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| | | Ensembl Gene Id | miRNA name | miTG score | Also Predicted | | | | | | | | 1 | ENSG00000136206 (SPDYE1) | hsa-miR-548h-5p | 0.999806175078526 |   | |  | | | | Gene details  | | loading... | | miRNA details  | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 7mer | 559-576 | 0.0181456737833468 | 1 | |  | | | | | | | | Position on chromosome: | 7:44048780-44048797 | Conserved species: | panTro2 | Binding area: | (Transcript) | 5' | UCAAAUAGUUU_________UG________ | 3' | | | ___________GGAAAUUGU___UACUUUU | | | | ___________..|||..|.___||||||| | | | | ___________UUUUUGGCG___AUGAAAA | | (miRNA) | 3' | __________G_________CUA_______ | 5' |
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| | | | | | | | | UTR3 | 8mer | 1008-1025 | 0.0432603684769062 | 1 | |  | | | | | | | | Position on chromosome: | 7:44049229-44049246 | Conserved species: | panTro2 | Binding area: | (Transcript) | 5' | UUAUUUAUUU___UG_UAUU________A | 3' | | | __________AAA__U____AUUACUUU_ | | | | __________|||__.____||||||||_ | | | | __________UUU__G____UAAUGAAA_ | | (miRNA) | 3' | _________U___UG_CGC_________A | 5' |
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| | | | | | | | | UTR3 | 7mer | 1375-1395 | 0.0684043617174815 | 1 | |  | | | | | | | | Position on chromosome: | 7:44049596-44049616 | Conserved species: | panTro2 | Binding area: | (Transcript) | 5' | UUGAUUU____UGU_____AU________A | 3' | | | _______GGCA____UUGU__GUUACUUU_ | | | | _______|.||____..|.__.|||||||_ | | | | _______CUGU____GGCG__UAAUGAAA_ | | (miRNA) | 3' | ___________UUUU____C_________A | 5' |
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| | | | | | | | | UTR3 | 6mer | 1477-1492 | 0.0206093647045539 | 1 | |  | | | | | | | | Position on chromosome: | 7:44049698-44049713 | Conserved species: | panTro2 | Binding area: | (Transcript) | 5' | UUGGGGAAACGUA_____________________ | 3' | | | _____________AUAAAAA___UGA__ACUUUU | | | | _____________|.|||||___.||__|||||| | | | | _____________UGUUUUU___GCU__UGAAAA | | (miRNA) | 3' | ____________C_______GGC___AA______ | 5' |
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| | | | | 2 | ENSG00000213366 (GSTM2) | hsa-miR-548h-5p | 0.999546347209658 |   | |  | | | | Gene details  | | loading... | | miRNA details  | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 9mer | 141-162 | 0.0554912225700324 | 1 | |  | | | | | | | | Position on chromosome: | 1:110251340-110251361 | Conserved species: | panTro2 | Binding area: | (Transcript) | 5' | CAUUUAU___UU___CAAAUU_________ | 3' | | | _______CAG___CC______AUUACUUUU | | | | _______||.___||______||||||||| | | | | _______GUU___GG______UAAUGAAAA | | (miRNA) | 3' | ______U___UUU__CGC____________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 164-188 | 0.0583689902889572 | 1 | |  | | | | | | | | Position on chromosome: | 1:110251363-110251387 | Conserved species: | panTro2 | Binding area: | (Transcript) | 5' | UUU___UUUCUUA___CUGUC_______A | 3' | | | ___ACA_______CGC_____UUACUUU_ | | | | ___|||_______|||_____|||||||_ | | | | ___UGU_______GCG_____AAUGAAA_ | | (miRNA) | 3' | __C___UUUUG_____CU__________A | 5' |
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| | | | | | | | | UTR3 | 7mer | 744-768 | 0.0226567913174927 | 1 | |  | | | | | | | | Position on chromosome: | 1:110251943-110251967 | Conserved species: | panTro2 | Binding area: | (Transcript) | 5' | CAUA___CCUU___A____GUUC_______ | 3' | | | ____GAC____AUC_G_GA____UACUUUU | | | | ____|||____|.|_|_||____||||||| | | | | ____CUG____UGG_C_CU____AUGAAAA | | (miRNA) | 3' | _______UUUU_____G__A__________ | 5' |
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| | | | | 3 | ENSG00000198963 (RORB) | hsa-miR-548h-5p | 0.998316933420771 |   | |  | | | | Gene details  | | loading... | | miRNA details  | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 6mer | 311-331 | 0.00533057888867673 | 7 | |  | | | | | | | | Position on chromosome: | 9:77300846-77300866 | Conserved species: | panTro2,rheMac2,oryCun2,canFam2,dasNov2,loxAfr3,echTel1 | Binding area: | (Transcript) | 5' | GAUAUAU_______AAGA___________A | 3' | | | _______ACAAGAA____GCGG_UACUUU_ | | | | _______||||.||____|||._||||||_ | | | | _______UGUUUUU____CGCU_AUGAAA_ | | (miRNA) | 3' | ______C_______GG______A______A | 5' |
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| | | | | | | | | UTR3 | 9mer | 318-345 | 0.0183305070762118 | 8 | |  | | | | | | | | Position on chromosome: | 9:77300853-77300880 | Conserved species: | panTro2,rheMac2,rn4,oryCun2,bosTau4,canFam2,loxAfr3,echTel1 | Binding area: | (Transcript) | 5' | A______G_UACUUUACA___________ | 3' | | | _AAGAGC_G_________UGAUUACUUUU | | | | _||.|.|_|_________.|||||||||| | | | | _UUUUUG_C_________GCUAAUGAAAA | | (miRNA) | 3' | G______G_____________________ | 5' |
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| | | | | | | | | UTR3 | 6mer | 851-868 | 0.00333612940079523 | 5 | |  | | | | | | | | Position on chromosome: | 9:77301386-77301403 | Conserved species: | panTro2,rheMac2,oryCun2,canFam2,loxAfr3 | Binding area: | (Transcript) | 5' | CAGAUAACAUU_____GU__AA__________ | 3' | | | ___________GCAAG__CC__G___ACUUUU | | | | ___________.|||.__||__|___|||||| | | | | ___________UGUUU__GG__C___UGAAAA | | (miRNA) | 3' | __________C_____UU__CG_UAA______ | 5' |
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| | | | | | | | | UTR3 | 6mer | 910-923 | 0.00214456601962404 | 1 | |  | | | | | | | | Position on chromosome: | 9:77301445-77301458 | Conserved species: | panTro2 | Binding area: | (Transcript) | 5' | UUUUCACCAGAACAC_____________________ | 3' | | | _______________AUAAAAAC_______ACUUUU | | | | _______________|.||||||_______|||||| | | | | _______________UGUUUUUG_______UGAAAA | | (miRNA) | 3' | ______________C________GCGCUAA______ | 5' |
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| | | | | | | | | UTR3 | 6mer | 1351-1377 | 0.00217773423302315 | 2 | |  | | | | | | | | Position on chromosome: | 9:77301886-77301912 | Conserved species: | panTro2,bosTau4 | Binding area: | (Transcript) | 5' | AC__UA_A___AUUUUUUUAGCA______ | 3' | | | __CC__G_AUU____________ACUUUU | | | | __||__|_|||____________|||||| | | | | __GG__C_UAA____________UGAAAA | | (miRNA) | 3' | _U__CG_______________________ | 5' |
