DIANA TOOLS - MicroT-CDS

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Results: 1116 targets for miRNAs hsa-miR-449a

. Threshold is set to 0.7.

Name:	hsa-miR-449a
Alternative description:	MIMAT0001541
Related names:
miRNA sequence:	uggcaguguauuguuagcuggu
External links:	miRBase
DIANA resources:	microT-CDS
Related diseases:	Adenoma Azoospermia Carcinoma Carcinoma, Hepatocellular Cell Transformation, Neoplastic Colorectal Neoplasms Helicobacter Infections Hematologic Neoplasms Influenza in Birds Ischemia Liver Neoplasms Melanoma Multiple Sclerosis Myocardial Infarction Myocardial Ischemia Nasopharyngeal Neoplasms Neoplasms, Glandular and Epithelial Neuroblastoma Ovarian Neoplasms Poultry Diseases Prostatic Neoplasms Recurrence Stomach Neoplasms

Ensembl Gene Id

miRNA name

miTG score

Also Predicted

ENSG00000033170 (FUT8)

hsa-miR-449a

0.999993534894088

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

9mer

283-302

0.206001019508425

Position on chromosome:

14:66209412-66209431

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	AGUAUGUCC___UAA_______________	3'
		_________CCA___GACAA_ACACUGCCA
		_________\|\|\|___.\|\|\|\|_\|\|\|\|\|\|\|\|\|
		_________GGU___UUGUU_UGUGACGGU
(miRNA)	3'	________U___CGA_____A_________	5'

ENSG00000126458 (RRAS)

hsa-miR-449a

0.999992459547366

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

7mer

120-140

0.00794544483850214

Position on chromosome:

19:50138669-50138689

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	ACUUCCUG___UCUU____GC___________	3'
		________GCC____CUGG_____UACUGCCA
		________.\|\|____\|\|.._____.\|\|\|\|\|\|\|
		________UGG____GAUU_____GUGACGGU
(miRNA)	3'	___________UC______GUUAU________	5'

UTR3

6mer

103-123

0.0031568123861525

Position on chromosome:

19:50138652-50138672

Conserved species:

panTro2,dasNov2,loxAfr3

Binding area:

(Transcript)	5'	GGGCUACU________U______CUU______	3'
		________GCCA_CUG___GUGC___CUGCCA
		________.\|\|\|_\|\|.___.\|.\|___\|\|\|\|\|\|
		________UGGU_GAU___UAUG___GACGGU
(miRNA)	3'	____________C___UGU____U________	5'

UTR3

8mer

6-29

0.192384018536345

Position on chromosome:

19:50138555-50138578

Conserved species:

panTro2,rheMac2,rn4,mm9,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	CUCCC____AAA_____AUGU________	3'
		_____CCAG___AAUAA____CACUGCCA
		_____\|\|\|\|___\|\|.\|\|____\|\|\|\|\|\|\|\|
		_____GGUC___UUGUU____GUGACGGU
(miRNA)	3'	____U____GA______AU__________	5'

ENSG00000162702 (ZNF281)

hsa-miR-449a

0.9999592305385

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

9mer

2012-2026

0.182244993858826

Position on chromosome:

1:200376080-200376094

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2,tetNig2,danRer6

Binding area:

(Transcript)	5'	AAUUUUGUUUUAUU____G____________	3'
		______________UUGA_A__ACACUGCCA
		______________.\|.\|_\|__\|\|\|\|\|\|\|\|\|
		______________GAUU_U__UGUGACGGU
(miRNA)	3'	_____________C____G_UA_________	5'

UTR3

7mer

1046-1056

0.0100020287317271

Position on chromosome:

1:200377192-200377202

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	AAAGAAAAGAAGAUAUUU______________________	3'
		__________________ACCA___________ACUGCCA
		__________________\|\|\|\|___________\|\|\|\|\|\|\|
		__________________UGGU___________UGACGGU
(miRNA)	3'	______________________CGAUUGUUAUG_______	5'

ENSG00000119283 (TRIM67)

hsa-miR-449a

0.999947063351045

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

292-318

0.00499104011775056

Position on chromosome:

1:231351479-231351505

Conserved species:

panTro2,rheMac2,oryCun2,canFam2

Binding area:

(Transcript)	5'	UU_G____U___UGUCU____UUC______	3'
		__C_GGCU__CA_____AUGU___CUGCCA
		__\|_.\|\|\|__\|\|_____\|\|..___\|\|\|\|\|\|
		__G_UCGA__GU_____UAUG___GACGGU
(miRNA)	3'	_U_G____UU___________U________	5'

UTR3

6mer

1353-1381

0.00116416424964342

Position on chromosome:

1:231352540-231352568

Conserved species:

panTro2

Binding area:

(Transcript)	5'	_____CAU_____GGGUU_UG_GC______	3'
		_AGCU___GGCAG_____U__A__CUGCCA
		_\|\|\|\|___..\|\|._____\|__\|__\|\|\|\|\|\|
		_UCGA___UUGUU_____A__U__GACGGU
(miRNA)	3'	G__________________UG_________	5'

UTR3

6mer

1627-1648

0.000745270423304187

Position on chromosome:

1:231352814-231352835

Conserved species:

panTro2

Binding area:

(Transcript)	5'	CACCGC___U___UU_UGAGUA______U	3'
		______GCC_GCU__C______ACUGCC_
		______.\|\|_\|\|\|__\|______\|\|\|\|\|\|_
		______UGG_CGA__G______UGACGG_
(miRNA)	3'	_________U___UU_UUAUG_______U	5'

UTR3

8mer

2471-2497

0.00186989094164472

Position on chromosome:

1:231353658-231353684

Conserved species:

panTro2

Binding area:

(Transcript)	5'	CA__________UCCCUCCUCCC________	3'
		__GCCAG__GAC___________CACUGCCA
		__.\|\|\|\|__.\|\|___________\|\|\|\|\|\|\|\|
		__UGGUC__UUG___________GUGACGGU
(miRNA)	3'	_______GA___UUAU_______________	5'

UTR3

6mer

3803-3828

0.000987882712268827

Position on chromosome:

