DIANA TOOLS - MicroT-CDS

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Results: 1 targets of miRNAs hsa-miR-548h-5p

found in genes ENSG00000119547

. Threshold is set to 0.

Name:	hsa-miR-548h-5p
Alternative description:	MIMAT0005928
Related names:
miRNA sequence:	aaaaguaaucgcgguuuuuguc
External links:	miRBase
DIANA resources:	microT-CDS
Related diseases:	Acute Disease Acute Lung Injury Breast Neoplasms Carcinoma, Hepatocellular Cell Transformation, Neoplastic Chromosome Deletion Colitis, Ulcerative Colorectal Neoplasms Cri-du-Chat Syndrome Critical Illness Disease Progression Genetic Predisposition to Disease Glioblastoma Hematologic Neoplasms Inflammation Liver Neoplasms Lymphoma, Large B-Cell, Diffuse Melanoma Microsatellite Instability Multiple Sclerosis Neoplasm Metastasis Neoplasms Neoplasms, Glandular and Epithelial Neuroblastoma Ovarian Neoplasms Prostatic Neoplasms Pulmonary Embolism Skin Neoplasms Stomach Neoplasms Wounds and Injuries

Gene ID:	ONECUT2
Expression:	K562,MCF-7,HepG2,HeLa-S3,pancreas,liver,duodenum,gall bladder
External Gene ID:	ENSG00000119547
Description:
Chromosome:	18
DIANA resources:	microT v4 microT-CDS

Ensembl Gene Id

miRNA name

miTG score

Also Predicted

ENSG00000119547 (ONECUT2)

hsa-miR-548h-5p

0.950862136114402

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

9mer

1329-1350

0.0255667994781124

Position on chromosome:

18:55145285-55145306

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,monDom5

Binding area:

(Transcript)	5'	UCUAGCC_____AU_______________	3'
		_______UAAAA__ACUGUGAUUACUUUU
		_______.\|\|\|\|__\|\|.\|.\|\|\|\|\|\|\|\|\|\|
		_______GUUUU__UGGCGCUAAUGAAAA
(miRNA)	3'	______U______________________	5'

UTR3

6mer

1630-1649

0.00411017309661476

Position on chromosome:

18:55145586-55145605

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	UUCUUUACA____CUU__________________	3'
		_________GACA___GAGACUG_____ACUUUU
		_________\|\|\|\|___.\|.\|\|.\|_____\|\|\|\|\|\|
		_________CUGU___UUUUGGC_____UGAAAA
(miRNA)	3'	_______________________GCUAA______	5'

UTR3

6mer

1667-1684

0.00124897258566589

Position on chromosome:

18:55145623-55145640

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,xenTro2

Binding area:

(Transcript)	5'	AUUACUUAGUC______AAA__A_______	3'
		___________GAAACC___GA__ACUUUU
		___________.\|\|\|\|\|___\|\|__\|\|\|\|\|\|
		___________UUUUGG___CU__UGAAAA
(miRNA)	3'	__________U______CG___AA______	5'

UTR3

7mer

2544-2565

0.00525724763448946

Position on chromosome:

18:55146500-55146521

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	UGUAAAA____UU___A__UUC_______	3'
		_______AUAA__GCC_GU___UACUUUU
		_______\|.\|\|__.\|\|_\|.___\|\|\|\|\|\|\|
		_______UGUU__UGG_CG___AUGAAAA
(miRNA)	3'	______C____UU______CUA_______	5'

UTR3

7mer

4301-4320

0.00631119378943373

Position on chromosome:

18:55148257-55148276

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	GCCAUUGA_UG_____ACAAU________A	3'
		________G__GAAAA______UUACUUU_
		________\|__.\|\|\|\|______\|\|\|\|\|\|\|_
		________C__UUUUU______AAUGAAA_
(miRNA)	3'	_________UG_____GGCGCU_______A	5'

UTR3

6mer

4704-4726

0.00147415834795947

Position on chromosome:

18:55148660-55148682

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	GAAUGU__________ACACACAC______	3'
		______AAAUC_UGAU________ACUUUU
		______\|\|\|.\|_.\|\|\|________\|\|\|\|\|\|
		______UUUGG_GCUA________UGAAAA
(miRNA)	3'	_____U_____C____A_____________	5'

UTR3

6mer

4870-4890

0.00129305234676059

Position on chromosome:

18:55148826-55148846

Conserved species:

panTro2,rheMac2,canFam2,dasNov2

Binding area:

(Transcript)	5'	CUGGGUAU__G______UU_CCC_______	3'
		________GG_GGAAAC__C____ACUUUU
		________\|._..\|\|\|\|__\|____\|\|\|\|\|\|
		________CU_UUUUUG__G____UGAAAA
(miRNA)	3'	__________G______GC_CUAA______	5'

UTR3

6mer

5152-5171

0.00194867768711847

Position on chromosome:

18:55149108-55149127

Conserved species:

panTro2,rheMac2,dasNov2

Binding area:

(Transcript)	5'	AGAUUCGUA___GGUU__________________	3'
		_________ACA____AGAGCUG_____ACUUUU
		_________\|\|\|____\|.\|.\|.\|_____\|\|\|\|\|\|
		_________UGU____UUUUGGC_____UGAAAA
(miRNA)	3'	________C______________GCUAA______	5'

UTR3

6mer

7530-7548

0.00312507166169754

Position on chromosome:

18:55151486-55151504

Conserved species:

panTro2,rheMac2,rn4,mm9,bosTau4,canFam2,loxAfr3,monDom5,galGal3,xenTro2

Binding area:

(Transcript)	5'	AACCAAAGAA___U______UCACUG______	3'
		__________GGC____ACC______ACUUUU
		__________\|.\|____\|\|\|______\|\|\|\|\|\|
		__________CUG____UGG______UGAAAA
(miRNA)	3'	_____________UUUU___CGCUAA______	5'

UTR3

6mer

8441-8464

0.00228942762091439

Position on chromosome:

18:55152397-55152420

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UGUU___UUUGAUU___A___G______A	3'
		____GGC_______AUU_UGG_UACUUU_
		____\|.\|_______\|.._.\|._\|\|\|\|\|\|_
		____CUG_______UGG_GCU_AUGAAA_
(miRNA)	3'	_______UUUU______C___A______A	5'

UTR3

6mer

12753-12776

0.00182649014993096

Position on chromosome:

18:55156709-55156732

Conserved species:

panTro2,rheMac2,bosTau4

Binding area:

(Transcript)	5'	AAAA___U_____CAUCAA__CC______A	3'
		____ACA__GGCC______UG__UACUUU_
		____\|\|\|__..\|\|______.\|__\|\|\|\|\|\|_
		____UGU__UUGG______GC__AUGAAA_
(miRNA)	3'	___C___UU____C_______UA______A	5'

UTR3

6mer

14055-14074

0.00467737406818676

Position on chromosome:

18:55158011-55158030

Conserved species:

panTro2,bosTau4

Binding area:

(Transcript)	5'	AAAAUCGUA__G_______UUAA________	3'
		_________GG_AAAAACU______ACUUUU
		_________\|._\|\|\|\|\|\|.______\|\|\|\|\|\|
		_________CU_UUUUUGG______UGAAAA
(miRNA)	3'	___________G_______CGCUAA______	5'