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| | | | | | | | | UTR3 | 6mer | 4351-4356 | 0.00398473045539923 | 8 | |  | | | | | | | | Position on chromosome: | 9:77304886-77304891 | Conserved species: | panTro2,rheMac2,rn4,mm9,canFam2,dasNov2,loxAfr3,echTel1 | Binding area: | (Transcript) | 5' | CCUGACUCUUUUUUUUUCUAUAA______ | 3' | | | _______________________ACUUUU | | | | _______________________|||||| | | | | _______________________UGAAAA | | (miRNA) | 3' | ______________________A______ | 5' |
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| | | | | | | | | UTR3 | 6mer | 5249-5273 | 0.00179299676436444 | 2 | |  | | | | | | | | Position on chromosome: | 9:77305784-77305808 | Conserved species: | panTro2,canFam2 | Binding area: | (Transcript) | 5' | GCCA___GG________UCUUGCC______ | 3' | | | ____GGG__CUG_GAUU_______ACUUUU | | | | ____...__|.|_||||_______|||||| | | | | ____UUU__GGC_CUAA_______UGAAAA | | (miRNA) | 3' | ___G___UU___G_________________ | 5' |
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| | | | | | | | | UTR3 | 6mer | 5459-5486 | 0.0042251754579672 | 9 | |  | | | | | | | | Position on chromosome: | 9:77305994-77306021 | Conserved species: | panTro2,rheMac2,rn4,mm9,bosTau4,canFam2,dasNov2,loxAfr3,monDom5 | Binding area: | (Transcript) | 5' | A___GG_GG___UCUGUU__UGC______ | 3' | | | _GAU__G__UUG______UG___ACUUUU | | | | _||.__.__..|______.|___|||||| | | | | _CUG__U__GGC______GC___UGAAAA | | (miRNA) | 3' | ____UU_UU___________UAA______ | 5' |
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| | | | | | | | | UTR3 | 9mer | 5926-5942 | 0.0160416993168568 | 12 | |  | | | | | | | | Position on chromosome: | 9:77306461-77306477 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3 | Binding area: | (Transcript) | 5' | AAAAUAUUUUUU__________A_________ | 3' | | | ____________CAAA___UGU_AUUACUUUU | | | | ____________||||___.|._||||||||| | | | | ____________GUUU___GCG_UAAUGAAAA | | (miRNA) | 3' | ___________U____UUG___C_________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 7052-7072 | 0.00871364236916806 | 3 | |  | | | | | | | | Position on chromosome: | 9:77307587-77307607 | Conserved species: | panTro2,rheMac2,canFam2 | Binding area: | (Transcript) | 5' | ACUCUAAA______AAUAAUUC_______ | 3' | | | ________AAGAAU________UACUUUU | | | | ________||.||.________||||||| | | | | ________UUUUUG________AUGAAAA | | (miRNA) | 3' | _______G______GCGCUA_________ | 5' |
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| | | | | | | | | UTR3 | 8mer | 7360-7383 | 0.0489915468673736 | 11 | |  | | | | | | | | Position on chromosome: | 9:77307895-77307918 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,echTel1,monDom5,galGal3 | Binding area: | (Transcript) | 5' | CAAU______AGA__UUUAU________A | 3' | | | ____UAAAAA___GU_____AUUACUUU_ | | | | ____.|||||___|._____||||||||_ | | | | ____GUUUUU___CG_____UAAUGAAA_ | | (miRNA) | 3' | ___U______GG___C____________A | 5' |
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| | | | | 4 | ENSG00000145012 (LPP) | hsa-miR-548h-5p | 0.998171215184053 |   | |  | | | | Gene details  | | loading... | | miRNA details  | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 6mer | 291-307 | 0.00982980885711522 | 8 | |  | | | | | | | | Position on chromosome: | 3:188592559-188592575 | Conserved species: | panTro2,rheMac2,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1 | Binding area: | (Transcript) | 5' | CUUUUAAUCCCU_UG_U__UCUC______ | 3' | | | ____________A__U_UG____ACUUUU | | | | ____________|__._.|____|||||| | | | | ____________U__G_GC____UGAAAA | | (miRNA) | 3' | ___________U_UG_C__UAA_______ | 5' |
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| | | | | | | | | UTR3 | 7mer | 1062-1083 | 0.00927044859620987 | 6 | |  | | | | | | | | Position on chromosome: | 3:188593330-188593351 | Conserved species: | panTro2,oryCun2,canFam2,dasNov2,loxAfr3,echTel1 | Binding area: | (Transcript) | 5' | AACUGU____UU____UU___U_______C | 3' | | | ______GCAG___UUG__UGG_UUACUUU_ | | | | ______.||.___..|__.|._|||||||_ | | | | ______UGUU___GGC__GCU_AAUGAAA_ | | (miRNA) | 3' | _____C____UUU________________A | 5' |
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| | | | | | | | | UTR3 | 6mer | 1275-1295 | 0.00205993556976779 | 1 | |  | | | | | | | | Position on chromosome: | 3:188593543-188593563 | Conserved species: | panTro2 | Binding area: | (Transcript) | 5' | CUCUGCCU______UUU___CAA______ | 3' | | | ________AGAAUC___AUU___ACUUUU | | | | ________|.||.|___|||___|||||| | | | | ________UUUUGG___UAA___UGAAAA | | (miRNA) | 3' | _______U______CGC____________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 1447-1472 | 0.00420855552180979 | 6 | |  | | | | | | | | Position on chromosome: | 3:188593715-188593740 | Conserved species: | panTro2,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3 | Binding area: | (Transcript) | 5' | CUU____UCU__CACAA_UAUA_______ | 3' | | | ___CAAA___CC_____G____UACUUUU | | | | ___||||___||_____|____||||||| | | | | ___GUUU___GG_____C____AUGAAAA | | (miRNA) | 3' | __U____UU___CG____UA_________ | 5' |
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| | | | | | | | | UTR3 | 8mer | 2752-2771 | 0.0164289743386954 | 1 | |  | | | | | | | | Position on chromosome: | 3:188595020-188595039 | Conserved species: | panTro2 | Binding area: | (Transcript) | 5' | AACAGAGA__A__________________A | 3' | | | ________GA_AAAGAUUGU_AUUACUUU_ | | | | ________||_|||.|..|._||||||||_ | | | | ________CU_UUUUUGGCG_UAAUGAAA_ | | (miRNA) | 3' | __________G_________C________A | 5' |
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| | | | | | | | | UTR3 | 9mer | 3404-3430 | 0.00618164637496173 | 1 | |  | | | | | | | | Position on chromosome: | 3:188595672-188595698 | Conserved species: | panTro2 | Binding area: | (Transcript) | 5' | GA____CUUCU___AUCAAA_________ | 3' | | | __GCAA_____CUG______AUUACUUUU | | | | __.|||_____|.|______||||||||| | | | | __UGUU_____GGC______UAAUGAAAA | | (miRNA) | 3' | _C____UUU_____GC_____________ | 5' |
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| | | | | | | | | UTR3 | 6mer | 4315-4331 | 0.00135207885929615 | 1 | |  | | | | | | | | Position on chromosome: | 3:188596583-188596599 | Conserved species: | panTro2 | Binding area: | (Transcript) | 5' | AGAAAAGAAAGA__G_______A___________ | 3' | | | ____________GA_AGAAGUC______ACUUUU | | | | ____________||_|.||..|______|||||| | | | | ____________CU_UUUUUGG______UGAAAA | | (miRNA) | 3' | ______________G_______CGCUAA______ | 5' |
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| | | | | | | | | UTR3 | 6mer | 4644-4668 | 0.00152772548893371 | 3 | |  | | | | | | | | Position on chromosome: | 3:188596912-188596936 | Conserved species: | panTro2,rheMac2,dasNov2 | Binding area: | (Transcript) | 5' | ACUU______UAA_UA__AUGAA______ | 3' | | | ____GACAGA___C__GA_____ACUUUU | | | | ____||||.|___|__||_____|||||| | | | | ____CUGUUU___G__CU_____UGAAAA | | (miRNA) | 3' | __________UUG_CG__AA_________ | 5' |