1:231354990-231355015

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	CAU________U_UC___CCAUCAU______	3'
		___CC__CUGG_C__UAC_______CUGCCA
		___\|\|__\|\|.._\|__\|\|\|_______\|\|\|\|\|\|
		___GG__GAUU_G__AUG_______GACGGU
(miRNA)	3'	__U__UC______UU___U____________	5'

UTR3

6mer

3994-4016

0.000963065507281047

Position on chromosome:

1:231355181-231355203

Conserved species:

panTro2

Binding area:

(Transcript)	5'	UAGAAA___U__AUG______A_________	3'
		______GCC_GU___UGACAA___GCUGCCA
		______.\|\|_\|.___\|.\|\|\|\|___.\|\|\|\|\|\|
		______UGG_CG___AUUGUU___UGACGGU
(miRNA)	3'	_________U___________AUG_______	5'

UTR3

9mer

6100-6114

0.160912906553456

Position on chromosome:

1:231357287-231357301

Conserved species:

panTro2,rheMac2,mm9,oryCun2,bosTau4,canFam2,dasNov2,echTel1,monDom5

Binding area:

(Transcript)	5'	AUUUGAAAUAAAUU__UUUG___________	3'
		______________CU______ACACUGCCA
		______________\|\|______\|\|\|\|\|\|\|\|\|
		______________GA______UGUGACGGU
(miRNA)	3'	_____________C__UUGUUA_________	5'

ENSG00000143630 (HCN3)

hsa-miR-449a

0.99991711791199

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

7mer

113-141

0.00961806790278506

Position on chromosome:

1:155258368-155258396

Conserved species:

rheMac2

Binding area:

(Transcript)	5'	___CUGU__G____UUCCGC_________	3'
		ACC____GC_GACA______AUACUGCCA
		\|\|\|____\|\|_.\|\|\|______\|.\|\|\|\|\|\|\|
		UGG____CG_UUGU______UGUGACGGU
(miRNA)	3'	___U_____A____UA_____________	5'

UTR3

8mer

251-277

0.0890746495891078

Position on chromosome:

1:155258506-155258532

Conserved species:

rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	AU____GGC____U_____UCUC________	3'
		__GCCA___GCUG___AUG____CACUGCCA
		__.\|\|\|___\|\|\|.___\|\|.____\|\|\|\|\|\|\|\|
		__UGGU___CGAU___UAU____GUGACGGU
(miRNA)	3'	_____________UGU_______________	5'

UTR3

6mer

314-334

0.00281350856765551

Position on chromosome:

1:155258569-155258589

Conserved species:

rheMac2,rn4,mm9,oryCun2,bosTau4,loxAfr3

Binding area:

(Transcript)	5'	AGGAUAUU__CUU_____UG_U__________	3'
		________CC___GGCUA__G___C_CUGCCA
		________\|\|___.\|\|\|\|__.___\|_\|\|\|\|\|\|
		________GG___UCGAU__U___G_GACGGU
(miRNA)	3'	_______U__________UG_UAU_U______	5'

UTR3

8mer

366-392

0.0118817085269235

Position on chromosome:

1:155258621-155258647

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	UU___A_________GUACUUGC________	3'
		__ACU_AGC__ACAA________CACUGCCA
		__\|\|._\|\|\|__\|\|\|\|________\|\|\|\|\|\|\|\|
		__UGG_UCG__UGUU________GUGACGGU
(miRNA)	3'	_________AU____AU______________	5'

UTR3

8mer

383-401

0.0313919920681491

Position on chromosome:

1:155258638-155258656

Conserved species:

rheMac2,oryCun2,canFam2,monDom5

Binding area:

(Transcript)	5'	ACAAGUACUU________C__U__________	3'
		__________GCCA_CUG_CA___CACUGCCA
		__________.\|\|\|_\|\|._\|\|___\|\|\|\|\|\|\|\|
		__________UGGU_GAU_GU___GUGACGGU
(miRNA)	3'	______________C___U__UAU________	5'

UTR3

6mer

406-430

0.00239775658333954

Position on chromosome:

1:155258661-155258685

Conserved species:

oryCun2

Binding area:

(Transcript)	5'	AGUA_____AUGU_UC___UUCC______	3'
		____ACUAG____C__UGU____CUGCCA
		____\|\|.\|\|____\|__\|..____\|\|\|\|\|\|
		____UGGUC____G__AUG____GACGGU
(miRNA)	3'	_________GAUU_UU___U_________	5'

UTR3

8mer

476-496

0.00564173950226988

Position on chromosome:

1:155258731-155258751

Conserved species:

rheMac2,bosTau4

Binding area:

(Transcript)	5'	UGUUCCUG____A____CAG_________	3'
		________UAGC_UAGC___GCACUGCCA
		________.\|\|\|_\|\|.\|___.\|\|\|\|\|\|\|\|
		________GUCG_AUUG___UGUGACGGU
(miRNA)	3'	_______G_________UUA_________	5'

UTR3

8mer

560-574

0.0114869384079761

Position on chromosome:

1:155258815-155258829

Conserved species:

rheMac2,rn4,oryCun2,monDom5

Binding area:

(Transcript)	5'	GGGUAUCCACUUUU___C__________________	3'
		______________ACC_GCU_______CACUGCCA
		______________\|\|\|_\|\|\|_______\|\|\|\|\|\|\|\|
		______________UGG_CGA_______GUGACGGU
(miRNA)	3'	_________________U___UUGUUAU________	5'

ENSG00000119042 (SATB2)

hsa-miR-449a

0.99991607004099

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

1984-2010

0.032027969272946

Position on chromosome:

2:200136207-200136233

Conserved species:

panTro2

Binding area:

(Transcript)	5'	UG__U_______AAUAAACG_________	3'
		__UA_UUAACAA________ACACUGCCG
		__.\|_.\|\|\|\|\|\|________\|\|\|\|\|\|\|\|.
		__GU_GAUUGUU________UGUGACGGU
(miRNA)	3'	_G__C_______A________________	5'

UTR3

8mer

382-408

0.132073034944687

Position on chromosome:

