DIANA TOOLS - MicroT-CDS

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Results: 2474 targets for miRNAs hsa-miR-548h-5p

. Threshold is set to 0.7.

Name:	hsa-miR-548h-5p
Alternative description:	MIMAT0005928
Related names:
miRNA sequence:	aaaaguaaucgcgguuuuuguc
External links:	miRBase
DIANA resources:	microT-CDS
Related diseases:	Acute Disease Acute Lung Injury Breast Neoplasms Carcinoma, Hepatocellular Cell Transformation, Neoplastic Chromosome Deletion Colitis, Ulcerative Colorectal Neoplasms Cri-du-Chat Syndrome Critical Illness Disease Progression Genetic Predisposition to Disease Glioblastoma Hematologic Neoplasms Inflammation Liver Neoplasms Lymphoma, Large B-Cell, Diffuse Melanoma Microsatellite Instability Multiple Sclerosis Neoplasm Metastasis Neoplasms Neoplasms, Glandular and Epithelial Neuroblastoma Ovarian Neoplasms Prostatic Neoplasms Pulmonary Embolism Skin Neoplasms Stomach Neoplasms Wounds and Injuries

Ensembl Gene Id

miRNA name

miTG score

Also Predicted

ENSG00000136206 (SPDYE1)

hsa-miR-548h-5p

0.999806175078526

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

7mer

559-576

0.0181456737833468

Position on chromosome:

7:44048780-44048797

Conserved species:

panTro2

Binding area:

(Transcript)	5'	UCAAAUAGUUU_________UG________	3'
		___________GGAAAUUGU___UACUUUU
		___________..\|\|\|..\|.___\|\|\|\|\|\|\|
		___________UUUUUGGCG___AUGAAAA
(miRNA)	3'	__________G_________CUA_______	5'

UTR3

8mer

1008-1025

0.0432603684769062

Position on chromosome:

7:44049229-44049246

Conserved species:

panTro2

Binding area:

(Transcript)	5'	UUAUUUAUUU___UG_UAUU________A	3'
		__________AAA__U____AUUACUUU_
		__________\|\|\|__.____\|\|\|\|\|\|\|\|_
		__________UUU__G____UAAUGAAA_
(miRNA)	3'	_________U___UG_CGC_________A	5'

UTR3

7mer

1375-1395

0.0684043617174815

Position on chromosome:

7:44049596-44049616

Conserved species:

panTro2

Binding area:

(Transcript)	5'	UUGAUUU____UGU_____AU________A	3'
		_______GGCA____UUGU__GUUACUUU_
		_______\|.\|\|____..\|.__.\|\|\|\|\|\|\|_
		_______CUGU____GGCG__UAAUGAAA_
(miRNA)	3'	___________UUUU____C_________A	5'

UTR3

6mer

1477-1492

0.0206093647045539

Position on chromosome:

7:44049698-44049713

Conserved species:

panTro2

Binding area:

(Transcript)	5'	UUGGGGAAACGUA_____________________	3'
		_____________AUAAAAA___UGA__ACUUUU
		_____________\|.\|\|\|\|\|___.\|\|__\|\|\|\|\|\|
		_____________UGUUUUU___GCU__UGAAAA
(miRNA)	3'	____________C_______GGC___AA______	5'

ENSG00000213366 (GSTM2)

hsa-miR-548h-5p

0.999546347209658

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

9mer

141-162

0.0554912225700324

Position on chromosome:

1:110251340-110251361

Conserved species:

panTro2

Binding area:

(Transcript)	5'	CAUUUAU___UU___CAAAUU_________	3'
		_______CAG___CC______AUUACUUUU
		_______\|\|.___\|\|______\|\|\|\|\|\|\|\|\|
		_______GUU___GG______UAAUGAAAA
(miRNA)	3'	______U___UUU__CGC____________	5'

UTR3

7mer

164-188

0.0583689902889572

Position on chromosome:

1:110251363-110251387

Conserved species:

panTro2

Binding area:

(Transcript)	5'	UUU___UUUCUUA___CUGUC_______A	3'
		___ACA_______CGC_____UUACUUU_
		___\|\|\|_______\|\|\|_____\|\|\|\|\|\|\|_
		___UGU_______GCG_____AAUGAAA_
(miRNA)	3'	__C___UUUUG_____CU__________A	5'

UTR3

7mer

744-768

0.0226567913174927

Position on chromosome:

1:110251943-110251967

Conserved species:

panTro2

Binding area:

(Transcript)	5'	CAUA___CCUU___A____GUUC_______	3'
		____GAC____AUC_G_GA____UACUUUU
		____\|\|\|____\|.\|_\|_\|\|____\|\|\|\|\|\|\|
		____CUG____UGG_C_CU____AUGAAAA
(miRNA)	3'	_______UUUU_____G__A__________	5'

ENSG00000198963 (RORB)

hsa-miR-548h-5p

0.998316933420771

Gene details
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miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

311-331

0.00533057888867673

Position on chromosome:

9:77300846-77300866

Conserved species:

panTro2,rheMac2,oryCun2,canFam2,dasNov2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	GAUAUAU_______AAGA___________A	3'
		_______ACAAGAA____GCGG_UACUUU_
		_______\|\|\|\|.\|\|____\|\|\|._\|\|\|\|\|\|_
		_______UGUUUUU____CGCU_AUGAAA_
(miRNA)	3'	______C_______GG______A______A	5'

UTR3

9mer

318-345

0.0183305070762118

Position on chromosome:

9:77300853-77300880

Conserved species:

panTro2,rheMac2,rn4,oryCun2,bosTau4,canFam2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	A______G_UACUUUACA___________	3'
		_AAGAGC_G_________UGAUUACUUUU
		_\|\|.\|.\|_\|_________.\|\|\|\|\|\|\|\|\|\|
		_UUUUUG_C_________GCUAAUGAAAA
(miRNA)	3'	G______G_____________________	5'

UTR3

6mer

851-868

0.00333612940079523

Position on chromosome:

9:77301386-77301403

Conserved species:

panTro2,rheMac2,oryCun2,canFam2,loxAfr3

Binding area:

(Transcript)	5'	CAGAUAACAUU_____GU__AA__________	3'
		___________GCAAG__CC__G___ACUUUU
		___________.\|\|\|.__\|\|__\|___\|\|\|\|\|\|
		___________UGUUU__GG__C___UGAAAA
(miRNA)	3'	__________C_____UU__CG_UAA______	5'

UTR3

6mer

910-923

0.00214456601962404

Position on chromosome:

9:77301445-77301458

Conserved species:

panTro2

Binding area:

(Transcript)	5'	UUUUCACCAGAACAC_____________________	3'
		_______________AUAAAAAC_______ACUUUU
		_______________\|.\|\|\|\|\|\|_______\|\|\|\|\|\|
		_______________UGUUUUUG_______UGAAAA
(miRNA)	3'	______________C________GCGCUAA______	5'

UTR3

6mer

1351-1377

0.00217773423302315

Position on chromosome:

9:77301886-77301912

Conserved species:

panTro2,bosTau4

Binding area:

(Transcript)	5'	AC__UA_A___AUUUUUUUAGCA______	3'
		__CC__G_AUU____________ACUUUU
		__\|\|__\|_\|\|\|____________\|\|\|\|\|\|
		__GG__C_UAA____________UGAAAA
(miRNA)	3'	_U__CG_______________________	5'

UTR3

6mer

4351-4356

0.00398473045539923

Position on chromosome:

9:77304886-77304891

Conserved species:

panTro2,rheMac2,rn4,mm9,canFam2,dasNov2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	CCUGACUCUUUUUUUUUCUAUAA______	3'
		_______________________ACUUUU
		_______________________\|\|\|\|\|\|
		_______________________UGAAAA
(miRNA)	3'	______________________A______	5'

UTR3

6mer

5249-5273

0.00179299676436444

Position on chromosome:

9:77305784-77305808

Conserved species:

panTro2,canFam2

Binding area:

(Transcript)	5'	GCCA___GG________UCUUGCC______	3'
		____GGG__CUG_GAUU_______ACUUUU
		____...__\|.\|_\|\|\|\|_______\|\|\|\|\|\|
		____UUU__GGC_CUAA_______UGAAAA
(miRNA)	3'	___G___UU___G_________________	5'

UTR3

6mer

5459-5486

0.0042251754579672

Position on chromosome:

9:77305994-77306021

Conserved species:

panTro2,rheMac2,rn4,mm9,bosTau4,canFam2,dasNov2,loxAfr3,monDom5

Binding area:

(Transcript)	5'	A___GG_GG___UCUGUU__UGC______	3'
		_GAU__G__UUG______UG___ACUUUU
		_\|\|.__.__..\|______.\|___\|\|\|\|\|\|
		_CUG__U__GGC______GC___UGAAAA
(miRNA)	3'	____UU_UU___________UAA______	5'

UTR3

9mer

5926-5942

0.0160416993168568

Position on chromosome:

9:77306461-77306477

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	AAAAUAUUUUUU__________A_________	3'
		____________CAAA___UGU_AUUACUUUU
		____________\|\|\|\|___.\|._\|\|\|\|\|\|\|\|\|
		____________GUUU___GCG_UAAUGAAAA
(miRNA)	3'	___________U____UUG___C_________	5'

UTR3

7mer

7052-7072

0.00871364236916806

Position on chromosome:

9:77307587-77307607

Conserved species:

panTro2,rheMac2,canFam2

Binding area:

(Transcript)	5'	ACUCUAAA______AAUAAUUC_______	3'
		________AAGAAU________UACUUUU
		________\|\|.\|\|.________\|\|\|\|\|\|\|
		________UUUUUG________AUGAAAA
(miRNA)	3'	_______G______GCGCUA_________	5'

UTR3

8mer

7360-7383

0.0489915468673736

Position on chromosome:

9:77307895-77307918

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	CAAU______AGA__UUUAU________A	3'
		____UAAAAA___GU_____AUUACUUU_
		____.\|\|\|\|\|___\|._____\|\|\|\|\|\|\|\|_
		____GUUUUU___CG_____UAAUGAAA_
(miRNA)	3'	___U______GG___C____________A	5'

ENSG00000145012 (LPP)

hsa-miR-548h-5p

0.998171215184053

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

291-307

0.00982980885711522

Position on chromosome:

3:188592559-188592575

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	CUUUUAAUCCCU_UG_U__UCUC______	3'
		____________A__U_UG____ACUUUU
		____________\|__._.\|____\|\|\|\|\|\|
		____________U__G_GC____UGAAAA
(miRNA)	3'	___________U_UG_C__UAA_______	5'

UTR3

7mer

1062-1083

0.00927044859620987

Position on chromosome:

3:188593330-188593351

Conserved species:

panTro2,oryCun2,canFam2,dasNov2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	AACUGU____UU____UU___U_______C	3'
		______GCAG___UUG__UGG_UUACUUU_
		______.\|\|.___..\|__.\|._\|\|\|\|\|\|\|_
		______UGUU___GGC__GCU_AAUGAAA_
(miRNA)	3'	_____C____UUU________________A	5'

UTR3

6mer

1275-1295

0.00205993556976779

Position on chromosome:

3:188593543-188593563

Conserved species:

panTro2

Binding area:

(Transcript)	5'	CUCUGCCU______UUU___CAA______	3'
		________AGAAUC___AUU___ACUUUU
		________\|.\|\|.\|___\|\|\|___\|\|\|\|\|\|
		________UUUUGG___UAA___UGAAAA
(miRNA)	3'	_______U______CGC____________	5'

UTR3

7mer

1447-1472

0.00420855552180979

Position on chromosome:

3:188593715-188593740

Conserved species:

panTro2,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3

Binding area:

(Transcript)	5'	CUU____UCU__CACAA_UAUA_______	3'
		___CAAA___CC_____G____UACUUUU
		___\|\|\|\|___\|\|_____\|____\|\|\|\|\|\|\|
		___GUUU___GG_____C____AUGAAAA
(miRNA)	3'	__U____UU___CG____UA_________	5'

UTR3

8mer

2752-2771

0.0164289743386954

Position on chromosome:

3:188595020-188595039

Conserved species:

panTro2

Binding area:

(Transcript)	5'	AACAGAGA__A__________________A	3'
		________GA_AAAGAUUGU_AUUACUUU_
		________\|\|_\|\|\|.\|..\|._\|\|\|\|\|\|\|\|_
		________CU_UUUUUGGCG_UAAUGAAA_
(miRNA)	3'	__________G_________C________A	5'