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| | | | | | | | | UTR3 | 6mer | 4822-4829 | 0.00165644596574441 | 2 | |  | | | | | | | | Position on chromosome: | 3:188597090-188597097 | Conserved species: | panTro2,rheMac2 | Binding area: | (Transcript) | 5' | CUCCUCUUCUUAUUUUCUUU_____________C | 3' | | | ____________________CC_____UACUUU_ | | | | ____________________||_____||||||_ | | | | ____________________GG_____AUGAAA_ | | (miRNA) | 3' | ___________________U__CGCUA______A | 5' |
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| | | | | | | | | UTR3 | 8mer | 7126-7143 | 0.00511865770508526 | 2 | |  | | | | | | | | Position on chromosome: | 3:188599394-188599411 | Conserved species: | panTro2,rheMac2 | Binding area: | (Transcript) | 5' | CCAUGUCUACA_____UU_______________ | 3' | | | ___________GACAG___CUG___UUACUUUU | | | | ___________||||.___|.|___|||||||| | | | | ___________CUGUU___GGC___AAUGAAAA | | (miRNA) | 3' | ________________UUU___GCU________ | 5' |
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| | | | | | | | | UTR3 | 6mer | 7324-7350 | 0.00214099222686777 | 1 | |  | | | | | | | | Position on chromosome: | 3:188599592-188599618 | Conserved species: | panTro2 | Binding area: | (Transcript) | 5' | A___UU___ACUUUAUA___UC______A | 3' | | | _AUA__AAC________GGU__UACUUU_ | | | | _|.|__|||________|.|__||||||_ | | | | _UGU__UUG________CUA__AUGAAA_ | | (miRNA) | 3' | C___UU___GCG________________A | 5' |
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| | | | | | | | | UTR3 | 7mer | 8414-8441 | 0.00361308959319996 | 1 | |  | | | | | | | | Position on chromosome: | 3:188600682-188600709 | Conserved species: | panTro2 | Binding area: | (Transcript) | 5' | C___C_____A__UAAUUUUUUUUG_______ | 3' | | | _GCG____CC_GC____________UACUUUU | | | | _.|.____||_||____________||||||| | | | | _UGU____GG_CG____________AUGAAAA | | (miRNA) | 3' | C___UUUU_____CUA________________ | 5' |
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| | | | | | | | | UTR3 | 9mer | 8733-8749 | 0.00944953497123028 | 4 | |  | | | | | | | | Position on chromosome: | 3:188601001-188601017 | Conserved species: | panTro2,rheMac2,rn4,mm9 | Binding area: | (Transcript) | 5' | UGUUUUGUUUUG______________________ | 3' | | | ____________GGCA____UUGC_AUUACUUUU | | | | ____________|.||____..||_||||||||| | | | | ____________CUGU____GGCG_UAAUGAAAA | | (miRNA) | 3' | ________________UUUU____C_________ | 5' |
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| | | | | | | | | UTR3 | 6mer | 8827-8842 | 0.00146881151836799 | 5 | |  | | | | | | | | Position on chromosome: | 3:188601095-188601110 | Conserved species: | panTro2,rheMac2,bosTau4,loxAfr3,monDom5 | Binding area: | (Transcript) | 5' | UGAGUUUUUUUG____U___UG______C | 3' | | | ____________UUGC_GGU__UACUUU_ | | | | ____________..||_|.|__||||||_ | | | | ____________GGCG_CUA__AUGAAA_ | | (miRNA) | 3' | ___________U________________A | 5' |
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| | | | | | | | | UTR3 | 6mer | 10638-10658 | 0.0016815211703374 | 2 | |  | | | | | | | | Position on chromosome: | 3:188602906-188602926 | Conserved species: | panTro2,rheMac2 | Binding area: | (Transcript) | 5' | UGUACCUU_____UG___UUUCC______ | 3' | | | ________UAGGG__UGC_____ACUUUU | | | | ________.|...__.||_____|||||| | | | | ________GUUUU__GCG_____UGAAAA | | (miRNA) | 3' | _______U_____UG___CUAA_______ | 5' |
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| | | | | | | | | UTR3 | 6mer | 11317-11337 | 0.00201110928609713 | 1 | |  | | | | | | | | Position on chromosome: | 3:188603585-188603605 | Conserved species: | panTro2 | Binding area: | (Transcript) | 5' | UCUCCAGC___U__U___UCCUG______ | 3' | | | ________ACC_GU_GUU_____ACUUUU | | | | ________|||_|._.||_____|||||| | | | | ________UGG_CG_UAA_____UGAAAA | | (miRNA) | 3' | _______U______C______________ | 5' |
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| | | | | | | | | UTR3 | 6mer | 13642-13657 | 0.00196186852897174 | 2 | |  | | | | | | | | Position on chromosome: | 3:188605910-188605925 | Conserved species: | panTro2,rheMac2 | Binding area: | (Transcript) | 5' | GCAUGUUUUCUGU____U_________________ | 3' | | | _____________AUAA_AAACC______ACUUUU | | | | _____________|.||_|||||______|||||| | | | | _____________UGUU_UUUGG______UGAAAA | | (miRNA) | 3' | ____________C__________CGCUAA______ | 5' |
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| | | | | | | | | UTR3 | 8mer | 14104-14124 | 0.0105400112330417 | 10 | |  | | | | | | | | Position on chromosome: | 3:188606372-188606392 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1 | Binding area: | (Transcript) | 5' | UAAAUAUA___UCUAUU________________ | 3' | | | ________GGC______AACU____UUACUUUU | | | | ________|.|______|||.____|||||||| | | | | ________CUG______UUGG____AAUGAAAA | | (miRNA) | 3' | ___________UUU_______CGCU________ | 5' |
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| | | | | | | | | UTR3 | 8mer | 14681-14702 | 0.0110490633200133 | 7 | |  | | | | | | | | Position on chromosome: | 3:188606949-188606970 | Conserved species: | panTro2,rheMac2,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3 | Binding area: | (Transcript) | 5' | CCUUGC____U___UUAGA___________G | 3' | | | ______CAGA__CC_____GC_AUUACUUU_ | | | | ______||.|__||_____||_||||||||_ | | | | ______GUUU__GG_____CG_UAAUGAAA_ | | (miRNA) | 3' | _____U____UU_________C________A | 5' |
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| | | | | | | | | UTR3 | 7mer | 15322-15341 | 0.00356853720828827 | 2 | |  | | | | | | | | Position on chromosome: | 3:188607590-188607609 | Conserved species: | panTro2,rheMac2 | Binding area: | (Transcript) | 5' | UGACUCUUU________G_____________ | 3' | | | _________GGCAAAAG__GUGA_UACUUUU | | | | _________|.|||||.__|.||_||||||| | | | | _________CUGUUUUU__CGCU_AUGAAAA | | (miRNA) | 3' | _________________GG____A_______ | 5' |
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| | | | | | | | | UTR3 | 6mer | 16136-16153 | 0.00859099730268596 | 4 | |  | | | | | | | | Position on chromosome: | 3:188608404-188608421 | Conserved species: | panTro2,rheMac2,oryCun2,echTel1 | Binding area: | (Transcript) | 5' | UUUUCUGUAA_________AAC______A | 3' | | | __________AAGAGUUGC___UACUUU_ | | | | __________||.|...||___||||||_ | | | | __________UUUUUGGCG___AUGAAA_ | | (miRNA) | 3' | _________G_________CUA______A | 5' |