2:200134605-200134631

Conserved species:

panTro2,rheMac2,mm9,oryCun2,bosTau4,canFam2,dasNov2,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	UU___UU___UUUUU____UU________	3'
		__GCC__UUA_____UAAU__CACUGCCA
		__.\|\|__.\|\|_____.\|\|\|__\|\|\|\|\|\|\|\|
		__UGG__GAU_____GUUA__GUGACGGU
(miRNA)	3'	_____UC___U________U_________	5'

ENSG00000011677 (GABRA3)

hsa-miR-449a

0.999888738108162

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

9mer

1766-1790

0.144661955909926

Position on chromosome:

X:151336472-151336496

Conserved species:

panTro2,rheMac2,mm9,bosTau4,canFam2,dasNov2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	UAUA___CCAUCAA___________________	3'
		____ACC_______AGC___CAA_ACACUGCCA
		____\|\|\|_______\|\|\|___\|\|\|_\|\|\|\|\|\|\|\|\|
		____UGG_______UCG___GUU_UGUGACGGU
(miRNA)	3'	_________________AUU___A_________	5'

UTR3

6mer

1737-1760

0.00528370736584622

Position on chromosome:

X:151336443-151336466

Conserved species:

panTro2,rheMac2,bosTau4,canFam2,echTel1

Binding area:

(Transcript)	5'	UUUGU_______CU__UCU__GU______	3'
		_____CCAGUUG__CA___UA__CUGCCA
		_____\|\|\|\|.\|.__\|\|___\|\|__\|\|\|\|\|\|
		_____GGUCGAU__GU___AU__GACGGU
(miRNA)	3'	____U_______U___U____GU______	5'

UTR3

6mer

1370-1382

0.00164542397564458

Position on chromosome:

X:151336076-151336088

Conserved species:

panTro2

Binding area:

(Transcript)	5'	GGCCAAAAUAAAUAGA______________________	3'
		________________ACUAGCU_________CUGCCA
		________________\|\|.\|\|\|\|_________\|\|\|\|\|\|
		________________UGGUCGA_________GACGGU
(miRNA)	3'	_______________________UUGUUAUGU______	5'

UTR3

6mer

1339-1362

0.00148868915145719

Position on chromosome:

X:151336045-151336068

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	CUGGC____AGA____U_____C______	3'
		_____ACCA___UGGC_GGUGC_CUGCCA
		_____\|\|\|\|___\|..\|_..\|.\|_\|\|\|\|\|\|
		_____UGGU___AUUG_UUAUG_GACGGU
(miRNA)	3'	_________CG___________U______	5'

UTR3

7mer

1266-1291

0.00351565415517475

Position on chromosome:

X:151335972-151335997

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	CU____AAAAUCUUCUUCCCC_______U	3'
		__CCAG_______________CACUGCC_
		__\|\|\|\|_______________\|\|\|\|\|\|\|_
		__GGUC_______________GUGACGG_
(miRNA)	3'	_U____GAUUGUUAU_____________U	5'

UTR3

6mer

1077-1103

0.00289769912565433

Position on chromosome:

X:151335783-151335809

Conserved species:

panTro2,rheMac2,mm9,oryCun2

Binding area:

(Transcript)	5'	GG__A__________AAAGUCACCUCC______	3'
		__AG_____GAUACA____________CUGCCA
		__\|\|_____.\|\|\|\|\|____________\|\|\|\|\|\|
		__UC_____UUAUGU____________GACGGU
(miRNA)	3'	_G__GAUUG________________________	5'

ENSG00000118707 (TGIF2)

hsa-miR-449a

0.999860492239268

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

77-96

0.137834811793569

Position on chromosome:

20:35219912-35219931

Conserved species:

panTro2,rheMac2,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	UACAGAGGG__UU___UG____________	3'
		_________UU__CUA__GAU_CACUGCCA
		_________..__\|\|\|__.\|\|_\|\|\|\|\|\|\|\|
		_________GG__GAU__UUA_GUGACGGU
(miRNA)	3'	________U__UC___UG___U________	5'

UTR3

6mer

312-338

0.00454586824034827

Position on chromosome:

20:35220147-35220173

Conserved species:

panTro2,rheMac2,mm9

Binding area:

(Transcript)	5'	UU__UG______GCU___GAAA_______	3'
		__CC__GGCUGG___CAG____GCUGCCA
		__\|\|__.\|\|\|..___\|\|.____.\|\|\|\|\|\|
		__GG__UCGAUU___GUU____UGACGGU
(miRNA)	3'	_U________________AUG________	5'

UTR3

8mer

588-614

0.00953565856234342

Position on chromosome:

20:35220423-35220449

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	GG_G______G__GGACCCAC________	3'
		__U_AGCUGG_AA________CACUGCCA
		__._\|\|\|\|.._\|\|________\|\|\|\|\|\|\|\|
		__G_UCGAUU_UU________GUGACGGU
(miRNA)	3'	_U_G______G__AU______________	5'

UTR3

6mer

1189-1210

0.00147279492965563

Position on chromosome:

20:35221024-35221045

Conserved species:

panTro2,rheMac2,loxAfr3

Binding area:

(Transcript)	5'	UGGUGU___CU________AGGA______U	3'
		______CCA__GCUG_CGG____ACUGCC_
		______\|\|\|__\|\|\|._\|..____\|\|\|\|\|\|_
		______GGU__CGAU_GUU____UGACGG_
(miRNA)	3'	_____U_________U___AUG_______U	5'

UTR3

6mer

2141-2161

0.00240598669803737

Position on chromosome:

20:35221976-35221996

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	GGCUUCAU___G______UG__________	3'
		________CCA_GUUAAC___AUGCUGCCA
		________\|\|\|_\|.\|\|\|\|___\|..\|\|\|\|\|\|
		________GGU_CGAUUG___UGUGACGGU
(miRNA)	3'	_______U__________UUA_________	5'

ENSG00000067798 (NAV3)

hsa-miR-449a

0.999840749398577

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

64-80

0.10858773951552

Position on chromosome:

12:78604362-78604378

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2

Binding area:

(Transcript)	5'	AGAAAGGUAUUU________AC___________	3'
		____________UCA_CUAA_____CACUGCCA
		____________.\|\|_\|\|\|\|_____\|\|\|\|\|\|\|\|
		____________GGU_GAUU_____GUGACGGU
(miRNA)	3'	___________U___C____GUUAU________	5'

UTR3

7mer

582-603

0.0173790363134339

Position on chromosome:

12:78604880-78604901

Conserved species:

panTro2,rheMac2,oryCun2,canFam2,dasNov2,loxAfr3,monDom5,galGal3,xenTro2

Binding area:

(Transcript)	5'	GAGAAGU____AU_____UCUA________	3'
		_______GCCA__UUAAU_____ACUGCCA
		_______.\|\|\|__.\|\|\|._____\|\|\|\|\|\|\|
		_______UGGU__GAUUG_____UGACGGU
(miRNA)	3'	___________C______UUAUG_______	5'

UTR3

7mer

802-823

0.0225650998267013

Position on chromosome:

12:78605100-78605121

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,monDom5,galGal3,xenTro2

Binding area:

(Transcript)	5'	ACAUUU__UAUGGU____U_U__________U	3'
		______CC______GCUG_C____CACUGCC_
		______\|\|______\|\|\|._\|____\|\|\|\|\|\|\|_
		______GG______CGAU_G____GUGACGG_
(miRNA)	3'	_____U__U_________U_UUAU_______U	5'

UTR3

6mer

2096-2116

0.0070074511034158

Position on chromosome:

12:78606394-78606414

Conserved species:

panTro2,rheMac2,rn4,oryCun2,canFam2,dasNov2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	CUAAGAAA__________CUUU_C______	3'
		________AUU_GCUAAU____C_CUGCCA
		________\|.._\|\|\|\|\|.____\|_\|\|\|\|\|\|
		________UGG_CGAUUG____G_GACGGU
(miRNA)	3'	___________U______UUAU_U______	5'

UTR3

7mer

3159-3183

0.0038860680200017

Position on chromosome:

12:78513136-78513160

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	CCCC____GCA___GAA___CG_______	3'
		____UCAG___UUG___GAU__ACUGCCA
		____.\|\|\|___.\|.___.\|\|__\|\|\|\|\|\|\|
		____GGUC___GAU___UUA__UGACGGU
(miRNA)	3'	___U__________UG____UG_______	5'

ENSG00000125355 (TMEM255A)

hsa-miR-449a

0.99981777753617

Gene details
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miRNA details
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UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

2098-2117

0.00414514779111857

Position on chromosome:

X:119394603-119394622

Conserved species:

panTro2,rheMac2,bosTau4,canFam2,echTel1

Binding area:

(Transcript)	5'	UAUGCAUAA____UU______GC______	3'
		_________AGUU__ACAAUG__CUGCCA
		_________\|\|.\|__\|\|\|\|\|.__\|\|\|\|\|\|
		_________UCGA__UGUUAU__GACGGU
(miRNA)	3'	________G____U_______GU______	5'

UTR3

6mer

1687-1709

0.00310303149673827

Position on chromosome:

X:119394192-119394214

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	UUGUG__UGGAU_____AAA__G______C	3'
		_____UC_____GUUGA____A_ACUGCC_
		_____.\|_____\|.\|.\|____\|_\|\|\|\|\|\|_
		_____GG_____CGAUU____U_UGACGG_
(miRNA)	3'	____U__U_________GUUA_G______U	5'

UTR3

8mer

62-75

0.150143978424803

Position on chromosome:

X:119392567-119392580

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	GAUGUUGCUUAAAAU___UAU___________	3'
		_______________CUG______CACUGCCA
		_______________\|\|.______\|\|\|\|\|\|\|\|
		_______________GAU______GUGACGGU
(miRNA)	3'	______________C___UGUUAU________	5'

UTR3

7mer

329-355

0.011906096994726

Position on chromosome:

X:119410766-119410792

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	UG___U___CCUG____UCAU________	3'
		__GCC_GUU____GGCA____CACUGCCG
		__.\|\|_\|.\|____..\|\|____\|\|\|\|\|\|\|.
		__UGG_CGA____UUGU____GUGACGGU
(miRNA)	3'	_____U___________UAU_________	5'

ENSG00000260259 (RP11-368I7.4)

hsa-miR-449a

0.99975282089818

Gene details
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miRNA details
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UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

26-49

0.149572151118827

Position on chromosome:

16:89749054-89749077

Conserved species:

panTro2

Binding area:

(Transcript)	5'	AACCC____________GCACC________	3'
		_____AUCAGC_AGCAA_____CACUGCCA
		_____\|.\|\|\|\|_\|.\|\|\|_____\|\|\|\|\|\|\|\|
		_____UGGUCG_UUGUU_____GUGACGGU
(miRNA)	3'	___________A_____AU___________	5'

UTR3

7mer

137-164

0.00681435041459488

Position on chromosome:

16:89751789-89751816

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	_______CGGU___GCCCAAAC_______C	3'
		_CCAGCU____CGG________CACUGCC_
		_\|\|\|\|\|\|____\|..________\|\|\|\|\|\|\|_
		_GGUCGA____GUU________GUGACGG_
(miRNA)	3'	U______UU_____AU_____________U	5'

ENSG00000143457 (GOLPH3L)

hsa-miR-449a

0.999750811358034

Gene details
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miRNA details
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UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

442-460

0.00440810826492727

Position on chromosome:

1:150619143-150619161

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	AAUUAUUUAU___U__CU_UC___U______	3'
		__________UCA_UU__C____C_CUGCCA
		__________.\|\|_.\|__\|____\|_\|\|\|\|\|\|
		__________GGU_GA__G____G_GACGGU
(miRNA)	3'	_________U___C__UU_UUAU_U______	5'

UTR3

8mer

70-91

0.141904257475776

Position on chromosome:

1:150618771-150618792

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,dasNov2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	AGUUUGA___U__________UU________	3'
		_______AUC_GC__AUAAUG__CACUGCCA
		_______\|.\|_\|\|__\|.\|\|\|.__\|\|\|\|\|\|\|\|
		_______UGG_CG__UGUUAU__GUGACGGU
(miRNA)	3'	__________U__AU________________	5'

ENSG00000105245 (NUMBL)

hsa-miR-449a

0.999742349210293

Gene details
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miRNA details
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UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

7mer

544-571

0.0150589478104855

Position on chromosome:

19:41173140-41173167

Conserved species:

panTro2,rheMac2,rn4,mm9,echTel1

Binding area:

(Transcript)	5'	G__U______G__AACCAUUU________	3'
		_CC_GGCUAA_GG________CACUGCCG
		_\|\|_.\|\|\|\|\|_..________\|\|\|\|\|\|\|.
		_GG_UCGAUU_UU________GUGACGGU
(miRNA)	3'	U_________G__AU______________	5'

UTR3

8mer

282-303

0.13070747449514

Position on chromosome:

19:41172878-41172899

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	CCUCUGC___CAC_______UU_________	3'
		_______CCA___GCU_GCG___CACUGCCA
		_______\|\|\|___\|\|\|_.\|.___\|\|\|\|\|\|\|\|
		_______GGU___CGA_UGU___GUGACGGU
(miRNA)	3'	______U_________U___UAU________	5'

ENSG00000112242 (E2F3)

hsa-miR-449a

0.999655266251693

Gene details
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miRNA details
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UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

663-680

0.0029785544338766

Position on chromosome:

6:20491325-20491342

Conserved species:

panTro2,rheMac2,oryCun2,loxAfr3,monDom5,galGal3

Binding area:

(Transcript)	5'	AGAUACAGAAG_________G___U________	3'
		___________ACUAGU__A_AGU___CUGCCA
		___________\|\|.\|\|.__\|_\|.\|___\|\|\|\|\|\|
		___________UGGUCG__U_UUA___GACGGU
(miRNA)	3'	_________________AU_G___UGU______	5'

UTR3

6mer

801-827

0.00415004732521058

Position on chromosome:

6:20491463-20491489

Conserved species:

panTro2,rheMac2,rn4,mm9,bosTau4,canFam2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	UU____A__UU____UUUUUUA_______	3'
		__CUAG_CU__UAAU_______GCUGCCA
		__\|.\|\|_\|\|__.\|\|\|_______.\|\|\|\|\|\|
		__GGUC_GA__GUUA_______UGACGGU
(miRNA)	3'	_U_______UU____UG____________	5'

UTR3

9mer

2711-2736

0.133877574124959

Position on chromosome:

6:20493373-20493398

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,monDom5,galGal3

Binding area:

(Transcript)	5'	AAA____AAU____UUGUAA_________	3'
		___UAGC___UAAU______ACACUGCCA
		___.\|\|\|___.\|\|\|______\|\|\|\|\|\|\|\|\|
		___GUCG___GUUA______UGUGACGGU
(miRNA)	3'	__G____AUU___________________	5'

ENSG00000204619 (PPP1R11)

hsa-miR-449a

0.999639226747287

Gene details
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miRNA details
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UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

242-270

0.0859966128702785

Position on chromosome:

6:30037326-30037354

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,monDom5

Binding area:

(Transcript)	5'	______GUCUUCCUUUU__UCU________	3'
		_CCAGU___________GU___CACUGCCA
		_\|\|\|\|.___________.\|___\|\|\|\|\|\|\|\|
		_GGUCG___________UA___GUGACGGU
(miRNA)	3'	U_____AUUGU________U__________	5'

UTR3

6mer

262-277

0.00291225939169319

Position on chromosome:

6:30037346-30037361

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4

Binding area:

(Transcript)	5'	UUCCUUUUGUUC_______C____________U	3'
		____________UCA_CUG_CAA___ACUGCC_
		____________.\|\|_\|\|._\|\|\|___\|\|\|\|\|\|_
		____________GGU_GAU_GUU___UGACGG_
(miRNA)	3'	___________U___C___U___AUG______U	5'

UTR3

8mer

354-369

0.0513537630407029

Position on chromosome:

6:30037438-30037453

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,monDom5

Binding area:

(Transcript)	5'	GUUUUCAACAGUC______UU_____________	3'
		_____________CCAGCU_______CACUGCCA
		_____________\|\|\|\|\|\|_______\|\|\|\|\|\|\|\|
		_____________GGUCGA_______GUGACGGU
(miRNA)	3'	____________U______UUGUUAU________	5'

ENSG00000138795 (LEF1)

hsa-miR-449a

0.999638387041207

Gene details
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miRNA details
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UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

1016-1036

0.14022462494496

Position on chromosome:

4:108969717-108969737

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	ACGCUGAU___UAAA_______________	3'
		________CCA____GACAAU_CACUGCCA
		________\|\|\|____.\|\|\|\|\|_\|\|\|\|\|\|\|\|
		________GGU____UUGUUA_GUGACGGU
(miRNA)	3'	_______U___CGA_______U________	5'

ENSG00000067715 (SYT1)

hsa-miR-449a

0.999605736388975

Gene details
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miRNA details
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UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

7mer

175-193

0.0280794949718756

Position on chromosome:

12:79843080-79843098

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,galGal3

Binding area:

(Transcript)	5'	CCCCUAAGU__UU_AU___UAC_______C	3'
		_________CC__C___CA___CACUGCC_
		_________\|\|__\|___\|\|___\|\|\|\|\|\|\|_
		_________GG__G___GU___GUGACGG_
(miRNA)	3'	________U__UC_AUU__UAU_______U	5'

UTR3

6mer

1441-1468

0.00296564793387006

Position on chromosome:

12:79844346-79844373

Conserved species:

panTro2,rheMac2,bosTau4,canFam2,dasNov2,monDom5,galGal3,xenTro2,tetNig2

Binding area:

(Transcript)	5'	G_______CUGUGU____C___G_______	3'
		_ACU_GCU______AACA_UGU_ACUGCCG
		_\|\|._\|\|\|______\|\|\|\|_\|.._\|\|\|\|\|\|.
		_UGG_CGA______UUGU_AUG_UGACGGU
(miRNA)	3'	____U_____________U___________	5'

