____________UGGUU_______AAAAUUA
		_____________\|.\|.\|_______\|\|\|\|\|\|\|
		_____________AUCGA_______UUUUAAU
(miRNA)	3'	____________G_____AUAUGUA_______	5'

UTR3

8mer

1647-1659

0.0163032428841268

Position on chromosome:

12:50871295-50871307

Conserved species:

panTro2,rheMac2,mm9,oryCun2,bosTau4,canFam2,echTel1

Binding area:

(Transcript)	5'	AAAGUGAAUGUAAAUG___GU________	3'
		________________GUG__UAAAAUUA
		________________.\|.__\|\|\|\|\|\|\|\|
		________________UAU__AUUUUAAU
(miRNA)	3'	_______________A___GU________	5'

UTR3

6mer

1878-1894

0.00191289320324323

Position on chromosome:

12:50871526-50871542

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UCAUUUCUACAC____U___UA___________	3'
		____________ACUA_UUU______AAAAUUG
		____________\|\|\|\|_.\|\|______\|\|\|\|\|\|.
		____________UGAU_GAA______UUUUAAU
(miRNA)	3'	________________C___UAUGUA_______	5'

UTR3

6mer

2231-2243

0.00168021785241323

Position on chromosome:

12:50871879-50871891

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	ACUUACUGUUAGUCC____CUA__________U	3'
		_______________AGCU_______AAAAUU_
		_______________\|\|\|\|_______\|\|\|\|\|\|_
		_______________UCGA_______UUUUAA_
(miRNA)	3'	______________A____AUAUGUA______U	5'

UTR3

6mer

2343-2367

0.00137464936078444

Position on chromosome:

12:50871991-50872015

Conserved species:

panTro2

Binding area:

(Transcript)	5'	UAA______G___UAACCUUUAA_____U	3'
		___UUUGUA_AUA__________AAAUU_
		___.\|\|.\|\|_\|\|\|__________\|\|\|\|\|_
		___GAAUAU_UAU__________UUUAA_
(miRNA)	3'	__C______G__________________U	5'

UTR3

8mer

3082-3108

0.0169569622277161

Position on chromosome:

12:50872730-50872756

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,loxAfr3

Binding area:

(Transcript)	5'	UU___A_____UUUUGUUU_C________	3'
		__CUG_UUUAU________C_UAAAAUUA
		__\|\|._.\|\|\|\|________\|_\|\|\|\|\|\|\|\|
		__GAU_GAAUA________G_AUUUUAAU
(miRNA)	3'	_U___C_____U________U________	5'

UTR3

6mer

3993-4011

0.00385993858801702

Position on chromosome:

12:50873641-50873659

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UGUUGUCAAA_________CC_CC_______	3'
		__________ACUG__UUA__C__AAAAUUG
		__________\|\|\|.__\|\|\|__\|__\|\|\|\|\|\|.
		__________UGAU__AAU__G__UUUUAAU
(miRNA)	3'	______________CG___AU_UA_______	5'

UTR3

6mer

4086-4103

0.00908582942277158

Position on chromosome:

12:50873734-50873751

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,galGal3

Binding area:

(Transcript)	5'	CAACAUCGCCA__G_GC___GG_______	3'
		___________AG_U__UAU__GAAAUUA
		___________\|\|_\|__\|\|.__.\|\|\|\|\|\|
		___________UC_A__AUG__UUUUAAU
(miRNA)	3'	__________A__G_AU___UA_______	5'

UTR3

7mer

4106-4112

0.0180584456231601

Position on chromosome:

12:50873754-50873760

Conserved species:

panTro2,rheMac2,mm9,oryCun2,bosTau4,canFam2

Binding area:

(Transcript)	5'	CAAGGUGCUAUGGGAAAUUAAC_______	3'
		______________________AAAAUUA
		______________________\|\|\|\|\|\|\|
		______________________UUUUAAU
(miRNA)	3'	_____________________A_______	5'

UTR3

9mer

4109-4129

0.0793822853400572

Position on chromosome:

12:50873757-50873777

Conserved species:

panTro2,mm9,oryCun2,bosTau4,canFam2,loxAfr3

Binding area:

(Transcript)	5'	UUAACAAA_____AAAAAAA_________	3'
		________AUUAG_______AUAAAAUUA
		________\|.\|\|\|_______\|\|\|\|\|\|\|\|\|
		________UGAUC_______UAUUUUAAU
(miRNA)	3'	_____________GAAUAUG_________	5'

ENSG00000152601 (MBNL1)

hsa-miR-590-3p

0.999991712776705

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

7mer

485-500

0.0145572447946995

Position on chromosome:

3:152180616-152180631

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,dasNov2,echTel1,monDom5,galGal3,xenTro2

Binding area:

(Transcript)	5'	AACAAAGGUGCAC_______U________	3'
		_____________CUUGUAU_UAAAAUUG
		_____________\|\|\|.\|\|._\|\|\|\|\|\|\|.
		_____________GAAUAUG_AUUUUAAU
(miRNA)	3'	____________C_______U________	5'

UTR3

9mer

926-943

0.0512285299470399

Position on chromosome:

3:152181057-152181074

Conserved species:

panTro2,mm9,oryCun2,bosTau4,canFam2,monDom5

Binding area:

(Transcript)	5'	UAUAUAUAUAA___A_______________	3'
		___________UAG__UAUAUAUAAAAUUA
		___________\|\|\|__\|\|\|\|.\|\|\|\|\|\|\|\|\|
		___________AUC__AUAUGUAUUUUAAU
(miRNA)	3'	__________G___GA______________	5'

UTR3

6mer

1038-1049

0.00292039312494944

Position on chromosome:

3:152181169-152181180

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	GACACAGUAACAAAAAA___AG________	3'
		_________________AUG___GAAAUUA
		_________________\|\|.___.\|\|\|\|\|\|
		_________________UAU___UUUUAAU
(miRNA)	3'	________________A___GUA_______	5'