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| | | | | 5 | ENSG00000213923 (CSNK1E) | hsa-miR-548h-5p | 0.99768475355998 |   | |  | | | | Gene details  | | loading... | | miRNA details  | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 8mer | 139-162 | 0.0661304503145801 | 13 | |  | | | | | | | | Position on chromosome: | 22:38686836-38686859 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2 | Binding area: | (Transcript) | 5' | AUUA______AAA__UUUUU________G | 3' | | | ____AAGAGC___GC_____AUUACUUU_ | | | | ____||.|.|___||_____||||||||_ | | | | ____UUUUUG___CG_____UAAUGAAA_ | | (miRNA) | 3' | ___G______G____C____________A | 5' |
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| | | | | | | | | UTR3 | 7mer | 79-107 | 0.0259899620439176 | 11 | |  | | | | | | | | Position on chromosome: | 22:38686776-38686804 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,monDom5,galGal3 | Binding area: | (Transcript) | 5' | _______UU___GGGGAAUUUUG_______ | 3' | | | _AAGAAC__UGG___________UACUUUU | | | | _||.|||__.|.___________||||||| | | | | _UUUUUG__GCU___________AUGAAAA | | (miRNA) | 3' | G______GC___A_________________ | 5' |
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| | | | | | | | | UTR3 | 6mer | 55-75 | 0.0177264777272993 | 10 | |  | | | | | | | | Position on chromosome: | 22:38686752-38686772 | Conserved species: | rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,monDom5,galGal3,xenTro2 | Binding area: | (Transcript) | 5' | CUUUUUUC_____UAAAUAUUGG______ | 3' | | | ________CUGUG__________ACUUUU | | | | ________|.|.|__________|||||| | | | | ________GGCGC__________UGAAAA | | (miRNA) | 3' | _______U_____UAA_____________ | 5' |
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| | | | | 6 | ENSG00000163848 (ZNF148) | hsa-miR-548h-5p | 0.997106743761309 |   | |  | | | | Gene details  | | loading... | | miRNA details  | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 8mer | 6137-6154 | 0.0448415073726192 | 9 | |  | | | | | | | | Position on chromosome: | 3:124950542-124950559 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1 | Binding area: | (Transcript) | 5' | CUCCACUAUU________UA_________A | 3' | | | __________UAAAAGCC___AUUACUUU_ | | | | __________.||||.||___||||||||_ | | | | __________GUUUUUGG___UAAUGAAA_ | | (miRNA) | 3' | _________U________CGC________A | 5' |
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| | | | | | | | | UTR3 | 6mer | 6110-6128 | 0.00608835381384276 | 9 | |  | | | | | | | | Position on chromosome: | 3:124950515-124950533 | Conserved species: | panTro2,rheMac2,rn4,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1 | Binding area: | (Transcript) | 5' | UUAAAAAUAU___U_____UUCA__________ | 3' | | | __________GCA___ACU____GA__ACUUUU | | | | __________.||___||.____||__|||||| | | | | __________UGU___UGG____CU__UGAAAA | | (miRNA) | 3' | _________C___UUU___CG____AA______ | 5' |
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| | | | | | | | | UTR3 | 7mer | 5885-5904 | 0.0156278864460637 | 7 | |  | | | | | | | | Position on chromosome: | 3:124950290-124950309 | Conserved species: | panTro2,rheMac2,oryCun2,bosTau4,canFam2,dasNov2,echTel1 | Binding area: | (Transcript) | 5' | GUUUUAAA__UU_______AUU_______A | 3' | | | ________GC___AAUUGU___UUACUUU_ | | | | ________.|___||..|.___|||||||_ | | | | ________UG___UUGGCG___AAUGAAA_ | | (miRNA) | 3' | _______C__UUU______CU________A | 5' |
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| | | | | | | | | UTR3 | 8mer | 5595-5619 | 0.0142659991062283 | 8 | |  | | | | | | | | Position on chromosome: | 3:124950000-124950024 | Conserved species: | panTro2,rheMac2,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1 | Binding area: | (Transcript) | 5' | AAUU___UAUUUU___U___G________ | 3' | | | ____GCA______AUC_UGA_UUACUUUU | | | | ____.||______|.|_.||_|||||||| | | | | ____UGU______UGG_GCU_AAUGAAAA | | (miRNA) | 3' | ___C___UUU______C____________ | 5' |
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| | | | | | | | | UTR3 | 6mer | 5358-5363 | 0.00445630628109353 | 8 | |  | | | | | | | | Position on chromosome: | 3:124949763-124949768 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3 | Binding area: | (Transcript) | 5' | UUUAUGUAUAUAUACACACACAC______ | 3' | | | _______________________ACUUUU | | | | _______________________|||||| | | | | _______________________UGAAAA | | (miRNA) | 3' | ______________________A______ | 5' |
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| | | | | | | | | UTR3 | 6mer | 5273-5292 | 0.00139129413760975 | 5 | |  | | | | | | | | Position on chromosome: | 3:124949678-124949697 | Conserved species: | panTro2,rheMac2,oryCun2,bosTau4,canFam2 | Binding area: | (Transcript) | 5' | UUAGUUAUU___UCU______UACA______ | 3' | | | _________GAC_____UUGU____ACUUUU | | | | _________|||_____..|.____|||||| | | | | _________CUG_____GGCG____UGAAAA | | (miRNA) | 3' | ____________UUUUU____CUAA______ | 5' |
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| | | | | | | | | UTR3 | 6mer | 4423-4440 | 0.00355436252288311 | 9 | |  | | | | | | | | Position on chromosome: | 3:124948828-124948845 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3 | Binding area: | (Transcript) | 5' | UCUUUAAAUCU___U____G__AG________ | 3' | | | ___________ACA__AAU_GC____ACUUUU | | | | ___________|||__||._||____|||||| | | | | ___________UGU__UUG_CG____UGAAAA | | (miRNA) | 3' | __________C___UU___G__CUAA______ | 5' |
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| | | | | | | | | UTR3 | 6mer | 4072-4100 | 0.00290049716095574 | 5 | |  | | | | | | | | Position on chromosome: | 3:124948477-124948505 | Conserved species: | panTro2,rheMac2,oryCun2,dasNov2,loxAfr3 | Binding area: | (Transcript) | 5' | ______A___U___ACACCCUUAA______ | 3' | | | _AAAAC_UGC_GGU__________ACUUUU | | | | _|||||_.||_|.|__________|||||| | | | | _UUUUG_GCG_CUA__________UGAAAA | | (miRNA) | 3' | U_____________A_______________ | 5' |
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| | | | | | | | | UTR3 | 6mer | 3172-3188 | 0.00304977590090392 | 8 | |  | | | | | | | | Position on chromosome: | 3:124947577-124947593 | Conserved species: | panTro2,rheMac2,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,monDom5 | Binding area: | (Transcript) | 5' | UAAACGUGUCUU__________AA__________ | 3' | | | ____________GACA___AUC__GG__ACUUUU | | | | ____________||||___|.|__|.__|||||| | | | | ____________CUGU___UGG__CU__UGAAAA | | (miRNA) | 3' | ________________UUU___CG__AA______ | 5' |