UTR3

7mer

1520-1544

0.0104935854672007

Position on chromosome:

12:79844425-79844449

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,monDom5,galGal3,xenTro2

Binding area:

(Transcript)	5'	UCCG____GAUAUUG________________	3'
		____UAGU_______UAACA__AUACUGCCA
		____.\|\|._______\|\|\|\|\|__\|.\|\|\|\|\|\|\|
		____GUCG_______AUUGU__UGUGACGGU
(miRNA)	3'	___G________________UA_________	5'

UTR3

7mer

1541-1564

0.0050089822506846

Position on chromosome:

12:79844446-79844469

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	UACU____UUCC__UC__C_________C	3'
		____GCCA____CU__UA_UGCACUGCC_
		____.\|\|\|____\|\|__.\|_\|.\|\|\|\|\|\|\|_
		____UGGU____GA__GU_AUGUGACGG_
(miRNA)	3'	________C_____UU__U_________U	5'

UTR3

9mer

2427-2441

0.0781855260374635

Position on chromosome:

12:79845332-79845346

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,monDom5,galGal3

Binding area:

(Transcript)	5'	CACUAAUGCAUUCU__U______________	3'
		______________CU_GCA__ACACUGCCA
		______________\|\|_.\|\|__\|\|\|\|\|\|\|\|\|
		______________GA_UGU__UGUGACGGU
(miRNA)	3'	_____________C__U___UA_________	5'

UTR3

6mer

2609-2636

0.0093787191733527

Position on chromosome:

12:79845514-79845541

Conserved species:

panTro2,rheMac2,rn4,mm9,bosTau4,canFam2,dasNov2,loxAfr3,monDom5,galGal3,xenTro2

Binding area:

(Transcript)	5'	________C_UU__UGUAUAUU_______U	3'
		_CUAGUUG_C__UG________UACUGCC_
		_\|.\|\|.\|._\|__\|.________.\|\|\|\|\|\|_
		_GGUCGAU_G__AU________GUGACGG_
(miRNA)	3'	U_______U_UU_________________U	5'

UTR3

6mer

2684-2705

0.00469927787750304

Position on chromosome:

12:79845589-79845610

Conserved species:

panTro2,canFam2,loxAfr3

Binding area:

(Transcript)	5'	UAGAAAU_____G_UGUUUUC_U______	3'
		_______GUUGG_G_______C_CUGCCA
		_______\|.\|.._._______\|_\|\|\|\|\|\|
		_______CGAUU_U_______G_GACGGU
(miRNA)	3'	______U_____G_UAU_____U______	5'

ENSG00000153291 (SLC25A27)

hsa-miR-449a

0.999529146760505

Gene details
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miRNA details
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UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

7mer

1018-1035

0.00647202699266637

Position on chromosome:

6:46645210-46645227

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	AGCACUCACAA____CA____A____________	3'
		___________AUCA__CUAA______ACUGCCA
		___________\|.\|\|__\|\|\|\|______\|\|\|\|\|\|\|
		___________UGGU__GAUU______UGACGGU
(miRNA)	3'	_______________C_____GUUAUG_______	5'

UTR3

8mer

1386-1407

0.129436466856885

Position on chromosome:

6:46645578-46645599

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	GUGGUUG________GUAUACU________	3'
		_______CA_CUAAU_______CACUGCCA
		_______\|\|_\|\|\|\|._______\|\|\|\|\|\|\|\|
		_______GU_GAUUG_______GUGACGGU
(miRNA)	3'	______G__C_____UUAU___________	5'

ENSG00000175305 (CCNE2)

hsa-miR-449a

0.999502894259062

Gene details
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miRNA details
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UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

9mer

1732-1755

0.135021302160602

Position on chromosome:

8:95893730-95893753

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,monDom5

Binding area:

(Transcript)	5'	CCCUA____A__C____GU__________	3'
		_____GCCA_UU_ACAA__UACACUGCCA
		_____.\|\|\|_.\|_\|\|\|\|__\|\|\|\|\|\|\|\|\|\|
		_____UGGU_GA_UGUU__AUGUGACGGU
(miRNA)	3'	_________C__U________________	5'

ENSG00000009780 (FAM76A)

hsa-miR-449a

0.999459773373098

Gene details
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miRNA details
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UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

385-403

0.00623187819750926

Position on chromosome:

1:28087478-28087496

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,echTel1

Binding area:

(Transcript)	5'	UUUUUUUGGU__UU______U____UC______	3'
		__________CC______CA_UGCA__CUGCCA
		__________\|\|______\|\|_\|.\|\|__\|\|\|\|\|\|
		__________GG______GU_AUGU__GACGGU
(miRNA)	3'	_________U__UCGAUU__U____________	5'

UTR3

8mer

426-447

0.0474096512872865

Position on chromosome:

1:28087519-28087540

Conserved species:

panTro2,rheMac2,rn4,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	AGUUUGG________UAU___U________	3'
		_______CA_UUAAU___AUA_CACUGCCA
		_______\|\|_.\|\|\|.___\|\|\|_\|\|\|\|\|\|\|\|
		_______GU_GAUUG___UAU_GUGACGGU
(miRNA)	3'	______G__C_____U______________	5'

UTR3

7mer

447-471

0.0214566651576053

Position on chromosome:

1:28087540-28087564

Conserved species:

panTro2,rheMac2,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	UGCC___CU___A__UU__AAA_______	3'
		____ACC__CUG_AC__UG___ACUGCCA
		____\|\|\|__\|\|._\|\|__\|.___\|\|\|\|\|\|\|
		____UGG__GAU_UG__AU___UGACGGU
(miRNA)	3'	_______UC______UU__G_________	5'

UTR3

9mer

981-989

0.0585628150737099

Position on chromosome:

1:28088074-28088082

Conserved species:

panTro2,rheMac2,rn4,mm9,bosTau4,canFam2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	GUGAUUGAUUUUAAAUUCUC_________	3'
		____________________ACACUGCCA
		____________________\|\|\|\|\|\|\|\|\|
		____________________UGUGACGGU
(miRNA)	3'	___________________A_________	5'