UTR3

9mer

3404-3430

0.00618164637496173

Position on chromosome:

3:188595672-188595698

Conserved species:

panTro2

Binding area:

(Transcript)	5'	GA____CUUCU___AUCAAA_________	3'
		__GCAA_____CUG______AUUACUUUU
		__.\|\|\|_____\|.\|______\|\|\|\|\|\|\|\|\|
		__UGUU_____GGC______UAAUGAAAA
(miRNA)	3'	_C____UUU_____GC_____________	5'

UTR3

6mer

4315-4331

0.00135207885929615

Position on chromosome:

3:188596583-188596599

Conserved species:

panTro2

Binding area:

(Transcript)	5'	AGAAAAGAAAGA__G_______A___________	3'
		____________GA_AGAAGUC______ACUUUU
		____________\|\|_\|.\|\|..\|______\|\|\|\|\|\|
		____________CU_UUUUUGG______UGAAAA
(miRNA)	3'	______________G_______CGCUAA______	5'

UTR3

6mer

4644-4668

0.00152772548893371

Position on chromosome:

3:188596912-188596936

Conserved species:

panTro2,rheMac2,dasNov2

Binding area:

(Transcript)	5'	ACUU______UAA_UA__AUGAA______	3'
		____GACAGA___C__GA_____ACUUUU
		____\|\|\|\|.\|___\|__\|\|_____\|\|\|\|\|\|
		____CUGUUU___G__CU_____UGAAAA
(miRNA)	3'	__________UUG_CG__AA_________	5'

UTR3

6mer

4822-4829

0.00165644596574441

Position on chromosome:

3:188597090-188597097

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	CUCCUCUUCUUAUUUUCUUU_____________C	3'
		____________________CC_____UACUUU_
		____________________\|\|_____\|\|\|\|\|\|_
		____________________GG_____AUGAAA_
(miRNA)	3'	___________________U__CGCUA______A	5'

UTR3

8mer

7126-7143

0.00511865770508526

Position on chromosome:

3:188599394-188599411

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	CCAUGUCUACA_____UU_______________	3'
		___________GACAG___CUG___UUACUUUU
		___________\|\|\|\|.___\|.\|___\|\|\|\|\|\|\|\|
		___________CUGUU___GGC___AAUGAAAA
(miRNA)	3'	________________UUU___GCU________	5'

UTR3

6mer

7324-7350

0.00214099222686777

Position on chromosome:

3:188599592-188599618

Conserved species:

panTro2

Binding area:

(Transcript)	5'	A___UU___ACUUUAUA___UC______A	3'
		_AUA__AAC________GGU__UACUUU_
		_\|.\|__\|\|\|________\|.\|__\|\|\|\|\|\|_
		_UGU__UUG________CUA__AUGAAA_
(miRNA)	3'	C___UU___GCG________________A	5'

UTR3

7mer

8414-8441

0.00361308959319996

Position on chromosome:

3:188600682-188600709

Conserved species:

panTro2

Binding area:

(Transcript)	5'	C___C_____A__UAAUUUUUUUUG_______	3'
		_GCG____CC_GC____________UACUUUU
		_.\|.____\|\|_\|\|____________\|\|\|\|\|\|\|
		_UGU____GG_CG____________AUGAAAA
(miRNA)	3'	C___UUUU_____CUA________________	5'

UTR3

9mer

8733-8749

0.00944953497123028

Position on chromosome:

3:188601001-188601017

Conserved species:

panTro2,rheMac2,rn4,mm9

Binding area:

(Transcript)	5'	UGUUUUGUUUUG______________________	3'
		____________GGCA____UUGC_AUUACUUUU
		____________\|.\|\|____..\|\|_\|\|\|\|\|\|\|\|\|
		____________CUGU____GGCG_UAAUGAAAA
(miRNA)	3'	________________UUUU____C_________	5'

UTR3

6mer

8827-8842

0.00146881151836799

Position on chromosome:

3:188601095-188601110

Conserved species:

panTro2,rheMac2,bosTau4,loxAfr3,monDom5

Binding area:

(Transcript)	5'	UGAGUUUUUUUG____U___UG______C	3'
		____________UUGC_GGU__UACUUU_
		____________..\|\|_\|.\|__\|\|\|\|\|\|_
		____________GGCG_CUA__AUGAAA_
(miRNA)	3'	___________U________________A	5'

UTR3

6mer

10638-10658

0.0016815211703374

Position on chromosome:

3:188602906-188602926

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UGUACCUU_____UG___UUUCC______	3'
		________UAGGG__UGC_____ACUUUU
		________.\|...__.\|\|_____\|\|\|\|\|\|
		________GUUUU__GCG_____UGAAAA
(miRNA)	3'	_______U_____UG___CUAA_______	5'

UTR3

6mer

11317-11337

0.00201110928609713

Position on chromosome:

3:188603585-188603605

Conserved species:

panTro2

Binding area:

(Transcript)	5'	UCUCCAGC___U__U___UCCUG______	3'
		________ACC_GU_GUU_____ACUUUU
		________\|\|\|_\|._.\|\|_____\|\|\|\|\|\|
		________UGG_CG_UAA_____UGAAAA
(miRNA)	3'	_______U______C______________	5'

UTR3

6mer

13642-13657

0.00196186852897174

Position on chromosome:

3:188605910-188605925

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	GCAUGUUUUCUGU____U_________________	3'
		_____________AUAA_AAACC______ACUUUU
		_____________\|.\|\|_\|\|\|\|\|______\|\|\|\|\|\|
		_____________UGUU_UUUGG______UGAAAA
(miRNA)	3'	____________C__________CGCUAA______	5'

UTR3

8mer

14104-14124

0.0105400112330417

Position on chromosome:

3:188606372-188606392

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	UAAAUAUA___UCUAUU________________	3'
		________GGC______AACU____UUACUUUU
		________\|.\|______\|\|\|.____\|\|\|\|\|\|\|\|
		________CUG______UUGG____AAUGAAAA
(miRNA)	3'	___________UUU_______CGCU________	5'

UTR3

8mer

14681-14702

0.0110490633200133

Position on chromosome:

3:188606949-188606970

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3

Binding area:

(Transcript)	5'	CCUUGC____U___UUAGA___________G	3'
		______CAGA__CC_____GC_AUUACUUU_
		______\|\|.\|__\|\|_____\|\|_\|\|\|\|\|\|\|\|_
		______GUUU__GG_____CG_UAAUGAAA_
(miRNA)	3'	_____U____UU_________C________A	5'

UTR3

7mer

15322-15341

0.00356853720828827

Position on chromosome:

3:188607590-188607609

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UGACUCUUU________G_____________	3'
		_________GGCAAAAG__GUGA_UACUUUU
		_________\|.\|\|\|\|\|.__\|.\|\|_\|\|\|\|\|\|\|
		_________CUGUUUUU__CGCU_AUGAAAA
(miRNA)	3'	_________________GG____A_______	5'

UTR3

6mer

16136-16153

0.00859099730268596

Position on chromosome:

3:188608404-188608421

Conserved species:

panTro2,rheMac2,oryCun2,echTel1

Binding area:

(Transcript)	5'	UUUUCUGUAA_________AAC______A	3'
		__________AAGAGUUGC___UACUUU_
		__________\|\|.\|...\|\|___\|\|\|\|\|\|_
		__________UUUUUGGCG___AUGAAA_
(miRNA)	3'	_________G_________CUA______A	5'

ENSG00000213923 (CSNK1E)

hsa-miR-548h-5p

0.99768475355998

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

139-162

0.0661304503145801

Position on chromosome:

22:38686836-38686859

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2

Binding area:

(Transcript)	5'	AUUA______AAA__UUUUU________G	3'
		____AAGAGC___GC_____AUUACUUU_
		____\|\|.\|.\|___\|\|_____\|\|\|\|\|\|\|\|_
		____UUUUUG___CG_____UAAUGAAA_
(miRNA)	3'	___G______G____C____________A	5'

UTR3

7mer

79-107

0.0259899620439176

Position on chromosome:

22:38686776-38686804

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	_______UU___GGGGAAUUUUG_______	3'
		_AAGAAC__UGG___________UACUUUU
		_\|\|.\|\|\|__.\|.___________\|\|\|\|\|\|\|
		_UUUUUG__GCU___________AUGAAAA
(miRNA)	3'	G______GC___A_________________	5'

UTR3

6mer

55-75

0.0177264777272993

Position on chromosome:

22:38686752-38686772

Conserved species:

rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,monDom5,galGal3,xenTro2

Binding area:

(Transcript)	5'	CUUUUUUC_____UAAAUAUUGG______	3'
		________CUGUG__________ACUUUU
		________\|.\|.\|__________\|\|\|\|\|\|
		________GGCGC__________UGAAAA
(miRNA)	3'	_______U_____UAA_____________	5'

ENSG00000163848 (ZNF148)

hsa-miR-548h-5p

0.997106743761309

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

6137-6154

0.0448415073726192

Position on chromosome:

3:124950542-124950559

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	CUCCACUAUU________UA_________A	3'
		__________UAAAAGCC___AUUACUUU_
		__________.\|\|\|\|.\|\|___\|\|\|\|\|\|\|\|_
		__________GUUUUUGG___UAAUGAAA_
(miRNA)	3'	_________U________CGC________A	5'

UTR3

6mer

6110-6128

0.00608835381384276

Position on chromosome:

3:124950515-124950533

Conserved species:

panTro2,rheMac2,rn4,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	UUAAAAAUAU___U_____UUCA__________	3'
		__________GCA___ACU____GA__ACUUUU
		__________.\|\|___\|\|.____\|\|__\|\|\|\|\|\|
		__________UGU___UGG____CU__UGAAAA
(miRNA)	3'	_________C___UUU___CG____AA______	5'

UTR3

7mer

5885-5904

0.0156278864460637

Position on chromosome:

3:124950290-124950309

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,dasNov2,echTel1

Binding area:

(Transcript)	5'	GUUUUAAA__UU_______AUU_______A	3'
		________GC___AAUUGU___UUACUUU_
		________.\|___\|\|..\|.___\|\|\|\|\|\|\|_
		________UG___UUGGCG___AAUGAAA_
(miRNA)	3'	_______C__UUU______CU________A	5'

UTR3

8mer

5595-5619

0.0142659991062283

Position on chromosome:

3:124950000-124950024

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	AAUU___UAUUUU___U___G________	3'
		____GCA______AUC_UGA_UUACUUUU
		____.\|\|______\|.\|_.\|\|_\|\|\|\|\|\|\|\|
		____UGU______UGG_GCU_AAUGAAAA
(miRNA)	3'	___C___UUU______C____________	5'

UTR3

6mer

5358-5363

0.00445630628109353

Position on chromosome:

3:124949763-124949768

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3

Binding area:

(Transcript)	5'	UUUAUGUAUAUAUACACACACAC______	3'
		_______________________ACUUUU
		_______________________\|\|\|\|\|\|
		_______________________UGAAAA
(miRNA)	3'	______________________A______	5'

UTR3

6mer

5273-5292

0.00139129413760975

Position on chromosome:

3:124949678-124949697

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2

Binding area:

(Transcript)	5'	UUAGUUAUU___UCU______UACA______	3'
		_________GAC_____UUGU____ACUUUU
		_________\|\|\|_____..\|.____\|\|\|\|\|\|
		_________CUG_____GGCG____UGAAAA
(miRNA)	3'	____________UUUUU____CUAA______	5'

UTR3

6mer

4423-4440

0.00355436252288311

Position on chromosome:

3:124948828-124948845

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3

Binding area:

(Transcript)	5'	UCUUUAAAUCU___U____G__AG________	3'
		___________ACA__AAU_GC____ACUUUU
		___________\|\|\|__\|\|._\|\|____\|\|\|\|\|\|
		___________UGU__UUG_CG____UGAAAA
(miRNA)	3'	__________C___UU___G__CUAA______	5'

UTR3

6mer

4072-4100

0.00290049716095574

Position on chromosome:

3:124948477-124948505

Conserved species:

panTro2,rheMac2,oryCun2,dasNov2,loxAfr3

Binding area:

(Transcript)	5'	______A___U___ACACCCUUAA______	3'
		_AAAAC_UGC_GGU__________ACUUUU
		_\|\|\|\|\|_.\|\|_\|.\|__________\|\|\|\|\|\|
		_UUUUG_GCG_CUA__________UGAAAA
(miRNA)	3'	U_____________A_______________	5'

UTR3

6mer

3172-3188

0.00304977590090392

Position on chromosome:

3:124947577-124947593

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,monDom5

Binding area:

(Transcript)	5'	UAAACGUGUCUU__________AA__________	3'
		____________GACA___AUC__GG__ACUUUU
		____________\|\|\|\|___\|.\|__\|.__\|\|\|\|\|\|
		____________CUGU___UGG__CU__UGAAAA
(miRNA)	3'	________________UUU___CG__AA______	5'

UTR3

6mer

2210-2220

0.00607034008861978

Position on chromosome:

3:124946615-124946625

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,monDom5,galGal3

Binding area:

(Transcript)	5'	GGAUUUGCUAGUCCACUU____C_________	3'
		__________________CUGU____ACUUUU
		__________________\|.\|.____\|\|\|\|\|\|
		__________________GGCG____UGAAAA
(miRNA)	3'	_________________U____CUAA______	5'

UTR3

6mer

1279-1305

0.00401763224260003

Position on chromosome:

3:124945684-124945710

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4

Binding area:

(Transcript)	5'	AU_______AUUUUUAAAUAUAA______	3'
		__UUGUGAU______________ACUUUU
		__..\|.\|\|\|______________\|\|\|\|\|\|
		__GGCGCUA______________UGAAAA
(miRNA)	3'	_U_______A___________________	5'

UTR3

7mer

895-916

0.0100055852514482

Position on chromosome:

3:124945300-124945321

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	ACUAAA________UUU__CU_______A	3'
		______GGAAGUUG___UG__UUACUUU_
		______..\|\|...\|___.\|__\|\|\|\|\|\|\|_
		______UUUUUGGC___GC__AAUGAAA_
(miRNA)	3'	_____G_____________U________A	5'

UTR3

9mer

2025-2047

0.0359258017301244

Position on chromosome:

3:125007046-125007068

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	CUAUAA___U_____AG_AA_________	3'
		______GCG_AAAGC__G__AUUACUUUU
		______.\|._\|\|\|.\|__\|__\|\|\|\|\|\|\|\|\|
		______UGU_UUUUG__C__UAAUGAAAA
(miRNA)	3'	_____C_________G__GC_________	5'

ENSG00000137770 (CTDSPL2)

hsa-miR-548h-5p

0.996831681088821

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer+mismatch

58-78

0.0305634360119459

Position on chromosome:

15:44816431-44816451

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,tetNig2,fr2,danRer6

Binding area:

(Transcript)	5'	ACUAA_________AU___C______GUU	3'
		_____GACAAAAAC__UGC_AUUACU___
		_____\|\|\|\|\|\|\|\|\|__.\|\|_\|\|\|\|\|\|___
		_____CUGUUUUUG__GCG_UAAUGA___
(miRNA)	3'	___________________C______A__	5'

UTR3

6mer

333-354

0.00683002297411875

Position on chromosome:

15:44816706-44816727

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,dasNov2,monDom5

Binding area:

(Transcript)	5'	GAUAAUA________GAAAA___________	3'
		_______ACAGAGAU_____UGG__ACUUUU
		_______\|\|\|.\|.\|._____.\|.__\|\|\|\|\|\|
		_______UGUUUUUG_____GCU__UGAAAA
(miRNA)	3'	______C________GC______AA______	5'

UTR3

6mer

373-399

0.00643489461691333

Position on chromosome:

15:44816746-44816772

Conserved species:

panTro2,rheMac2,rn4,oryCun2,bosTau4,canFam2,dasNov2,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	GU__UCU__G_______UGUAGCC______	3'
		__GC___AA_UG_GGUU_______ACUUUU
		__.\|___\|\|_.\|_\|.\|\|_______\|\|\|\|\|\|
		__UG___UU_GC_CUAA_______UGAAAA
(miRNA)	3'	_C__UUU__G__G_________________	5'

UTR3

7mer

390-409

0.0186387299858685

Position on chromosome:

15:44816763-44816782

Conserved species:

rheMac2,rn4,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	GGGUUUGU____ACUUUUCU________A	3'
		________AGCC________GUUACUUU_
		________\|.\|\|________.\|\|\|\|\|\|\|_
		________UUGG________UAAUGAAA_
(miRNA)	3'	_______U____CGC_____________A	5'

UTR3

7mer

636-655

0.01086407267451

Position on chromosome:

15:44817009-44817028

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	AUAUUUGUU_______AUUCUC_______	3'
		_________UAAAAAU______UACUUUU
		_________.\|\|\|\|\|.______\|\|\|\|\|\|\|
		_________GUUUUUG______AUGAAAA
(miRNA)	3'	________U_______GCGCUA_______	5'

UTR3

6mer

1356-1370

0.00408457409584725

Position on chromosome:

15:44817729-44817743

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	UGUAAAGGAUGUCA______G____________	3'
		______________AAGAAC_GC____ACUUUU
		______________\|\|.\|\|\|_\|\|____\|\|\|\|\|\|
		______________UUUUUG_CG____UGAAAA
(miRNA)	3'	_____________G______G__CUAA______	5'

UTR3

6mer

2227-2242

0.002430478386042

Position on chromosome:

15:44818600-44818615

Conserved species:

panTro2,rheMac2,canFam2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	GGGCACUUCAAUA_________A___________	3'
		_____________AUAAAAACC______ACUUUU
		_____________\|.\|\|\|\|\|\|\|______\|\|\|\|\|\|
		_____________UGUUUUUGG______UGAAAA
(miRNA)	3'	____________C_________CGCUAA______	5'

UTR3

6mer

2751-2773

0.00268627034100775

Position on chromosome:

15:44819124-44819146

Conserved species:

panTro2,rn4,mm9,oryCun2,bosTau4,dasNov2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	CUAUUU__A_____AAAUGUCUG______	3'
		______CC_GUGGU_________ACUUUU
		______\|\|_\|.\|.\|_________\|\|\|\|\|\|
		______GG_CGCUA_________UGAAAA
(miRNA)	3'	_____U________A______________	5'