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| | | | | | | | | UTR3 | 6mer | 2210-2220 | 0.00607034008861978 | 11 | |  | | | | | | | | Position on chromosome: | 3:124946615-124946625 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,monDom5,galGal3 | Binding area: | (Transcript) | 5' | GGAUUUGCUAGUCCACUU____C_________ | 3' | | | __________________CUGU____ACUUUU | | | | __________________|.|.____|||||| | | | | __________________GGCG____UGAAAA | | (miRNA) | 3' | _________________U____CUAA______ | 5' |
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| | | | | | | | | UTR3 | 6mer | 1279-1305 | 0.00401763224260003 | 6 | |  | | | | | | | | Position on chromosome: | 3:124945684-124945710 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4 | Binding area: | (Transcript) | 5' | AU_______AUUUUUAAAUAUAA______ | 3' | | | __UUGUGAU______________ACUUUU | | | | __..|.|||______________|||||| | | | | __GGCGCUA______________UGAAAA | | (miRNA) | 3' | _U_______A___________________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 895-916 | 0.0100055852514482 | 2 | |  | | | | | | | | Position on chromosome: | 3:124945300-124945321 | Conserved species: | panTro2,rheMac2 | Binding area: | (Transcript) | 5' | ACUAAA________UUU__CU_______A | 3' | | | ______GGAAGUUG___UG__UUACUUU_ | | | | ______..||...|___.|__|||||||_ | | | | ______UUUUUGGC___GC__AAUGAAA_ | | (miRNA) | 3' | _____G_____________U________A | 5' |
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| | | | | | | | | UTR3 | 9mer | 2025-2047 | 0.0359258017301244 | 0 | |  | | | | | | | | Position on chromosome: | 3:125007046-125007068 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | CUAUAA___U_____AG_AA_________ | 3' | | | ______GCG_AAAGC__G__AUUACUUUU | | | | ______.|._|||.|__|__||||||||| | | | | ______UGU_UUUUG__C__UAAUGAAAA | | (miRNA) | 3' | _____C_________G__GC_________ | 5' |
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| | | | | 7 | ENSG00000137770 (CTDSPL2) | hsa-miR-548h-5p | 0.996831681088821 |   | |  | | | | Gene details  | | loading... | | miRNA details  | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 8mer+mismatch | 58-78 | 0.0305634360119459 | 15 | |  | | | | | | | | Position on chromosome: | 15:44816431-44816451 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,tetNig2,fr2,danRer6 | Binding area: | (Transcript) | 5' | ACUAA_________AU___C______GUU | 3' | | | _____GACAAAAAC__UGC_AUUACU___ | | | | _____|||||||||__.||_||||||___ | | | | _____CUGUUUUUG__GCG_UAAUGA___ | | (miRNA) | 3' | ___________________C______A__ | 5' |
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| | | | | | | | | UTR3 | 6mer | 333-354 | 0.00683002297411875 | 7 | |  | | | | | | | | Position on chromosome: | 15:44816706-44816727 | Conserved species: | panTro2,rheMac2,oryCun2,bosTau4,canFam2,dasNov2,monDom5 | Binding area: | (Transcript) | 5' | GAUAAUA________GAAAA___________ | 3' | | | _______ACAGAGAU_____UGG__ACUUUU | | | | _______|||.|.|._____.|.__|||||| | | | | _______UGUUUUUG_____GCU__UGAAAA | | (miRNA) | 3' | ______C________GC______AA______ | 5' |
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| | | | | | | | | UTR3 | 6mer | 373-399 | 0.00643489461691333 | 10 | |  | | | | | | | | Position on chromosome: | 15:44816746-44816772 | Conserved species: | panTro2,rheMac2,rn4,oryCun2,bosTau4,canFam2,dasNov2,echTel1,monDom5,galGal3 | Binding area: | (Transcript) | 5' | GU__UCU__G_______UGUAGCC______ | 3' | | | __GC___AA_UG_GGUU_______ACUUUU | | | | __.|___||_.|_|.||_______|||||| | | | | __UG___UU_GC_CUAA_______UGAAAA | | (miRNA) | 3' | _C__UUU__G__G_________________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 390-409 | 0.0186387299858685 | 10 | |  | | | | | | | | Position on chromosome: | 15:44816763-44816782 | Conserved species: | rheMac2,rn4,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3 | Binding area: | (Transcript) | 5' | GGGUUUGU____ACUUUUCU________A | 3' | | | ________AGCC________GUUACUUU_ | | | | ________|.||________.|||||||_ | | | | ________UUGG________UAAUGAAA_ | | (miRNA) | 3' | _______U____CGC_____________A | 5' |
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| | | | | | | | | UTR3 | 7mer | 636-655 | 0.01086407267451 | 10 | |  | | | | | | | | Position on chromosome: | 15:44817009-44817028 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1 | Binding area: | (Transcript) | 5' | AUAUUUGUU_______AUUCUC_______ | 3' | | | _________UAAAAAU______UACUUUU | | | | _________.|||||.______||||||| | | | | _________GUUUUUG______AUGAAAA | | (miRNA) | 3' | ________U_______GCGCUA_______ | 5' |
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| | | | | | | | | UTR3 | 6mer | 1356-1370 | 0.00408457409584725 | 12 | |  | | | | | | | | Position on chromosome: | 15:44817729-44817743 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3 | Binding area: | (Transcript) | 5' | UGUAAAGGAUGUCA______G____________ | 3' | | | ______________AAGAAC_GC____ACUUUU | | | | ______________||.|||_||____|||||| | | | | ______________UUUUUG_CG____UGAAAA | | (miRNA) | 3' | _____________G______G__CUAA______ | 5' |
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| | | | | | | | | UTR3 | 6mer | 2227-2242 | 0.002430478386042 | 5 | |  | | | | | | | | Position on chromosome: | 15:44818600-44818615 | Conserved species: | panTro2,rheMac2,canFam2,loxAfr3,echTel1 | Binding area: | (Transcript) | 5' | GGGCACUUCAAUA_________A___________ | 3' | | | _____________AUAAAAACC______ACUUUU | | | | _____________|.|||||||______|||||| | | | | _____________UGUUUUUGG______UGAAAA | | (miRNA) | 3' | ____________C_________CGCUAA______ | 5' |
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| | | | | | | | | UTR3 | 6mer | 2751-2773 | 0.00268627034100775 | 8 | |  | | | | | | | | Position on chromosome: | 15:44819124-44819146 | Conserved species: | panTro2,rn4,mm9,oryCun2,bosTau4,dasNov2,loxAfr3,echTel1 | Binding area: | (Transcript) | 5' | CUAUUU__A_____AAAUGUCUG______ | 3' | | | ______CC_GUGGU_________ACUUUU | | | | ______||_|.|.|_________|||||| | | | | ______GG_CGCUA_________UGAAAA | | (miRNA) | 3' | _____U________A______________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 3161-3185 | 0.00380609407622503 | 2 | |  | | | | | | | | Position on chromosome: | 15:44819534-44819558 | Conserved species: | rheMac2,canFam2 | Binding area: | (Transcript) | 5' | AAU___UUUUUC___UA__UC_______C | 3' | | | ___GAC______AUC__GA__UUACUUU_ | | | | ___|||______|.|__||__|||||||_ | | | | ___CUG______UGG__CU__AAUGAAA_ | | (miRNA) | 3' | ______UUUU_____CG___________A | 5' |