UTR3

7mer

1333-1349

0.00940738790257661

Position on chromosome:

3:152181464-152181480

Conserved species:

panTro2,rheMac2,oryCun2,canFam2,dasNov2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	AUAGCCUUAGAA__C___U____________	3'
		____________AG_CUU_UAC__AAAAUUA
		____________\|\|_\|\|\|_\|\|\|__\|\|\|\|\|\|\|
		____________UC_GAA_AUG__UUUUAAU
(miRNA)	3'	___________A______U___UA_______	5'

UTR3

6mer

1458-1474

0.00175032418453078

Position on chromosome:

3:152181589-152181605

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3

Binding area:

(Transcript)	5'	UUUGCUCUGUUC___AGUUCUA________	3'
		____________AGC________AAAAUUG
		____________\|\|\|________\|\|\|\|\|\|.
		____________UCG________UUUUAAU
(miRNA)	3'	___________A___AAUAUGUA_______	5'

UTR3

8mer

2211-2230

0.0252638837076195

Position on chromosome:

3:152182342-152182361

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	UCUAGAUC____AUA___GA_________U	3'
		________CUAG___UUA___AUAAAAUU_
		________\|\|\|\|___\|\|\|___\|\|\|\|\|\|\|\|_
		________GAUC___AAU___UAUUUUAA_
(miRNA)	3'	_______U____G_____AUG________U	5'

UTR3

7mer

2365-2390

0.00532519406332105

Position on chromosome:

3:152182496-152182521

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	AAU___CAA___________AAUG_______	3'
		___ACU___AGUU__UACGU____AAAAUUA
		___\|\|\|___\|\|.\|__\|\|\|.\|____\|\|\|\|\|\|\|
		___UGA___UCGA__AUGUA____UUUUAAU
(miRNA)	3'	_____________AU________________	5'

UTR3

6mer

2581-2594

0.00853619954185973

Position on chromosome:

3:152182712-152182725

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,monDom5,galGal3,xenTro2,fr2

Binding area:

(Transcript)	5'	CUAAUACAAUGACAG___G__________________	3'
		_______________ACU_AGC________AAAAUUG
		_______________\|\|\|_\|\|\|________\|\|\|\|\|\|.
		_______________UGA_UCG________UUUUAAU
(miRNA)	3'	______________________AAUAUGUA_______	5'

UTR3

6mer

2963-2980

0.00998054102063025

Position on chromosome:

3:152183094-152183111

Conserved species:

panTro2,rheMac2,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	CAAAACAAGU____A___U____C______U	3'
		__________AUUG_CUU___CA_AAAAUU_
		__________\|.\|._\|\|\|___\|\|_\|\|\|\|\|\|_
		__________UGAU_GAA___GU_UUUUAA_
(miRNA)	3'	______________C___UAU__A______U	5'

UTR3

8mer

3291-3318

0.0729731610411073

Position on chromosome:

3:152183422-152183449

Conserved species:

panTro2,rheMac2,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	U___UUCU_____UAGU___U________	3'
		_ACU____GCUUG____UGC_UAAAAUUA
		_\|\|\|____\|\|\|\|.____\|.\|_\|\|\|\|\|\|\|\|
		_UGA____CGAAU____AUG_AUUUUAAU
(miRNA)	3'	____U_______________U________	5'

ENSG00000106299 (WASL)

hsa-miR-590-3p

0.999987899948286

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

2505-2528

0.0667432603207165

Position on chromosome:

7:123324494-123324517

Conserved species:

panTro2,rheMac2,mm9,oryCun2,bosTau4,canFam2,dasNov2,echTel1,monDom5,galGal3,xenTro2

Binding area:

(Transcript)	5'	ACUUU___U__GUGG__U_U_________	3'
		_____CUG_CU____AU_C_GUAAAAUUA
		_____\|\|._\|\|____\|\|_\|_.\|\|\|\|\|\|\|\|
		_____GAU_GA____UA_G_UAUUUUAAU
(miRNA)	3'	____U___C__A_____U___________	5'

UTR3

6mer

1844-1865

0.00331708777739738

Position on chromosome:

7:123323833-123323854

Conserved species:

panTro2

Binding area:

(Transcript)	5'	AAUGUG__A____CUUUU__GC______U	3'
		______AC_GGCU_____UA__AAAAUU_
		______\|\|_.\|\|\|_____.\|__\|\|\|\|\|\|_
		______UG_UCGA_____GU__UUUUAA_
(miRNA)	3'	________A____AUAU___A_______U	5'

UTR3

6mer

1834-1854

0.00267524983298018

Position on chromosome:

7:123323823-123323843

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	GCUCUUU_____AAAAUUUUUG______U	3'
		_______UUAGC__________AAAAUU_
		_______.\|\|\|\|__________\|\|\|\|\|\|_
		_______GAUCG__________UUUUAA_
(miRNA)	3'	______U_____AAUAUGUA________U	5'

UTR3

6mer

1807-1822

0.00280920146903746

Position on chromosome:

7:123323796-123323811

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UUUUUUGGUAUU_______GAA__________U	3'
		____________ACU__CU___ACA__AAAUU_
		____________\|\|\|__\|\|___\|\|\|__\|\|\|\|\|_
		____________UGA__GA___UGU__UUUAA_
(miRNA)	3'	_______________UC__AUA___AU_____U	5'

UTR3

8mer

1380-1401

0.00980520539224891

Position on chromosome:

7:123323369-123323390

Conserved species:

panTro2,bosTau4,dasNov2,loxAfr3

Binding area:

(Transcript)	5'	UAUGCAU____AAUGG______________	3'
		_______ACUA_____UGUGU_UAAAAUUA
		_______\|\|\|\|_____\|.\|.._\|\|\|\|\|\|\|\|
		_______UGAU_____AUAUG_AUUUUAAU
(miRNA)	3'	___________CGA_______U________	5'