UTR3

7mer

3161-3185

0.00380609407622503

Position on chromosome:

15:44819534-44819558

Conserved species:

rheMac2,canFam2

Binding area:

(Transcript)	5'	AAU___UUUUUC___UA__UC_______C	3'
		___GAC______AUC__GA__UUACUUU_
		___\|\|\|______\|.\|__\|\|__\|\|\|\|\|\|\|_
		___CUG______UGG__CU__AAUGAAA_
(miRNA)	3'	______UUUU_____CG___________A	5'

UTR3

6mer

4579-4603

0.00779972052048708

Position on chromosome:

15:44820952-44820976

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3

Binding area:

(Transcript)	5'	GUA__AAU____AA___AAUAC______C	3'
		___GA___AAGC__UGA_____UACUUU_
		___\|\|___\|\|.\|__.\|\|_____\|\|\|\|\|\|_
		___CU___UUUG__GCU_____AUGAAA_
(miRNA)	3'	_____GUU____GC___A__________A	5'

UTR3

6mer

4832-4854

0.0122806322276037

Position on chromosome:

15:44821205-44821227

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2

Binding area:

(Transcript)	5'	GGGUUG______GGAUAAAUAAA______	3'
		______UUGUGG___________ACUUUU
		______..\|.\|.___________\|\|\|\|\|\|
		______GGCGCU___________UGAAAA
(miRNA)	3'	_____U______AA_______________	5'

UTR3

8mer

917-938

0.0075249401130843

Position on chromosome:

15:44791960-44791981

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	AUGAGCU_G____UG_A__AC________	3'
		_______A_AAGA__C_GC__UUACUUUU
		_______\|_\|\|.\|__\|_\|\|__\|\|\|\|\|\|\|\|
		_______U_UUUU__G_CG__AAUGAAAA
(miRNA)	3'	______C_G____UG____CU________	5'

ENSG00000154654 (NCAM2)

hsa-miR-548h-5p

0.996823145172023

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

7mer

1610-1631

0.00490347103310013

Position on chromosome:

21:22911889-22911910

Conserved species:

panTro2

Binding area:

(Transcript)	5'	CAGCCAA__AGA_______AAG_________	3'
		_______GG___GAAAACU_____UACUUUU
		_______\|.___.\|\|\|\|\|._____\|\|\|\|\|\|\|
		_______CU___UUUUUGG_____AUGAAAA
(miRNA)	3'	_________G_________CGCUA_______	5'

UTR3

7mer

3427-3452

0.00872410090991318

Position on chromosome:

21:22913706-22913731

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UA_____CUAU_____AUAAU_______A	3'
		__AUAAA____ACUGU_____UUACUUU_
		__\|.\|\|\|____\|\|.\|._____\|\|\|\|\|\|\|_
		__UGUUU____UGGCG_____AAUGAAA_
(miRNA)	3'	_C_____U________CU__________A	5'

UTR3

8mer+mismatch

3576-3598

0.00139025344276913

Position on chromosome:

21:22913855-22913877

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UUGUAA_________AA_A___A______	3'
		______GACAAAGAC__C_GAU_ACUUUU
		______\|\|\|\|\|\|.\|\|__\|_\|\|\|_\|\|\|\|\|\|
		______CUGUUUUUG__G_CUA_UGAAAA
(miRNA)	3'	_______________GC_____A______	5'

UTR3

8mer

4413-4433

0.00994117525856004

Position on chromosome:

21:22914692-22914712

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UAUUCUU_G______AGUUU________A	3'
		_______A_AAAAAU_____AUUACUUU_
		_______\|_\|\|\|\|\|._____\|\|\|\|\|\|\|\|_
		_______U_UUUUUG_____UAAUGAAA_
(miRNA)	3'	______C_G______GCGC_________A	5'

UTR3

7mer

5348-5364

0.0191858594977718

Position on chromosome:

21:22915627-22915643

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,canFam2,dasNov2,loxAfr3,echTel1,galGal3

Binding area:

(Transcript)	5'	AUUUGUAUAUUA____U__A_____________	3'
		____________AUAG_AA____GA_UACUUUU
		____________\|.\|._\|\|____\|\|_\|\|\|\|\|\|\|
		____________UGUU_UU____CU_AUGAAAA
(miRNA)	3'	___________C____U__GGCG__A_______	5'

UTR3

7mer

5352-5369

0.0605170833575426

Position on chromosome:

21:22915631-22915648

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	AUAUUAAUAG_______ACUU________A	3'
		__________UAAAGAU_____UUACUUU_
		__________.\|\|\|.\|._____\|\|\|\|\|\|\|_
		__________GUUUUUG_____AAUGAAA_
(miRNA)	3'	_________U_______GCGCU_______A	5'

ENSG00000170989 (S1PR1)

hsa-miR-548h-5p

0.995451805411962

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

7mer

485-498

0.0213132143451274

Position on chromosome:

1:101706175-101706188

Conserved species:

panTro2,rheMac2,rn4,oryCun2,bosTau4,canFam2

Binding area:

(Transcript)	5'	AUACCCCUCCUCAA___UCUU_______A	3'
		______________CGU____UUACUUU_
		______________\|\|.____\|\|\|\|\|\|\|_
		______________GCG____AAUGAAA_
(miRNA)	3'	_____________G___CU_________A	5'

UTR3

6mer

907-928

0.00623894490499755

Position on chromosome:

1:101706597-101706618

Conserved species:

panTro2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3

Binding area:

(Transcript)	5'	CAAAUAU____U______UCUU___C_______	3'
		_______GACA____CUG____UGG__ACUUUU
		_______\|\|\|\|____\|.\|____.\|.__\|\|\|\|\|\|
		_______CUGU____GGC____GCU__UGAAAA
(miRNA)	3'	___________UUUU__________AA______	5'

UTR3

7mer

990-1008

0.00761408362496441

Position on chromosome:

1:101706680-101706698

Conserved species:

panTro2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	UUGUAUUUUG_____UUAAAAG_______	3'
		__________UUGUG_______UACUUUU
		__________..\|.\|_______\|\|\|\|\|\|\|
		__________GGCGC_______AUGAAAA
(miRNA)	3'	_________U_____UA____________	5'

UTR3

8mer

1122-1136

0.0373247994711326

Position on chromosome:

1:101706812-101706826

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	CCUCUUGUGCCCU___________________A	3'
		_____________UAAAAGC____AUUACUUU_
		_____________.\|\|\|\|.\|____\|\|\|\|\|\|\|\|_
		_____________GUUUUUG____UAAUGAAA_
(miRNA)	3'	____________U_______GCGC________A	5'

UTR3

6mer

1141-1163

0.0028315986360269

Position on chromosome:

1:101706831-101706853

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UUAACU_____GG_A___CAGAA______	3'
		______GGUAG__A_CGC_____ACUUUU
		______\|..\|.__\|_\|\|\|_____\|\|\|\|\|\|
		______CUGUU__U_GCG_____UGAAAA
(miRNA)	3'	___________UU_G___CUAA_______	5'

UTR3

6mer

1305-1321

0.010011180385905

Position on chromosome:

1:101706995-101707011

Conserved species:

panTro2,rheMac2,mm9,oryCun2,canFam2,dasNov2,echTel1,monDom5

Binding area:

(Transcript)	5'	GAAUAGUAUUUA_____UUU______________	3'
		____________AUAGG___CUG_____ACUUUU
		____________\|.\|..___\|.\|_____\|\|\|\|\|\|
		____________UGUUU___GGC_____UGAAAA
(miRNA)	3'	___________C_____UU____GCUAA______	5'

UTR3

6mer

1336-1355

0.0134407803544128

Position on chromosome:

1:101707026-101707045

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	UCAUUUUGC___U_____UUAUCA______	3'
		_________ACA__AGCU______ACUUUU
		_________\|\|\|__\|.\|.______\|\|\|\|\|\|
		_________UGU__UUGG______UGAAAA
(miRNA)	3'	________C___UU____CGCUAA______	5'

ENSG00000134057 (CCNB1)

hsa-miR-548h-5p

0.994427891170518

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

61-85

0.0352547976435221

Position on chromosome:

5:68473520-68473544

Conserved species:

panTro2,oryCun2,bosTau4,canFam2,loxAfr3

Binding area:

(Transcript)	5'	CUGU___UAUU____U__CAU________	3'
		____ACA____ACUG_UG___UUACUUUU
		____\|\|\|____\|\|.\|_.\|___\|\|\|\|\|\|\|\|
		____UGU____UGGC_GC___AAUGAAAA
(miRNA)	3'	___C___UUU________U__________	5'

UTR3

8mer

87-113

0.0228939530153038

Position on chromosome:

5:68473546-68473572

Conserved species:

panTro2,rheMac2,monDom5

Binding area:

(Transcript)	5'	UA______C______CCCCUU________	3'
		__AUAAAG_UUGUGG______UUACUUUU
		__\|.\|\|\|._..\|.\|.______\|\|\|\|\|\|\|\|
		__UGUUUU_GGCGCU______AAUGAAAA
(miRNA)	3'	_C______U____________________	5'

UTR3

7mer

267-286

0.0167333542778622

Position on chromosome:

5:68473726-68473745

Conserved species:

panTro2,rheMac2,oryCun2

Binding area:

(Transcript)	5'	CUUGUUUU___U_________CUU_______A	3'
		________AUA___ACC_UGG___UUACUUU_
		________\|.\|___\|\|\|_.\|.___\|\|\|\|\|\|\|_
		________UGU___UGG_GCU___AAUGAAA_
(miRNA)	3'	_______C___UUU___C_____________A	5'

UTR3

8mer

454-481

0.0205571485374394

Position on chromosome:

5:68473913-68473940

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	G____C_UAAUUCUAAGUUAU________	3'
		_CUGC_A______________UUACUUUU
		_\|.\|\|_\|______________\|\|\|\|\|\|\|\|
		_GGCG_U______________AAUGAAAA
(miRNA)	3'	U____C_______________________	5'

ENSG00000136603 (SKIL)

hsa-miR-548h-5p

0.994064234341893

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

7mer

186-210

0.016642743257714

Position on chromosome:

3:170110392-170110416

Conserved species:

panTro2,rheMac2,rn4,bosTau4,dasNov2,monDom5,galGal3

Binding area:

(Transcript)	5'	AAUG____UG_A__UUUCUUUG_______	3'
		____AAAA__U_UG________UACUUUU
		____\|\|\|\|__._.\|________\|\|\|\|\|\|\|
		____UUUU__G_GC________AUGAAAA
(miRNA)	3'	___G____UG_C__UA_____________	5'

UTR3

7mer

280-304

0.0146879841755374

Position on chromosome:

3:170110486-170110510

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,loxAfr3

Binding area:

(Transcript)	5'	UAAU_____CUUAAC________________	3'
		____GCAAA______AAUUGUG__UACUUUU
		____.\|\|\|\|______\|\|..\|.\|__\|\|\|\|\|\|\|
		____UGUUU______UUGGCGC__AUGAAAA
(miRNA)	3'	___C__________________UA_______	5'

UTR3

8mer

482-502

0.0173537767418741

Position on chromosome:

3:170110688-170110708

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	ACUCAUUA___UAC___AAAU________	3'
		________ACA___ACC____UUACUUUU
		________\|\|\|___\|\|\|____\|\|\|\|\|\|\|\|
		________UGU___UGG____AAUGAAAA
(miRNA)	3'	_______C___UUU___CGCU________	5'

UTR3

7mer

482-507

0.00723188323643886

Position on chromosome:

3:170110688-170110713

Conserved species:

panTro2,rn4,oryCun2

Binding area:

(Transcript)	5'	UA___UAC___AAAUUUACUU_______G	3'
		__ACA___ACC__________UUACUUU_
		__\|\|\|___\|\|\|__________\|\|\|\|\|\|\|_
		__UGU___UGG__________AAUGAAA_
(miRNA)	3'	_C___UUU___CGCU_____________A	5'

UTR3

6mer

704-717

0.00370346130798205

Position on chromosome:

3:170110910-170110923

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	GUUAGAUUUUUUUUU____A__A_________	3'
		_______________AAGC_GC____ACUUUU
		_______________\|\|.\|_\|\|____\|\|\|\|\|\|
		_______________UUUG_CG____UGAAAA
(miRNA)	3'	______________U____G__CUAA______	5'

UTR3

6mer

723-749

0.00339984059371851

Position on chromosome:

3:170110929-170110955

Conserved species:

panTro2,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3

Binding area:

(Transcript)	5'	AA______UG__AUAAUUUC___________	3'
		__AUAAAA__UG________UGA__ACUUUU
		__\|.\|\|\|\|__.\|________.\|\|__\|\|\|\|\|\|
		__UGUUUU__GC________GCU__UGAAAA
(miRNA)	3'	_C______UG_____________AA______	5'

UTR3

6mer

1145-1165

0.00529600138907617

Position on chromosome:

3:170111351-170111371

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,loxAfr3,monDom5

Binding area:

(Transcript)	5'	UCAGGAGG_____CAUCUU______________	3'
		________GACAA______CUGC____ACUUUU
		________\|\|\|\|\|______\|.\|\|____\|\|\|\|\|\|
		________CUGUU______GGCG____UGAAAA
(miRNA)	3'	_____________UUU_______CUAA______	5'

UTR3

6mer

3523-3542

0.00308064184011944

Position on chromosome:

3:170113729-170113748

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	GUAUAGGGU__UU____AUUUCC_______	3'
		_________AC__AAGC_______ACUUUU
		_________\|\|__\|\|.\|_______\|\|\|\|\|\|
		_________UG__UUUG_______UGAAAA
(miRNA)	3'	________C__UU____GCGCUAA______	5'

UTR3

9mer

4001-4022

0.0139652338628715

Position on chromosome:

3:170114207-170114228

Conserved species:

panTro2

Binding area:

(Transcript)	5'	AGCCAAC____U____UUAA_________	3'
		_______AUAG_AGUC____AUUACUUUU
		_______\|.\|._\|..\|____\|\|\|\|\|\|\|\|\|
		_______UGUU_UUGG____UAAUGAAAA
(miRNA)	3'	______C____U____CGC__________	5'

UTR3

6mer

4380-4404

0.00903840469266246

Position on chromosome:

3:170114586-170114610

Conserved species:

panTro2,rn4,mm9,oryCun2,bosTau4,canFam2

Binding area:

(Transcript)	5'	UGUG__U____U___AAAUAAAA______	3'
		____GA_CAAA_ACU________ACUUUU
		____\|\|_\|\|\|\|_\|\|.________\|\|\|\|\|\|
		____CU_GUUU_UGG________UGAAAA
(miRNA)	3'	___________U___CGCUAA________	5'

ENSG00000121989 (ACVR2A)

hsa-miR-548h-5p

0.993606123738911

Gene details
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miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

214-236

0.00732069360392981

Position on chromosome:

2:148685058-148685080

Conserved species:

panTro2,rheMac2,bosTau4,canFam2,loxAfr3

Binding area:

(Transcript)	5'	AACCUU_____CU__AUAAA__A_______	3'
		______GCAAA__CU_____GA__ACUUUU
		______.\|\|\|\|__\|._____\|\|__\|\|\|\|\|\|
		______UGUUU__GG_____CU__UGAAAA
(miRNA)	3'	_____C_____UU__CG_____AA______	5'

UTR3

6mer

368-396

0.0122639283550979

Position on chromosome:

2:148685212-148685240

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	_____U___UUUUUUAAAUCAAAA______	3'
		_CUGC_AUU_______________ACUUUU
		_\|.\|\|_\|\|\|_______________\|\|\|\|\|\|
		_GGCG_UAA_______________UGAAAA
(miRNA)	3'	U____C________________________	5'

UTR3

8mer

550-568

0.0290317805241598

Position on chromosome:

2:148685394-148685412

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,echTel1,monDom5

Binding area:

(Transcript)	5'	CAGUAAAGA___UU_____AA_C________A	3'
		_________GGC_____CC__G_AUUACUUU_
		_________\|.\|_____\|\|__\|_\|\|\|\|\|\|\|\|_
		_________CUG_____GG__C_UAAUGAAA_
(miRNA)	3'	____________UUUUU__CG__________A	5'

UTR3

6mer

2296-2309

0.00367269707845731

Position on chromosome:

2:148687140-148687153

Conserved species:

panTro2,rheMac2,canFam2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	UGAGAACUAUUAUUA_______A_____________	3'
		_______________AUAGAAA________ACUUUU
		_______________\|.\|.\|\|\|________\|\|\|\|\|\|
		_______________UGUUUUU________UGAAAA
(miRNA)	3'	______________C_______GGCGCUAA______	5'

UTR3

7mer

3142-3148

0.0122904671269654

Position on chromosome:

2:148687986-148687992

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,galGal3

Binding area:

(Transcript)	5'	AUACUUUCCAGUUUCUCUUUUA_______	3'
		______________________UACUUUU
		______________________\|\|\|\|\|\|\|
		______________________AUGAAAA
(miRNA)	3'	_____________________A_______	5'

UTR3

9mer

3143-3164

0.0285977850462807

Position on chromosome:

2:148687987-148688008

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3

Binding area:

(Transcript)	5'	CUUUUAU__UUUU____AAA__________	3'
		_______AC_____UUG___GAUUACUUUU
		_______\|\|_____..\|___\|\|\|\|\|\|\|\|\|\|
		_______UG_____GGC___CUAAUGAAAA
(miRNA)	3'	______C__UUUUU___G____________	5'

ENSG00000006451 (RALA)

hsa-miR-548h-5p

0.993584294118076

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

68-91

0.0653228084772455

Position on chromosome:

7:39745913-39745936

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,echTel1,monDom5

Binding area:

(Transcript)	5'	UGAA___UUAAUU_____AA________A	3'
		____GGC______GACUG__AUUACUUU_
		____\|.\|______.\|\|.\|__\|\|\|\|\|\|\|\|_
		____CUG______UUGGC__UAAUGAAA_
(miRNA)	3'	_______UUU________GC________A	5'

UTR3

7mer

135-161

0.0213622130130323

Position on chromosome:

7:39745980-39746006

Conserved species:

panTro2

Binding area:

(Transcript)	5'	G_____CAA___AAGUCAAAU_______A	3'
		_AACUG___UGA_________UUACUUU_
		_\|\|\|.\|___.\|\|_________\|\|\|\|\|\|\|_
		_UUGGC___GCU_________AAUGAAA_
(miRNA)	3'	U