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| | | | | | | | | UTR3 | 6mer | 4579-4603 | 0.00779972052048708 | 8 | |  | | | | | | | | Position on chromosome: | 15:44820952-44820976 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3 | Binding area: | (Transcript) | 5' | GUA__AAU____AA___AAUAC______C | 3' | | | ___GA___AAGC__UGA_____UACUUU_ | | | | ___||___||.|__.||_____||||||_ | | | | ___CU___UUUG__GCU_____AUGAAA_ | | (miRNA) | 3' | _____GUU____GC___A__________A | 5' |
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| | | | | | | | | UTR3 | 6mer | 4832-4854 | 0.0122806322276037 | 7 | |  | | | | | | | | Position on chromosome: | 15:44821205-44821227 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2 | Binding area: | (Transcript) | 5' | GGGUUG______GGAUAAAUAAA______ | 3' | | | ______UUGUGG___________ACUUUU | | | | ______..|.|.___________|||||| | | | | ______GGCGCU___________UGAAAA | | (miRNA) | 3' | _____U______AA_______________ | 5' |
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| | | | | | | | | UTR3 | 8mer | 917-938 | 0.0075249401130843 | 0 | |  | | | | | | | | Position on chromosome: | 15:44791960-44791981 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | AUGAGCU_G____UG_A__AC________ | 3' | | | _______A_AAGA__C_GC__UUACUUUU | | | | _______|_||.|__|_||__|||||||| | | | | _______U_UUUU__G_CG__AAUGAAAA | | (miRNA) | 3' | ______C_G____UG____CU________ | 5' |
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| | | | | 8 | ENSG00000154654 (NCAM2) | hsa-miR-548h-5p | 0.996823145172023 |   | |  | | | | Gene details  | | loading... | | miRNA details  | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 7mer | 1610-1631 | 0.00490347103310013 | 1 | |  | | | | | | | | Position on chromosome: | 21:22911889-22911910 | Conserved species: | panTro2 | Binding area: | (Transcript) | 5' | CAGCCAA__AGA_______AAG_________ | 3' | | | _______GG___GAAAACU_____UACUUUU | | | | _______|.___.|||||._____||||||| | | | | _______CU___UUUUUGG_____AUGAAAA | | (miRNA) | 3' | _________G_________CGCUA_______ | 5' |
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| | | | | | | | | UTR3 | 7mer | 3427-3452 | 0.00872410090991318 | 2 | |  | | | | | | | | Position on chromosome: | 21:22913706-22913731 | Conserved species: | panTro2,rheMac2 | Binding area: | (Transcript) | 5' | UA_____CUAU_____AUAAU_______A | 3' | | | __AUAAA____ACUGU_____UUACUUU_ | | | | __|.|||____||.|._____|||||||_ | | | | __UGUUU____UGGCG_____AAUGAAA_ | | (miRNA) | 3' | _C_____U________CU__________A | 5' |
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| | | | | | | | | UTR3 | 8mer+mismatch | 3576-3598 | 0.00139025344276913 | 2 | |  | | | | | | | | Position on chromosome: | 21:22913855-22913877 | Conserved species: | panTro2,rheMac2 | Binding area: | (Transcript) | 5' | UUGUAA_________AA_A___A______ | 3' | | | ______GACAAAGAC__C_GAU_ACUUUU | | | | ______||||||.||__|_|||_|||||| | | | | ______CUGUUUUUG__G_CUA_UGAAAA | | (miRNA) | 3' | _______________GC_____A______ | 5' |
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| | | | | | | | | UTR3 | 8mer | 4413-4433 | 0.00994117525856004 | 2 | |  | | | | | | | | Position on chromosome: | 21:22914692-22914712 | Conserved species: | panTro2,rheMac2 | Binding area: | (Transcript) | 5' | UAUUCUU_G______AGUUU________A | 3' | | | _______A_AAAAAU_____AUUACUUU_ | | | | _______|_|||||._____||||||||_ | | | | _______U_UUUUUG_____UAAUGAAA_ | | (miRNA) | 3' | ______C_G______GCGC_________A | 5' |
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| | | | | | | | | UTR3 | 7mer | 5348-5364 | 0.0191858594977718 | 10 | |  | | | | | | | | Position on chromosome: | 21:22915627-22915643 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,canFam2,dasNov2,loxAfr3,echTel1,galGal3 | Binding area: | (Transcript) | 5' | AUUUGUAUAUUA____U__A_____________ | 3' | | | ____________AUAG_AA____GA_UACUUUU | | | | ____________|.|._||____||_||||||| | | | | ____________UGUU_UU____CU_AUGAAAA | | (miRNA) | 3' | ___________C____U__GGCG__A_______ | 5' |
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| | | | | | | | | UTR3 | 7mer | 5352-5369 | 0.0605170833575426 | 12 | |  | | | | | | | | Position on chromosome: | 21:22915631-22915648 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3 | Binding area: | (Transcript) | 5' | AUAUUAAUAG_______ACUU________A | 3' | | | __________UAAAGAU_____UUACUUU_ | | | | __________.|||.|._____|||||||_ | | | | __________GUUUUUG_____AAUGAAA_ | | (miRNA) | 3' | _________U_______GCGCU_______A | 5' |
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| | | | | 9 | ENSG00000170989 (S1PR1) | hsa-miR-548h-5p | 0.995451805411962 |   | |  | | | | Gene details  | | loading... | | miRNA details  | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 7mer | 485-498 | 0.0213132143451274 | 6 | |  | | | | | | | | Position on chromosome: | 1:101706175-101706188 | Conserved species: | panTro2,rheMac2,rn4,oryCun2,bosTau4,canFam2 | Binding area: | (Transcript) | 5' | AUACCCCUCCUCAA___UCUU_______A | 3' | | | ______________CGU____UUACUUU_ | | | | ______________||.____|||||||_ | | | | ______________GCG____AAUGAAA_ | | (miRNA) | 3' | _____________G___CU_________A | 5' |
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| | | | | | | | | UTR3 | 6mer | 907-928 | 0.00623894490499755 | 8 | |  | | | | | | | | Position on chromosome: | 1:101706597-101706618 | Conserved species: | panTro2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3 | Binding area: | (Transcript) | 5' | CAAAUAU____U______UCUU___C_______ | 3' | | | _______GACA____CUG____UGG__ACUUUU | | | | _______||||____|.|____.|.__|||||| | | | | _______CUGU____GGC____GCU__UGAAAA | | (miRNA) | 3' | ___________UUUU__________AA______ | 5' |
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| | | | | | | | | UTR3 | 7mer | 990-1008 | 0.00761408362496441 | 3 | |  | | | | | | | | Position on chromosome: | 1:101706680-101706698 | Conserved species: | panTro2,loxAfr3,echTel1 | Binding area: | (Transcript) | 5' | UUGUAUUUUG_____UUAAAAG_______ | 3' | | | __________UUGUG_______UACUUUU | | | | __________..|.|_______||||||| | | | | __________GGCGC_______AUGAAAA | | (miRNA) | 3' | _________U_____UA____________ | 5' |
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| | | | | | | | | UTR3 | 8mer | 1122-1136 | 0.0373247994711326 | 9 | |  | | | | | | | | Position on chromosome: | 1:101706812-101706826 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1 | Binding area: | (Transcript) | 5' | CCUCUUGUGCCCU___________________A | 3' | | | _____________UAAAAGC____AUUACUUU_ | | | | _____________.||||.|____||||||||_ | | | | _____________GUUUUUG____UAAUGAAA_ | | (miRNA) | 3' | ____________U_______GCGC________A | 5' |