UTR3

7mer

1272-1296

0.004639835783986

Position on chromosome:

7:123323261-123323285

Conserved species:

panTro2,rheMac2,oryCun2

Binding area:

(Transcript)	5'	ACCU___UUAAAU____GGUAG_______	3'
		____ACU______UUUA_____AAAAUUA
		____\|\|\|______.\|\|\|_____\|\|\|\|\|\|\|
		____UGA______GAAU_____UUUUAAU
(miRNA)	3'	_______UC________AUGUA_______	5'

UTR3

7mer

1170-1180

0.00549367502620903

Position on chromosome:

7:123323159-123323169

Conserved species:

panTro2,rheMac2,bosTau4,canFam2,loxAfr3

Binding area:

(Transcript)	5'	CUAUAGUCACAAUAUCCA_____________________	3'
		__________________ACUA__________AAAAUUA
		__________________\|\|\|\|__________\|\|\|\|\|\|\|
		__________________UGAU__________UUUUAAU
(miRNA)	3'	______________________CGAAUAUGUA_______	5'

UTR3

6mer

725-740

0.00325415960825332

Position on chromosome:

7:123322714-123322729

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	AUUUUAAGUAAU___A__UG_A______U	3'
		____________GUU_AU__A_AAAAUU_
		____________\|.\|_\|\|__\|_\|\|\|\|\|\|_
		____________CGA_UA__U_UUUUAA_
(miRNA)	3'	___________U___A__UG_A______U	5'

UTR3

9mer

25-39

0.0970190223991296

Position on chromosome:

7:123322014-123322028

Conserved species:

panTro2,rheMac2,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	GCAAUUCAUCAUGG___AUA____________	3'
		______________AGC______AUAAAAUUA
		______________\|\|\|______\|\|\|\|\|\|\|\|\|
		______________UCG______UAUUUUAAU
(miRNA)	3'	_____________A___AAUAUG_________	5'

ENSG00000105835 (NAMPT)

hsa-miR-590-3p

0.99998378400638

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

2701-2719

0.0139256352366405

Position on chromosome:

7:105891432-105891450

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	GUGUUUUAUG______UACAGCC______	3'
		__________AUACAU_______AAAUUA
		__________\|\|\|\|\|\|_______\|\|\|\|\|\|
		__________UAUGUA_______UUUAAU
(miRNA)	3'	_________A______U____________	5'

UTR3

6mer

2632-2654

0.00863128169809994

Position on chromosome:

7:105891363-105891385

Conserved species:

panTro2,rn4,bosTau4,canFam2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	UUUUCC___GUU__G___AUCUC______	3'
		______AGU___UA_GUG_____AAAUUA
		______\|\|.___\|\|_.\|._____\|\|\|\|\|\|
		______UCG___AU_UAU_____UUUAAU
(miRNA)	3'	_____A___AAU__G______________	5'

UTR3

9mer

2467-2485

0.123608337532902

Position on chromosome:

7:105891198-105891216

Conserved species:

panTro2,rheMac2,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	AUCACAUAAA_____AUU_____________	3'
		__________AC_AG____UGCAUAAAAUUA
		__________\|\|_\|\|____\|.\|\|\|\|\|\|\|\|\|\|
		__________UG_UC____AUGUAUUUUAAU
(miRNA)	3'	____________A__GAAU____________	5'

UTR3

7mer

2235-2253

0.0149651376222913

Position on chromosome:

7:105890966-105890984

Conserved species:

panTro2,rheMac2,oryCun2,canFam2,dasNov2,monDom5

Binding area:

(Transcript)	5'	GUUUGUGUUA_______AUUUG_______	3'
		__________UUGUACA_____AAAAUUA
		__________\|\|.\|\|\|\|_____\|\|\|\|\|\|\|
		__________AAUAUGU_____UUUUAAU
(miRNA)	3'	_________G_______A___________	5'

UTR3

7mer

1777-1792

0.00896558885046616

Position on chromosome:

7:105890508-105890523

Conserved species:

oryCun2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	AUAUUUUUUAUUA_____U____A_______	3'
		_____________AGUUU___UA_AAAAUUA
		_____________\|\|.\|\|___.\|_\|\|\|\|\|\|\|
		_____________UCGAA___GU_UUUUAAU
(miRNA)	3'	____________A_____UAU__A_______	5'

UTR3

7mer

1324-1343

0.00348389044269511

Position on chromosome:

7:105890055-105890074

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	UUUAUUAAC___CC________C_______	3'
		_________CUG__CUU_UACA_AAAAUUA
		_________\|\|.__\|\|\|_\|\|\|\|_\|\|\|\|\|\|\|
		_________GAU__GAA_AUGU_UUUUAAU
(miRNA)	3'	________U___C____U____A_______	5'

UTR3

6mer

1115-1121

0.00369273970757492

Position on chromosome:

7:105889846-105889852

Conserved species:

panTro2,rheMac2,canFam2,dasNov2,echTel1

Binding area:

(Transcript)	5'	UGACAUUAAAUGUGAAAUUUUA_______	3'
		______________________AAAAUUG
		______________________\|\|\|\|\|\|.
		______________________UUUUAAU
(miRNA)	3'	_____________________A_______	5'

UTR3

7mer

221-236

0.0136987021084908

Position on chromosome:

7:105888952-105888967

Conserved species:

panTro2,rheMac2,dasNov2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	UUUAUAAUGAAAU___U____G___________	3'
		_____________CUA_CUUG_____AAAAUUA
		_____________\|\|\|_\|\|\|._____\|\|\|\|\|\|\|
		_____________GAU_GAAU_____UUUUAAU
(miRNA)	3'	____________U___C____AUGUA_______	5'

ENSG00000172687 (ZNF738)

hsa-miR-590-3p

0.999975655388576

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

46-55

0.00421725269240715

Position on chromosome:

19:21560332-21560341

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	GCACACACACACACACAC___C______U	3'
		__________________ACA_AAAAUU_
		__________________\|\|\|_\|\|\|\|\|\|_
		__________________UGU_UUUUAA_
(miRNA)	3'	_________________A___A______U	5'

UTR3

6mer

606-627

0.0136556957127272

Position on chromosome:

19:21560892-21560913

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	AAAUGA___UUU___GC____________U	3'
		______ACU___GUU__AUGCA_AAAAUU_
		______\|\|\|___\|.\|__\|\|.\|\|_\|\|\|\|\|\|_
		______UGA___CGA__UAUGU_UUUUAA_
(miRNA)	3'	_________U_____A______A______U	5'

UTR3

6mer

739-758

0.0115927488620115

Position on chromosome:

19:21561025-21561044

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UUCAAAUU____GGA___AUUA______U	3'
		________UUGG___AUA____AAAAUU_
		________.\|.\|___\|\|\|____\|\|\|\|\|\|_
		________GAUC___UAU____UUUUAA_
(miRNA)	3'	_______U____GAA___GUA_______U	5'

UTR3

7mer

925-940

0.0115228766454085

Position on chromosome:

19:21561211-21561226

Conserved species:

panTro2

Binding area:

(Transcript)	5'	AGGAAGUACCAA_____UUUU_______U	3'
		____________UAUAC____UAAAAUU_
		____________\|\|\|\|\|____\|\|\|\|\|\|\|_
		____________AUAUG____AUUUUAA_
(miRNA)	3'	___________A_____U__________U	5'

UTR3

6mer

1047-1068

0.0125588370837192

Position on chromosome:

19:21561333-21561354

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	ACACAG__UU__UC___C_UGA______U	3'
		______UU__CU__UGU_C___AAAAUU_
		______.\|__\|\|__\|.\|_\|___\|\|\|\|\|\|_
		______GA__GA__AUA_G___UUUUAA_
(miRNA)	3'	_____U__UC_______U_UA_______U	5'

UTR3

7mer

1452-1473

0.0268058555079815

Position on chromosome:

19:21561738-21561759

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	GAUUCUC__UU__GUG__UUU________	3'
		_______UU__CU___AC___UAAAAUUG
		_______.\|__\|\|___\|\|___\|\|\|\|\|\|\|.
		_______GA__GA___UG___AUUUUAAU
(miRNA)	3'	______U__UC__AUA__U__________	5'

UTR3

8mer

1694-1713

0.0558504634050518

Position on chromosome:

19:21561980-21561999

Conserved species:

panTro2

Binding area:

(Transcript)	5'	GUAUUCAAU___U_____UUU________	3'
		_________UUA_UUUGU___UAAAAUUA
		_________.\|\|_.\|\|.\|___\|\|\|\|\|\|\|\|
		_________GAU_GAAUA___AUUUUAAU
(miRNA)	3'	________U___C_____UGU________	5'

UTR3

6mer

1733-1746

0.0103492306949656

Position on chromosome:

19:21562019-21562032

Conserved species:

panTro2

Binding area:

(Transcript)	5'	UACAUUUUUUAUUU__UU__GA___________U	3'
		______________CU__CU_______AAAAUU_
		______________\|\|__\|\|_______\|\|\|\|\|\|_
		______________GA__GA_______UUUUAA_
(miRNA)	3'	_____________U__UC__AUAUGUA______U	5'

UTR3

7mer

1792-1810

0.0377774683782108

Position on chromosome:

19:21562078-21562096

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	GUAUAUAUU___AU___U___________U	3'
		_________CUA__CUU_UAU_UAAAAUU_
		_________\|\|\|__\|\|\|_\|\|._\|\|\|\|\|\|\|_
		_________GAU__GAA_AUG_AUUUUAA_
(miRNA)	3'	________U___C____U___U_______U	5'

ENSG00000122548 (KIAA0087)

hsa-miR-590-3p

0.99996266452732

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

7mer

3392-3409

0.0136387249629757

Position on chromosome:

7:26576132-26576149

Conserved species:

panTro2

Binding area:

(Transcript)	5'	UUGAAUUGAAA___GA_____UC_______	3'
		___________UGG___GUAU__AAAAUUA
		___________\|.\|___.\|\|.__\|\|\|\|\|\|\|
		___________AUC___UAUG__UUUUAAU
(miRNA)	3'	__________G___GAA____UA_______	5'

UTR3

7mer

3262-3281

0.00725896008022803

Position on chromosome:

7:26576002-26576021

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	CUAAUAUU_____GG__AU_C_______U	3'
		________AUUGG__UA__C_UAAAAUU_
		________\|.\|.\|__\|\|__\|_\|\|\|\|\|\|\|_
		________UGAUC__AU__G_AUUUUAA_
(miRNA)	3'	_____________GA__AU_U_______U	5'

UTR3

6mer

2425-2439

0.00365775647915848

Position on chromosome:

7:26575165-26575179

Conserved species:

panTro2,rheMac2,mm9,bosTau4,canFam2,loxAfr3

Binding area:

(Transcript)	5'	UUAGCAUCAAAAAA____AAU____________	3'
		______________UAGU_____CA__AAAUUG
		______________\|\|\|._____\|\|__\|\|\|\|\|.
		______________AUCG_____GU__UUUAAU
(miRNA)	3'	_____________G____AAUAU__AU______	5'

UTR3

6mer

1973-1989

0.00295044892018541

Position on chromosome:

7:26574713-26574729

Conserved species:

panTro2,rheMac2,mm9,bosTau4,canFam2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	ACCACAUAAAUA_____GUAGAA______	3'
		____________ACAUG______AAAUUG
		____________\|\|\|\|.______\|\|\|\|\|.
		____________UGUAU______UUUAAU
(miRNA)	3'	___________A_________________	5'

UTR3

7mer

604-610

0.0104048600325339

Position on chromosome:

7:26573344-26573350

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	GGAAUAAAAACCAAACCAAAAC_______	3'
		______________________AAAAUUA
		______________________\|\|\|\|\|\|\|
		______________________UUUUAAU
(miRNA)	3'	_____________________A_______	5'

UTR3

9mer

12-30

0.139430248010862

Position on chromosome:

7:26572752-26572770

Conserved species:

panTro2,rheMac2,rn4,mm9,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,galGal3

Binding area:

(Transcript)	5'	UAUUUUCUCA_____A_____A_________	3'
		__________ACUAG___GUG_AUAAAAUUA
		__________\|\|\|\|\|___.\|._\|\|\|\|\|\|\|\|\|
		__________UGAUC___UAU_UAUUUUAAU
(miRNA)	3'	_______________GAA___G_________	5'

ENSG00000056586 (RC3H2)

hsa-miR-590-3p

0.999958387983445

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

4879-4906

0.00849580250938838

Position on chromosome:

9:125611714-125611741

Conserved species:

panTro2,rheMac2,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	_____A_____AAAAAAAAAAAG______U	3'
		_UAGC_UUAUG____________AAAAUU_
		_\|\|\|\|_\|\|\|\|.____________\|\|\|\|\|\|_
		_AUCG_AAUAU____________UUUUAA_
(miRNA)	3'	G__________GUA_______________U	5'

UTR3

7mer

4728-4746

0.0270675796170678

Position on chromosome:

9:125611563-125611581

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	CUAUUUUAAA______C____G_______	3'
		__________UGGCUU_UAUA_AAAAUUA
		__________\|.\|\|\|\|_\|\|.\|_\|\|\|\|\|\|\|
		__________AUCGAA_AUGU_UUUUAAU
(miRNA)	3'	_________G______U____A_______	5'

UTR3

6mer

3654-3674

0.00513628523630951

Position on chromosome:

9:125610489-125610509

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,galGal3

Binding area:

(Transcript)	5'	UUCUGUGA____GUU___UCUG_______	3'
		________AGUU___UAC____AAAAUUG
		________\|\|.\|___\|\|\|____\|\|\|\|\|\|.
		________UCGA___AUG____UUUUAAU
(miRNA)	3'	_______A____AU____UA_________	5'

UTR3

7mer

2864-2877

0.00701021130973334

Position on chromosome:

9:125609699-125609712

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,dasNov2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	AUGUAUUUUUUUUUA__AUUU____________	3'
		_______________AG________UAAAAUUG
		_______________\|\|________\|\|\|\|\|\|\|.
		_______________UC________AUUUUAAU
(miRNA)	3'	______________A__GAAUAUGU________	5'

UTR3

7mer

2686-2708

0.00497703768400159

Position on chromosome:

9:125609521-125609543

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	UUAACC___U___UUUAAUUU________	3'
		______UUA_CUU________UAAAAUUG
		______.\|\|_\|\|\|________\|\|\|\|\|\|\|.
		______GAU_GAA________AUUUUAAU
(miRNA)	3'	_____U___C___UAUGU___________	5'

UTR3

7mer

2233-2256

0.00432610449237434

Position on chromosome:

9:125609068-125609091

Conserved species:

panTro2,canFam2

Binding area:

(Transcript)	5'	CAGAC____GA____ACUUUU________	3'
		_____CUAG__UAUG______UAAAAUUG
		_____\|\|\|\|__\|\|\|.______\|\|\|\|\|\|\|.
		_____GAUC__AUAU______AUUUUAAU
(miRNA)	3'	____U____GA____GU____________	5'

UTR3

7mer

1590-1607

0.00611087631645215

Position on chromosome:

9:125608425-125608442

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,loxAfr3

Binding area:

(Transcript)	5'	CAAUUUUAUAU____C____AG__________	3'
		___________GCUG_CUUG_____AAAAUUA
		___________.\|\|._\|\|\|._____\|\|\|\|\|\|\|
		___________UGAU_GAAU_____UUUUAAU
(miRNA)	3'	_______________C____AUGUA_______	5'

UTR3

7mer

1530-1549

0.0025040331310249

Position on chromosome:

9:125608365-125608384

Conserved species:

panTro2

Binding area:

(Transcript)	5'	AUGGGAUCA____A____UUGA_______	3'
		_________UUUA_ACAU____AAAAUUA
		_________.\|\|\|_\|\|\|\|____\|\|\|\|\|\|\|
		_________GAAU_UGUA____UUUUAAU
(miRNA)	3'	________C____A_______________	5'

UTR3

7mer

1005-1018

0.00345964985626681

Position on chromosome:

9:125607840-125607853

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	AGCAGUUAUUCCCUU____________________	3'
		_______________CUAGU_____C_UAAAAUUG
		_______________\|\|\|\|._____\|_\|\|\|\|\|\|\|.
		_______________GAUCG_____G_AUUUUAAU
(miRNA)	3'	______________U_____AAUAU_U________	5'

UTR3

8mer

977-994

0.00852003890235284

Position on chromosome:

9:125607812-125607829

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	GCAGUUUUUU__UU___UUA_________U	3'
		__________CU__UUU____AUAAAAUU_
		__________\|\|__.\|\|____\|\|\|\|\|\|\|\|_
		__________GA__GAA____UAUUUUAA_
(miRNA)	3'	_________U__UC___UAUG________U	5'

UTR3

6mer

69-87

0.01609694299261

Position on chromosome:

9:125606904-125606922

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	CAUGAUUUUC___GU__UG_GAG_______	3'
		__________AGU___U__A___AAAAUUG
		__________\|\|.___\|__\|___\|\|\|\|\|\|.
		__________UCG___A__U___UUUUAAU
(miRNA)	3'	_________A___AAU_UG_A_________	5'

UTR3

9mer

16-39

0.108878940420376

Position on chromosome:

9:125606851-125606874

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	CAUGU___U__A__C__AAA_________	3'
		_____AUU_GC_UG_AC___AUAAAAUUA
		_____\|.\|_\|\|_\|._\|\|___\|\|\|\|\|\|\|\|\|
		_____UGA_CG_AU_UG___UAUUUUAAU
(miRNA)	3'	________U__A__A______________	5'