ENSG00000134323 (MYCN)

hsa-miR-449a

0.999449480216702

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

13-29

0.0864977600096837

Position on chromosome:

2:16086233-16086249

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	CGCUUCUCAAAA__G_______________	3'
		____________CU_GACAGU_CACUGCCA
		____________\|\|_.\|\|\|.\|_\|\|\|\|\|\|\|\|
		____________GA_UUGUUA_GUGACGGU
(miRNA)	3'	___________C_________U________	5'

UTR3

8mer

570-586

0.0468546030330699

Position on chromosome:

2:16086790-16086806

Conserved species:

panTro2,rheMac2,oryCun2,canFam2,loxAfr3,echTel1,xenTro2

Binding area:

(Transcript)	5'	UAUGUACUGUA_____UCU_________U	3'
		___________CUAAU___UACACUGCC_
		___________\|\|\|\|.___\|\|\|\|\|\|\|\|\|_
		___________GAUUG___AUGUGACGG_
(miRNA)	3'	__________C_____UU__________U	5'

ENSG00000220205 (VAMP2)

hsa-miR-449a

0.999415113323906

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

777-792

0.00565408030343164

Position on chromosome:

17:8063244-8063259

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,dasNov2,loxAfr3,monDom5

Binding area:

(Transcript)	5'	UAUGUUAUGAUGG_____________U________	3'
		_____________ACCA____AUAAU___CUGCCA
		_____________\|\|\|\|____\|.\|\|\|___\|\|\|\|\|\|
		_____________UGGU____UGUUA___GACGGU
(miRNA)	3'	_________________CGAU_____UGU______	5'

UTR3

7mer

589-616

0.016076390249784

Position on chromosome:

17:8063056-8063083

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,monDom5

Binding area:

(Transcript)	5'	_____GUGUG__UG__GGUCAU_______U	3'
		_CAGU_____UG__GG______CACUGCC_
		_\|\|\|._____\|.__..______\|\|\|\|\|\|\|_
		_GUCG_____AU__UU______GUGACGG_
(miRNA)	3'	G___________UG__AU___________U	5'

UTR3

7mer

462-478

0.012915629648938

Position on chromosome:

17:8062929-8062945

Conserved species:

panTro2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3

Binding area:

(Transcript)	5'	AUUUGGGGGGU____CCC__U_________C	3'
		___________GUUG___CA___CACUGCC_
		___________\|.\|.___\|\|___\|\|\|\|\|\|\|_
		___________CGAU___GU___GUGACGG_
(miRNA)	3'	__________U____U____UAU_______U	5'

UTR3

6mer

445-462

0.0034848406390937

Position on chromosome:

17:8062912-8062929

Conserved species:

panTro2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2

Binding area:

(Transcript)	5'	CCAUCACUGC______C__UC_________C	3'
		__________CCAGCU__C__UG_ACUGCC_
		__________\|\|\|\|\|\|__\|__\|._\|\|\|\|\|\|_
		__________GGUCGA__G__AU_UGACGG_
(miRNA)	3'	_________U______UU_UU__G______U	5'

UTR3

8mer

408-425

0.0942311487096521

Position on chromosome:

17:8062875-8062892

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,monDom5

Binding area:

(Transcript)	5'	AUUUAGGGUGG__G__C_____________	3'
		___________GG_UA_UAGU_CACUGCCA
		___________.\|_\|\|_.\|.\|_\|\|\|\|\|\|\|\|
		___________UC_AU_GUUA_GUGACGGU
(miRNA)	3'	__________G__G__U____U________	5'

ENSG00000164823 (OSGIN2)

hsa-miR-449a

0.999324521442666

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

9mer

193-215

0.130007025245363

Position on chromosome:

8:90937954-90937976

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,canFam2,dasNov2,echTel1

Binding area:

(Transcript)	5'	UCACUG____ACA_____AA_________	3'
		______UCAG___AAUAG__ACACUGCCA
		______.\|\|\|___\|\|.\|.__\|\|\|\|\|\|\|\|\|
		______GGUC___UUGUU__UGUGACGGU
(miRNA)	3'	_____U____GA______A__________	5'

ENSG00000101084 (C20orf24)

hsa-miR-449a

0.999096853812849

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

9mer

204-222

0.125255988306354

Position on chromosome:

20:35240422-35240440

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,canFam2,dasNov2,echTel1,monDom5

Binding area:

(Transcript)	5'	GGUCAUUUGG____U__UU_____________	3'
		__________AUCA_CU_____UACACUGCCA
		__________\|.\|\|_\|\|_____\|\|\|\|\|\|\|\|\|\|
		__________UGGU_GA_____AUGUGACGGU
(miRNA)	3'	______________C__UUGUU__________	5'

ENSG00000133740 (E2F5)

hsa-miR-449a

0.999095569921932

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

7mer

353-376

0.0242115684922747

Position on chromosome:

8:86126451-86126474

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,dasNov2,echTel1,monDom5

Binding area:

(Transcript)	5'	UCAUU___UGU__U___UUUU________	3'
		_____ACU___CU_AUA____UACUGCCA
		_____\|\|.___\|\|_\|.\|____.\|\|\|\|\|\|\|
		_____UGG___GA_UGU____GUGACGGU
(miRNA)	3'	________UC___U___UAU_________	5'

UTR3

6mer

373-386

0.00349474911553018

Position on chromosome:

8:86126471-86126484

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	CUUAUAUUUUUACU_____________________U	3'
		______________GCCA_CUAA______ACUGCC_
		______________.\|\|\|_\|\|\|\|______\|\|\|\|\|\|_
		______________UGGU_GAUU______UGACGG_
(miRNA)	3'	__________________C____GUUAUG______U	5'

UTR3

8mer

410-430

0.0975264320281937

Position on chromosome:

8:86126508-86126528

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	CCUUCUAU___________ACGUU________	3'
		________CCA___AACAG_____CACUGCCA
		________\|\|\|___\|\|\|\|._____\|\|\|\|\|\|\|\|
		________GGU___UUGUU_____GUGACGGU
(miRNA)	3'	_______U___CGA_____AU___________	5'