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| | | | | | | | | UTR3 | 6mer | 1141-1163 | 0.0028315986360269 | 2 | |  | | | | | | | | Position on chromosome: | 1:101706831-101706853 | Conserved species: | panTro2,rheMac2 | Binding area: | (Transcript) | 5' | UUAACU_____GG_A___CAGAA______ | 3' | | | ______GGUAG__A_CGC_____ACUUUU | | | | ______|..|.__|_|||_____|||||| | | | | ______CUGUU__U_GCG_____UGAAAA | | (miRNA) | 3' | ___________UU_G___CUAA_______ | 5' |
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| | | | | | | | | UTR3 | 6mer | 1305-1321 | 0.010011180385905 | 8 | |  | | | | | | | | Position on chromosome: | 1:101706995-101707011 | Conserved species: | panTro2,rheMac2,mm9,oryCun2,canFam2,dasNov2,echTel1,monDom5 | Binding area: | (Transcript) | 5' | GAAUAGUAUUUA_____UUU______________ | 3' | | | ____________AUAGG___CUG_____ACUUUU | | | | ____________|.|..___|.|_____|||||| | | | | ____________UGUUU___GGC_____UGAAAA | | (miRNA) | 3' | ___________C_____UU____GCUAA______ | 5' |
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| | | | | | | | | UTR3 | 6mer | 1336-1355 | 0.0134407803544128 | 11 | |  | | | | | | | | Position on chromosome: | 1:101707026-101707045 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5 | Binding area: | (Transcript) | 5' | UCAUUUUGC___U_____UUAUCA______ | 3' | | | _________ACA__AGCU______ACUUUU | | | | _________|||__|.|.______|||||| | | | | _________UGU__UUGG______UGAAAA | | (miRNA) | 3' | ________C___UU____CGCUAA______ | 5' |
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| | | | | 10 | ENSG00000134057 (CCNB1) | hsa-miR-548h-5p | 0.994427891170518 |   | |  | | | | Gene details  | | loading... | | miRNA details  | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 8mer | 61-85 | 0.0352547976435221 | 5 | |  | | | | | | | | Position on chromosome: | 5:68473520-68473544 | Conserved species: | panTro2,oryCun2,bosTau4,canFam2,loxAfr3 | Binding area: | (Transcript) | 5' | CUGU___UAUU____U__CAU________ | 3' | | | ____ACA____ACUG_UG___UUACUUUU | | | | ____|||____||.|_.|___|||||||| | | | | ____UGU____UGGC_GC___AAUGAAAA | | (miRNA) | 3' | ___C___UUU________U__________ | 5' |
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| | | | | | | | | UTR3 | 8mer | 87-113 | 0.0228939530153038 | 3 | |  | | | | | | | | Position on chromosome: | 5:68473546-68473572 | Conserved species: | panTro2,rheMac2,monDom5 | Binding area: | (Transcript) | 5' | UA______C______CCCCUU________ | 3' | | | __AUAAAG_UUGUGG______UUACUUUU | | | | __|.|||._..|.|.______|||||||| | | | | __UGUUUU_GGCGCU______AAUGAAAA | | (miRNA) | 3' | _C______U____________________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 267-286 | 0.0167333542778622 | 3 | |  | | | | | | | | Position on chromosome: | 5:68473726-68473745 | Conserved species: | panTro2,rheMac2,oryCun2 | Binding area: | (Transcript) | 5' | CUUGUUUU___U_________CUU_______A | 3' | | | ________AUA___ACC_UGG___UUACUUU_ | | | | ________|.|___|||_.|.___|||||||_ | | | | ________UGU___UGG_GCU___AAUGAAA_ | | (miRNA) | 3' | _______C___UUU___C_____________A | 5' |
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| | | | | | | | | UTR3 | 8mer | 454-481 | 0.0205571485374394 | 2 | |  | | | | | | | | Position on chromosome: | 5:68473913-68473940 | Conserved species: | panTro2,rheMac2 | Binding area: | (Transcript) | 5' | G____C_UAAUUCUAAGUUAU________ | 3' | | | _CUGC_A______________UUACUUUU | | | | _|.||_|______________|||||||| | | | | _GGCG_U______________AAUGAAAA | | (miRNA) | 3' | U____C_______________________ | 5' |
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| | | | | 11 | ENSG00000136603 (SKIL) | hsa-miR-548h-5p | 0.994064234341893 |   | |  | | | | Gene details  | | loading... | | miRNA details  | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 7mer | 186-210 | 0.016642743257714 | 7 | |  | | | | | | | | Position on chromosome: | 3:170110392-170110416 | Conserved species: | panTro2,rheMac2,rn4,bosTau4,dasNov2,monDom5,galGal3 | Binding area: | (Transcript) | 5' | AAUG____UG_A__UUUCUUUG_______ | 3' | | | ____AAAA__U_UG________UACUUUU | | | | ____||||__._.|________||||||| | | | | ____UUUU__G_GC________AUGAAAA | | (miRNA) | 3' | ___G____UG_C__UA_____________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 280-304 | 0.0146879841755374 | 6 | |  | | | | | | | | Position on chromosome: | 3:170110486-170110510 | Conserved species: | panTro2,rheMac2,oryCun2,bosTau4,canFam2,loxAfr3 | Binding area: | (Transcript) | 5' | UAAU_____CUUAAC________________ | 3' | | | ____GCAAA______AAUUGUG__UACUUUU | | | | ____.||||______||..|.|__||||||| | | | | ____UGUUU______UUGGCGC__AUGAAAA | | (miRNA) | 3' | ___C__________________UA_______ | 5' |
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| | | | | | | | | UTR3 | 8mer | 482-502 | 0.0173537767418741 | 2 | |  | | | | | | | | Position on chromosome: | 3:170110688-170110708 | Conserved species: | panTro2,rheMac2 | Binding area: | (Transcript) | 5' | ACUCAUUA___UAC___AAAU________ | 3' | | | ________ACA___ACC____UUACUUUU | | | | ________|||___|||____|||||||| | | | | ________UGU___UGG____AAUGAAAA | | (miRNA) | 3' | _______C___UUU___CGCU________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 482-507 | 0.00723188323643886 | 3 | |  | | | | | | | | Position on chromosome: | 3:170110688-170110713 | Conserved species: | panTro2,rn4,oryCun2 | Binding area: | (Transcript) | 5' | UA___UAC___AAAUUUACUU_______G | 3' | | | __ACA___ACC__________UUACUUU_ | | | | __|||___|||__________|||||||_ | | | | __UGU___UGG__________AAUGAAA_ | | (miRNA) | 3' | _C___UUU___CGCU_____________A | 5' |
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| | | | | | | | | UTR3 | 6mer | 704-717 | 0.00370346130798205 | 2 | |  | | | | | | | | Position on chromosome: | 3:170110910-170110923 | Conserved species: | panTro2,rheMac2 | Binding area: | (Transcript) | 5' | GUUAGAUUUUUUUUU____A__A_________ | 3' | | | _______________AAGC_GC____ACUUUU | | | | _______________||.|_||____|||||| | | | | _______________UUUG_CG____UGAAAA | | (miRNA) | 3' | ______________U____G__CUAA______ | 5' |
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| | | | | | | | | UTR3 | 6mer | 723-749 | 0.00339984059371851 | 7 | |  | | | | | | | | Position on chromosome: | 3:170110929-170110955 | Conserved species: | panTro2,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3 | Binding area: | (Transcript) | 5' | AA______UG__AUAAUUUC___________ | 3' | | | __AUAAAA__UG________UGA__ACUUUU | | | | __|.||||__.|________.||__|||||| | | | | __UGUUUU__GC________GCU__UGAAAA | | (miRNA) | 3' | _C______UG_____________AA______ | 5' |