UTR3

7mer

2392-2418

0.0127624565290325

Position on chromosome:

9:125642062-125642088

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	CA___C______GACUU___AC_______	3'
		__UGG_CUUGUG_____CAU__AAAAUUA
		__\|.\|_\|\|\|.\|._____\|\|\|__\|\|\|\|\|\|\|
		__AUC_GAAUAU_____GUA__UUUUAAU
(miRNA)	3'	_G___________________________	5'

UTR3

8mer

1934-1954

0.0235915497321997

Position on chromosome:

9:125622403;125627628-125622410;125627640

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	UGCAGAUU___UAA__GAAA__________	3'
		________CUG___CU_____AUAAAAUUG
		________\|\|.___\|\|_____\|\|\|\|\|\|\|\|.
		________GAU___GA_____UAUUUUAAU
(miRNA)	3'	_______U___C____AUAUG_________	5'

ENSG00000084676 (NCOA1)

hsa-miR-590-3p

0.999933494161438

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

9mer

996-1022

0.0648762303630864

Position on chromosome:

2:24992074-24992100

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	GG_____AAAGU___UUAAA_________	3'
		__UAGCU_____UAU_____AUAAAAUUA
		__\|\|\|\|\|_____\|\|\|_____\|\|\|\|\|\|\|\|\|
		__AUCGA_____AUA_____UAUUUUAAU
(miRNA)	3'	_G_____________UG____________	5'

UTR3

7mer

1347-1370

0.0102711288906753

Position on chromosome:

2:24992425-24992448

Conserved species:

panTro2,rheMac2,canFam2,dasNov2,monDom5

Binding area:

(Transcript)	5'	CACAG_____________GAGAA_______	3'
		_____GCUA_CUUGUACA_____AAAAUUA
		_____.\|\|\|_\|\|\|.\|\|\|\|_____\|\|\|\|\|\|\|
		_____UGAU_GAAUAUGU_____UUUUAAU
(miRNA)	3'	_________C________A___________	5'

UTR3

6mer

2143-2169

0.00659868991323635

Position on chromosome:

2:24993221-24993247

Conserved species:

panTro2,rheMac2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	GA_____AAAAAAAAA___AGG_______	3'
		__ACUAG_________GUA___AAAAUUG
		__\|\|\|\|\|_________.\|\|___\|\|\|\|\|\|.
		__UGAUC_________UAU___UUUUAAU
(miRNA)	3'	_______GAA_________GUA_______	5'

UTR3

8mer

2253-2276

0.0592399499896434

Position on chromosome:

2:24993331-24993354

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	UUGUU___U__A______GAU________	3'
		_____UUA_GU_UGUACA___UAAAAUUA
		_____.\|\|_\|._\|.\|\|\|\|___\|\|\|\|\|\|\|\|
		_____GAU_CG_AUAUGU___AUUUUAAU
(miRNA)	3'	____U______A_________________	5'

UTR3

8mer

2279-2303

0.0272463142823403

Position on chromosome:

2:24993357-24993381

Conserved species:

panTro2,rheMac2,rn4,mm9,bosTau4,canFam2,dasNov2,loxAfr3,monDom5

Binding area:

(Transcript)	5'	UAUU____CA____AGGAAA_________	3'
		____GCUA__UUUG______AUAAAAUUG
		____.\|\|\|__.\|\|.______\|\|\|\|\|\|\|\|.
		____UGAU__GAAU______UAUUUUAAU
(miRNA)	3'	________C_____AUG____________	5'

UTR3

6mer

2446-2451

0.00647679471436019

Position on chromosome:

2:24993524-24993529

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	AUCUGCAGAAAUUGCCAAAGCCC______	3'
		_______________________AAAUUA
		_______________________\|\|\|\|\|\|
		_______________________UUUAAU
(miRNA)	3'	______________________U______	5'

UTR3

8mer

2039-2066

0.0114616951543036

Position on chromosome:

2:24930379-24930406

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	______C__UGACAGAACG__________C	3'
		_UAGCU_AU__________GCAUAAAAUU_
		_\|\|\|\|\|_\|\|__________.\|\|\|\|\|\|\|\|\|_
		_AUCGA_UA__________UGUAUUUUAA_
(miRNA)	3'	G_____A______________________U	5'

ENSG00000099942 (CRKL)

hsa-miR-590-3p

0.999925009182205

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

2887-2905

0.00397559474770539

Position on chromosome:

22:21307021-21307039

Conserved species:

panTro2,rheMac2,rn4,mm9,canFam2

Binding area:

(Transcript)	5'	GGUUUUUCAC____GAAGGAA___________	3'
		__________CUGG_______ACA___AAUUA
		__________\|\|.\|_______\|\|\|___\|\|\|\|\|
		__________GAUC_______UGU___UUAAU
(miRNA)	3'	_________U____GAAUA_____AUU_____	5'

UTR3

8mer

3669-3682

0.0783654698975016

Position on chromosome:

22:21307803-21307816

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,echTel1,monDom5

Binding area:

(Transcript)	5'	AAUAUUUUCUGUGUA_____U____________	3'
		_______________AGCUU_____UAAAAUUA
		_______________\|\|\|\|\|_____\|\|\|\|\|\|\|\|
		_______________UCGAA_____AUUUUAAU
(miRNA)	3'	______________A_____UAUGU________	5'

UTR3

9mer

3705-3725

0.0836006915269087

Position on chromosome:

22:21307839-21307859

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3

Binding area:

(Transcript)	5'	AGCUUGUU___U_______U_________	3'
		________UUA_UUUGUGC_AUAAAAUUA
		________.\|\|_.\|\|.\|.\|_\|\|\|\|\|\|\|\|\|
		________GAU_GAAUAUG_UAUUUUAAU
(miRNA)	3'	_______U___C_________________	5'