ENSG00000131626 (PPFIA1)

hsa-miR-449a

0.998879805052782

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

3345-3365

0.121732382300206

Position on chromosome:

11:70230481-70230501

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,galGal3,xenTro2,danRer6

Binding area:

(Transcript)	5'	AUAAAGUA___AA___UUUUC________	3'
		________CUG__GCA_____CACUGCCA
		________\|\|.__.\|\|_____\|\|\|\|\|\|\|\|
		________GAU__UGU_____GUGACGGU
(miRNA)	3'	_______C________UAU__________	5'

ENSG00000068366 (ACSL4)

hsa-miR-449a

0.998844100361707

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

9mer

772-787

0.121218986740168

Position on chromosome:

X:108885338-108885353

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	CCCAACUCCCAAA______A____________	3'
		_____________AGCUAG____ACACUGCCA
		_____________\|\|\|\|\|.____\|\|\|\|\|\|\|\|\|
		_____________UCGAUU____UGUGACGGU
(miRNA)	3'	____________G______GUUA_________	5'

ENSG00000078725 (BRINP1)

hsa-miR-449a

0.99850337116814

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

9mer

59-74

0.12057998334657

Position on chromosome:

9:121928967-121928982

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	AUAUAUGUAAUGU____CUG_________	3'
		_____________ACAA___ACACUGCCA
		_____________\|\|\|\|___\|\|\|\|\|\|\|\|\|
		_____________UGUU___UGUGACGGU
(miRNA)	3'	____________U____A___________	5'

UTR3

8mer+wobble

1483-1507

0.00665090668470407

Position on chromosome:

9:121976316-121976340

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	CUGU_____AACAGC_____U________	3'
		____GCCAG______CAGUG_CGCUGCCA
		____.\|\|\|\|______\|\|.\|._\|.\|\|\|\|\|\|
		____UGGUC______GUUAU_GUGACGGU
(miRNA)	3'	_________GAUU________________	5'

UTR3

7mer

1206-1227

0.0051724657845919

Position on chromosome:

9:121971062-121971083

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	ACAGAG__AAA__AUC____C________C	3'
		______AC___AG____CAA_GCACUGCC_
		______\|\|___\|\|____\|\|\|_.\|\|\|\|\|\|\|_
		______UG___UC____GUU_UGUGACGG_
(miRNA)	3'	________G____GAUU___A________U	5'

ENSG00000071073 (MGAT4A)

hsa-miR-449a

0.998423631574098

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

5852-5874

0.0727690589155406

Position on chromosome:

2:99241421-99241443

Conserved species:

panTro2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	ACCAAU____U__UU_A____________	3'
		______GCCA_UU__C_AAUGCACUGCCA
		______.\|\|\|_.\|__\|_\|\|\|.\|\|\|\|\|\|\|\|
		______UGGU_GA__G_UUAUGUGACGGU
(miRNA)	3'	__________C__UU______________	5'

UTR3

6mer

3266-3277

0.00115548747222438

Position on chromosome:

2:99238835-99238846

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UAAAAACAUUUUUUUAC_____________________	3'
		_________________CCGGUU_________CUGCCA
		_________________\|\|.\|.\|_________\|\|\|\|\|\|
		_________________GGUCGA_________GACGGU
(miRNA)	3'	________________U______UUGUUAUGU______	5'

UTR3

8mer

502-524

0.0422169335419441

Position on chromosome:

2:99236071-99236093

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,dasNov2,monDom5,galGal3

Binding area:

(Transcript)	5'	UAUCGA___UA___UAA____________	3'
		______CAG__CUG___GAUGCACUGCCA
		______\|\|\|__\|\|.___.\|\|.\|\|\|\|\|\|\|\|
		______GUC__GAU___UUAUGUGACGGU
(miRNA)	3'	_____G________UG_____________	5'

ENSG00000175352 (NRIP3)

hsa-miR-449a

0.998288581282401

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

9mer

2717-2735

0.106031411733734

Position on chromosome:

11:9004840-9004858

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3

Binding area:

(Transcript)	5'	UAACUUAUAG___UU__UUG____________	3'
		__________ACC__UU______ACACUGCCA
		__________\|\|\|__.\|______\|\|\|\|\|\|\|\|\|
		__________UGG__GA______UGUGACGGU
(miRNA)	3'	_____________UC__UUGUUA_________	5'

UTR3

6mer

2646-2669

0.00347052375836091

Position on chromosome:

11:9004769-9004792

Conserved species:

panTro2,rheMac2,rn4,mm9,canFam2,loxAfr3

Binding area:

(Transcript)	5'	CUUUU______C__GU__AG_G_______	3'
		_____AUUAGU_AA__AU__G_GCUGCCA
		_____\|..\|\|._\|\|__\|\|__._.\|\|\|\|\|\|
		_____UGGUCG_UU__UA__U_UGACGGU
(miRNA)	3'	___________A__GU_____G_______	5'

UTR3

6mer

1681-1700

0.00337092353715232

Position on chromosome:

11:9003804-9003823

Conserved species:

panTro2,rheMac2,oryCun2,dasNov2

Binding area:

(Transcript)	5'	AUGUUAAG_____CUUUU___A______C	3'
		________GACAA_____UAU_ACUGCC_
		________.\|\|\|\|_____\|\|._\|\|\|\|\|\|_
		________UUGUU_____AUG_UGACGG_
(miRNA)	3'	_______A____________________U	5'

UTR3

6mer

1390-1415

0.00192295450332517

Position on chromosome:

11:9003513-9003538

Conserved species:

panTro2,rheMac2,canFam2,loxAfr3

Binding area:

(Transcript)	5'	CU___UUGU____UGUU___CA_______C	3'
		__ACC____CUGG____CAG___ACUGCC_
		__\|\|\|____\|\|..____\|\|.___\|\|\|\|\|\|_
		__UGG____GAUU____GUU___UGACGG_
(miRNA)	3'	_____UC_____________AUG______U	5'