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| | | | | | | | | UTR3 | 6mer | 1145-1165 | 0.00529600138907617 | 8 | |  | | | | | | | | Position on chromosome: | 3:170111351-170111371 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,loxAfr3,monDom5 | Binding area: | (Transcript) | 5' | UCAGGAGG_____CAUCUU______________ | 3' | | | ________GACAA______CUGC____ACUUUU | | | | ________|||||______|.||____|||||| | | | | ________CUGUU______GGCG____UGAAAA | | (miRNA) | 3' | _____________UUU_______CUAA______ | 5' |
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| | | | | | | | | UTR3 | 6mer | 3523-3542 | 0.00308064184011944 | 2 | |  | | | | | | | | Position on chromosome: | 3:170113729-170113748 | Conserved species: | panTro2,rheMac2 | Binding area: | (Transcript) | 5' | GUAUAGGGU__UU____AUUUCC_______ | 3' | | | _________AC__AAGC_______ACUUUU | | | | _________||__||.|_______|||||| | | | | _________UG__UUUG_______UGAAAA | | (miRNA) | 3' | ________C__UU____GCGCUAA______ | 5' |
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| | | | | | | | | UTR3 | 9mer | 4001-4022 | 0.0139652338628715 | 1 | |  | | | | | | | | Position on chromosome: | 3:170114207-170114228 | Conserved species: | panTro2 | Binding area: | (Transcript) | 5' | AGCCAAC____U____UUAA_________ | 3' | | | _______AUAG_AGUC____AUUACUUUU | | | | _______|.|._|..|____||||||||| | | | | _______UGUU_UUGG____UAAUGAAAA | | (miRNA) | 3' | ______C____U____CGC__________ | 5' |
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| | | | | | | | | UTR3 | 6mer | 4380-4404 | 0.00903840469266246 | 6 | |  | | | | | | | | Position on chromosome: | 3:170114586-170114610 | Conserved species: | panTro2,rn4,mm9,oryCun2,bosTau4,canFam2 | Binding area: | (Transcript) | 5' | UGUG__U____U___AAAUAAAA______ | 3' | | | ____GA_CAAA_ACU________ACUUUU | | | | ____||_||||_||.________|||||| | | | | ____CU_GUUU_UGG________UGAAAA | | (miRNA) | 3' | ___________U___CGCUAA________ | 5' |
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| | | | | 12 | ENSG00000121989 (ACVR2A) | hsa-miR-548h-5p | 0.993606123738911 |   | |  | | | | Gene details  | | loading... | | miRNA details  | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 6mer | 214-236 | 0.00732069360392981 | 5 | |  | | | | | | | | Position on chromosome: | 2:148685058-148685080 | Conserved species: | panTro2,rheMac2,bosTau4,canFam2,loxAfr3 | Binding area: | (Transcript) | 5' | AACCUU_____CU__AUAAA__A_______ | 3' | | | ______GCAAA__CU_____GA__ACUUUU | | | | ______.||||__|._____||__|||||| | | | | ______UGUUU__GG_____CU__UGAAAA | | (miRNA) | 3' | _____C_____UU__CG_____AA______ | 5' |
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| | | | | | | | | UTR3 | 6mer | 368-396 | 0.0122639283550979 | 11 | |  | | | | | | | | Position on chromosome: | 2:148685212-148685240 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5 | Binding area: | (Transcript) | 5' | _____U___UUUUUUAAAUCAAAA______ | 3' | | | _CUGC_AUU_______________ACUUUU | | | | _|.||_|||_______________|||||| | | | | _GGCG_UAA_______________UGAAAA | | (miRNA) | 3' | U____C________________________ | 5' |
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| | | | | | | | | UTR3 | 8mer | 550-568 | 0.0290317805241598 | 10 | |  | | | | | | | | Position on chromosome: | 2:148685394-148685412 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,echTel1,monDom5 | Binding area: | (Transcript) | 5' | CAGUAAAGA___UU_____AA_C________A | 3' | | | _________GGC_____CC__G_AUUACUUU_ | | | | _________|.|_____||__|_||||||||_ | | | | _________CUG_____GG__C_UAAUGAAA_ | | (miRNA) | 3' | ____________UUUUU__CG__________A | 5' |
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| | | | | | | | | UTR3 | 6mer | 2296-2309 | 0.00367269707845731 | 5 | |  | | | | | | | | Position on chromosome: | 2:148687140-148687153 | Conserved species: | panTro2,rheMac2,canFam2,loxAfr3,echTel1 | Binding area: | (Transcript) | 5' | UGAGAACUAUUAUUA_______A_____________ | 3' | | | _______________AUAGAAA________ACUUUU | | | | _______________|.|.|||________|||||| | | | | _______________UGUUUUU________UGAAAA | | (miRNA) | 3' | ______________C_______GGCGCUAA______ | 5' |
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| | | | | | | | | UTR3 | 7mer | 3142-3148 | 0.0122904671269654 | 6 | |  | | | | | | | | Position on chromosome: | 2:148687986-148687992 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,galGal3 | Binding area: | (Transcript) | 5' | AUACUUUCCAGUUUCUCUUUUA_______ | 3' | | | ______________________UACUUUU | | | | ______________________||||||| | | | | ______________________AUGAAAA | | (miRNA) | 3' | _____________________A_______ | 5' |
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| | | | | | | | | UTR3 | 9mer | 3143-3164 | 0.0285977850462807 | 8 | |  | | | | | | | | Position on chromosome: | 2:148687987-148688008 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3 | Binding area: | (Transcript) | 5' | CUUUUAU__UUUU____AAA__________ | 3' | | | _______AC_____UUG___GAUUACUUUU | | | | _______||_____..|___|||||||||| | | | | _______UG_____GGC___CUAAUGAAAA | | (miRNA) | 3' | ______C__UUUUU___G____________ | 5' |
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| | | | | 13 | ENSG00000006451 (RALA) | hsa-miR-548h-5p | 0.993584294118076 |   | |  | | | | Gene details  | | loading... | | miRNA details  | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 8mer | 68-91 | 0.0653228084772455 | 10 | |  | | | | | | | | Position on chromosome: | 7:39745913-39745936 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,echTel1,monDom5 | Binding area: | (Transcript) | 5' | UGAA___UUAAUU_____AA________A | 3' | | | ____GGC______GACUG__AUUACUUU_ | | | | ____|.|______.||.|__||||||||_ | | | | ____CUG______UUGGC__UAAUGAAA_ | | (miRNA) | 3' | _______UUU________GC________A | 5' |
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| | | | | | | | | UTR3 | 7mer | 135-161 | 0.0213622130130323 | 1 | |  | | | | | | | | Position on chromosome: | 7:39745980-39746006 | Conserved species: | panTro2 | Binding area: | (Transcript) | 5' | G_____CAA___AAGUCAAAU_______A | 3' | | | _AACUG___UGA_________UUACUUU_ | | | | _|||.|___.||_________|||||||_ | | | | _UUGGC___GCU_________AAUGAAA_ | | (miRNA) | 3' | U |
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