ENSG00000162687 (KCNT2)

hsa-miR-590-3p

0.999919469674518

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

2202-2224

0.00584507074665355

Position on chromosome:

1:196197111-196197133

Conserved species:

panTro2,rheMac2,bosTau4

Binding area:

(Transcript)	5'	UGAAA____AAAUUAAA____________U	3'
		_____AGCU________AUACA_AAAAUU_
		_____\|\|\|\|________\|\|\|\|\|_\|\|\|\|\|\|_
		_____UCGA________UAUGU_UUUUAA_
(miRNA)	3'	____A____A____________A______U	5'

UTR3

7mer

2140-2156

0.0135941005119738

Position on chromosome:

1:196197049-196197065

Conserved species:

panTro2,rheMac2,oryCun2

Binding area:

(Transcript)	5'	AAACUCUAUGAA___AAUUUUA________	3'
		____________AGC________AAAAUUA
		____________\|\|\|________\|\|\|\|\|\|\|
		____________UCG________UUUUAAU
(miRNA)	3'	___________A___AAUAUGUA_______	5'

UTR3

7mer

2055-2077

0.011050815417292

Position on chromosome:

1:196196964-196196986

Conserved species:

panTro2,rheMac2,dasNov2

Binding area:

(Transcript)	5'	CAGAAU____CU___CCUCUUA_______	3'
		______GCUG__GCU_______AAAAUUA
		______.\|\|.__\|\|\|_______\|\|\|\|\|\|\|
		______UGAU__CGA_______UUUUAAU
(miRNA)	3'	_______________AUAUGUA_______	5'

UTR3

6mer

2010-2026

0.0042256574073412

Position on chromosome:

1:196196919-196196935

Conserved species:

panTro2,oryCun2,canFam2,dasNov2

Binding area:

(Transcript)	5'	UUCUUUAAACUU_____________________	3'
		____________ACU_GUUU_UACA__AAAUUG
		____________\|\|\|_\|.\|\|_\|\|\|\|__\|\|\|\|\|.
		____________UGA_CGAA_AUGU__UUUAAU
(miRNA)	3'	_______________U____U____AU______	5'

UTR3

7mer

1622-1636

0.00565928676153144

Position on chromosome:

1:196196531-196196545

Conserved species:

panTro2

Binding area:

(Transcript)	5'	UUAAAUUUAAUUCA__G____UG_________	3'
		______________AG___AU__A_AAAAUUA
		______________\|\|___\|\|__\|_\|\|\|\|\|\|\|
		______________UC___UA__U_UUUUAAU
(miRNA)	3'	_____________A__GAA__UG_A_______	5'

UTR3

6mer

1520-1531

0.00228724603365639

Position on chromosome:

1:196196429-196196440

Conserved species:

panTro2

Binding area:

(Transcript)	5'	CUAUAUAGUAAAUUUC_____A______________C	3'
		________________ACUAG_________AAAAUU_
		________________\|\|\|\|\|_________\|\|\|\|\|\|_
		________________UGAUC_________UUUUAA_
(miRNA)	3'	_____________________GAAUAUGUA______U	5'

UTR3

7mer

1508-1531

0.00332008292458391

Position on chromosome:

1:196196417-196196440

Conserved species:

panTro2

Binding area:

(Transcript)	5'	AUUUC_____AAAAAUU_UUU________	3'
		_____ACUAG_______C___UAAAAUUG
		_____\|\|\|\|\|_______\|___\|\|\|\|\|\|\|.
		_____UGAUC_______G___AUUUUAAU
(miRNA)	3'	__________GAAUAU__U__________	5'

UTR3

7mer

1397-1412

0.00398436834893574

Position on chromosome:

1:196196306-196196321

Conserved species:

panTro2

Binding area:

(Transcript)	5'	AACACUCAAUGA__GA_____________U	3'
		____________AG__UGUAU_UAAAAUU_
		____________\|\|__\|.\|\|._\|\|\|\|\|\|\|_
		____________UC__AUAUG_AUUUUAA_
(miRNA)	3'	___________A__GA_____U_______U	5'

UTR3

8mer

950-969

0.0122360285742876

Position on chromosome:

1:196195859-196195878

Conserved species:

panTro2

Binding area:

(Transcript)	5'	GCAGAUCA___UAA__GA_____________U	3'
		________ACU___AG__UA___AUAAAAUU_
		________\|\|\|___\|\|__\|\|___\|\|\|\|\|\|\|\|_
		________UGA___UC__AU___UAUUUUAA_
(miRNA)	3'	________________GA__AUG________U	5'

UTR3

7mer

693-710

0.00712407117499393

Position on chromosome:

1:196195602-196195619

Conserved species:

panTro2,rheMac2,oryCun2,canFam2,dasNov2

Binding area:

(Transcript)	5'	UAGAAUUUAUA_____G_______________	3'
		___________AC_AG_UUA_GC_UAAAAUUG
		___________\|\|_\|\|_\|\|\|_.\|_\|\|\|\|\|\|\|.
		___________UG_UC_AAU_UG_AUUUUAAU
(miRNA)	3'	_____________A__G___A__U________	5'

UTR3

6mer

328-354

0.00581754167312505

Position on chromosome:

1:196195237-196195263

Conserved species:

panTro2,rheMac2,loxAfr3

Binding area:

(Transcript)	5'	G____UA__UCC______ACUAA_____U	3'
		_AUUA__UU___UAUAUA_____AAAUU_
		_\|.\|\|__\|\|___\|\|.\|\|\|_____\|\|\|\|\|_
		_UGAU__AA___AUGUAU_____UUUAA_
(miRNA)	3'	_____CG__U__________________U	5'

UTR3

9mer

16-42

0.100834195829241

Position on chromosome:

1:196194925-196194951

Conserved species:

panTro2,rheMac2,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	GA________UAAA___AAUA_________	3'
		__ACU_GCUU____AUA____AUAAAAUUA
		__\|\|\|_\|\|\|\|____\|\|\|____\|\|\|\|\|\|\|\|\|
		__UGA_CGAA____UAU____UAUUUUAAU
(miRNA)	3'	_____U___________G____________	5'

UTR3

8mer

3186-3201

0.0186539582678521

Position on chromosome:

1:196461417-196461432

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	AAAAUACAUUUAA__AAAG____________	3'
		_____________AG_____AC_UAAAAUUA
		_____________\|\|_____\|\|_\|\|\|\|\|\|\|\|
		_____________UC_____UG_AUUUUAAU
(miRNA)	3'	____________A__GAAUA__U________	5'

ENSG00000141232 (TOB1)

hsa-miR-590-3p

0.999902077790318

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

482-507

0.0106127930039298

Position on chromosome:

17:48940066-48940091

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,monDom5,galGal3

Binding area:

(Transcript)	5'	ACA_____GAUUUUUUUU____________	3'
		___UGGCU__________UAUA_AAAAUUG
		___\|.\|\|\|__________\|\|.\|_\|\|\|\|\|\|.
		___AUCGA__________AUGU_UUUUAAU
(miRNA)	3'	__G_____AU____________A_______	5'

UTR3

6mer

261-289

0.0128840197611577

Position on chromosome:

17:48939845-48939873

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	_____AAG____CAACUAUUCUA_______	3'
		_CUUA___ACAU___________AAAAUUG
		_\|\|\|\|___\|\|\|\|___________\|\|\|\|\|\|.
		_GAAU___UGUA___________UUUUAAU
(miRNA)	3'	C____A________________________	5'

UTR3

7mer

15-30

0.0287619075181978

Position on chromosome:

17:48939599-48939614

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,monDom5,xenTro2

Binding area:

(Transcript)	5'	UAGUUUAUAUUA_________________C	3'
		____________AGUUUGUAU_UAAAAUU_
		____________\|\|.\|\|.\|\|._\|\|\|\|\|\|\|_
		____________UCGAAUAUG_AUUUUAA_
(miRNA)	3'	___________A_________U_______U	5'

UTR3

8mer

4-30

0.109321969246044

Position on chromosome:

17:48939588-48939614

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	UA_________UAAAAUUCUU________	3'
		__AGUUUGUAU__________UAAAAUUA
		__\|\|.\|\|.\|\|.__________\|\|\|\|\|\|\|\|
		__UCGAAUAUG__________AUUUUAAU
(miRNA)	3'	_A_________U_________________	5'

ENSG00000171988 (JMJD1C)

hsa-miR-590-3p

0.999886567958716

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

3064-3085

0.00901913454686366

Position on chromosome:

10:64958390-64958411

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	GCUAUG_______GGAC____G______U	3'
		______AGUUUGU____ACAU_AAAAUU_
		______\|\|.\|\|.\|____\|\|\|\|_\|\|\|\|\|\|_
		______UCGAAUA____UGUA_UUUUAA_
(miRNA)	3'	_____A______________________U	5'

UTR3

6mer

2938-2963

0.0107717347652275

Position on chromosome:

10:64957315;64958273-64957323;64958289

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	GUC____G_GAAAAAGG____C________	3'
		___CUGG_U________AUGC__AAAAUUG
		___\|\|.\|_\|________\|\|.\|__\|\|\|\|\|\|.
		___GAUC_A________UAUG__UUUUAAU
(miRNA)	3'	__U____G_A___________UA_______	5'

UTR3

6mer

2716-2731

0.00671696463025969

Position on chromosome:

10:64954058-64954073

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3

Binding area:

(Transcript)	5'	UCACAAACAUUUA____CAACCC______	3'
		_____________AUGC______AAAUUA
		_____________\|\|.\|______\|\|\|\|\|\|
		_____________UAUG______UUUAAU
(miRNA)	3'	____________A____UAU_________	5'

UTR3

8mer

2540-2560

0.0220044373094543

Position on chromosome:

10:64952876-64952896

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	GAAUGUU____AUCACAGUA________U	3'
		_______CUUA_________AUAAAAUU_
		_______\|\|\|\|_________\|\|\|\|\|\|\|\|_
		_______GAAU_________UAUUUUAA_
(miRNA)	3'	______C____AUG______________U	5'

UTR3

6mer

2329-2351

0.00427522749792464

Position on chromosome:

10:64950836-64950858

Conserved species:

panTro2,rheMac2,rn4,canFam2

Binding area:

(Transcript)	5'	CAAAGA___UACC____AAAACC______	3'
		______ACU____CUUG______AAAUUA
		______\|\|\|____\|\|\|.______\|\|\|\|\|\|
		______UGA____GAAU______UUUAAU
(miRNA)	3'	_________UC______AUGUAU______	5'

UTR3

6mer

2075-2098

0.00541201240110746

Position on chromosome:

10:64949135-64949158

Conserved species:

panTro2,rheMac2,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,xenTro2

Binding area:

(Transcript)	5'	AAUU___UC_______UG_AAAC______C	3'
		____GCU__AG_UUGU__A____AAAAUU_
		____.\|\|__\|\|_\|\|.\|__\|____\|\|\|\|\|\|_
		____UGA__UC_AAUA__U____UUUUAA_
(miRNA)	3'	___________G____UG_A_________U	5'

UTR3

7mer

1655-1672

0.00584612475641556

Position on chromosome:

10:64945370-64945387

Conserved species:

panTro2,rheMac2,rn4,oryCun2,bosTau4,canFam2,echTel1,monDom5

Binding area:

(Transcript)	5'	AGAGUGGAGAA_______GUUU__________	3'
		___________AC_AGUU______UAAAAUUG
		___________\|\|_\|\|.\|______\|\|\|\|\|\|\|.
		___________UG_UCGA______AUUUUAAU
(miRNA)	3'	_____________A____AUAUGU________	5'