DIANA TOOLS - MicroT-CDS

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Results: 1401 targets for miRNAs hsa-miR-330-3p

. Threshold is set to 0.7.

Name:	hsa-miR-330-3p
Alternative description:	MIMAT0000751
Related names:
miRNA sequence:	gcaaagcacacggccugcagaga
External links:	miRBase
DIANA resources:	microT-CDS
Related diseases:	Adenocarcinoma Anemia, Sickle Cell Breast Neoplasms Breast Neoplasms, Male Carcinoma, Hepatocellular Carcinoma, Squamous Cell Cell Transformation, Neoplastic Diabetes Mellitus, Type 2 Glioblastoma Hematologic Neoplasms Huntington Disease Hyperglycemia Hyperinsulinism Liver Neoplasms Lymphoma, Follicular Lymphoma, Large B-Cell, Diffuse Melanoma Metabolic Syndrome X Mouth Neoplasms Neuroblastoma Pregnancy Complications Prostatic Neoplasms Protein Deficiency Uterine Cervical Neoplasms

Ensembl Gene Id

miRNA name

miTG score

Also Predicted

ENSG00000206199 (ANKUB1)

hsa-miR-330-3p

0.995493693174379

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

7mer

1369-1394

0.032525753052003

Position on chromosome:

3:149508573-149508598

Conserved species:

panTro2,rheMac2,rn4,mm9,bosTau4,canFam2,dasNov2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	UC_______UCAACUC__AAA_______U	3'
		__UUUCUGU_______UC___UGCUUUG_
		__\|.\|\|\|\|._______.\|___\|\|\|\|\|\|\|_
		__AGAGACG_______GG___ACGAAAC_
(miRNA)	3'	_________UCC______CAC_______G	5'

UTR3

8mer

46-66

0.0664007576156379

Position on chromosome:

3:149479272-149479292

Conserved species:

panTro2,rn4,mm9,oryCun2,bosTau4,canFam2

Binding area:

(Transcript)	5'	GUGAAAA____C___AAA___________A	3'
		_______CUCU_UAG___C_UGUGCUUUG_
		_______\|\|\|\|_.\|\|___\|_\|\|\|\|\|\|\|\|\|_
		_______GAGA_GUC___G_ACACGAAAC_
(miRNA)	3'	______A____C___CG__C_________G	5'

ENSG00000255439 (RP11-196G11.1)

hsa-miR-330-3p

0.995165622670264

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

1959-1981

0.0271189350434511

Position on chromosome:

16:31102417-31102439

Conserved species:

panTro2,rn4,mm9,oryCun2

Binding area:

(Transcript)	5'	CCAAGC_______ACCUCAUC________	3'
		______CAGGCUG________UGCUUUGC
		______\|\|\|\|\|.\|________\|\|\|\|\|\|\|\|
		______GUCCGGC________ACGAAACG
(miRNA)	3'	_____C_______AC______________	5'

UTR3

7mer

1955-1981

0.0125881875291649

Position on chromosome:

16:31099148;31102413-31099147;31102439

Conserved species:

panTro2,loxAfr3

Binding area:

(Transcript)	5'	C_______ACCUCAUC__CUU_______G	3'
		_CAGGCUG________UG___UGCUUUG_
		_\|\|\|\|\|.\|________\|\|___\|\|\|\|\|\|\|_
		_GUCCGGC________AC___ACGAAAC_
(miRNA)	3'	C___________________________G	5'

UTR3

7mer

1775-1792

0.0492473043372276

Position on chromosome:

16:31098862-31098879

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,xenTro2

Binding area:

(Transcript)	5'	UGGGUCCUCA____U____CAC_______A	3'
		__________CUGC__GCC___UGCUUUG_
		__________\|\|\|\|__\|\|\|___\|\|\|\|\|\|\|_
		__________GACG__CGG___ACGAAAC_
(miRNA)	3'	_________A____UC___CAC_______G	5'

UTR3

7mer

1276-1298

0.00881813528479858

Position on chromosome:

16:31097431-31097453

Conserved species:

panTro2,rheMac2,oryCun2,canFam2

Binding area:

(Transcript)	5'	UGGGUU_______GCAUCAUCA_______	3'
		______CAGGCUG_________GCUUUGC
		______\|\|\|\|\|.\|_________\|\|\|\|\|\|\|
		______GUCCGGC_________CGAAACG
(miRNA)	3'	_____C_______ACA_____________	5'

ENSG00000115464 (USP34)

hsa-miR-330-3p

0.994846281376852

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

7mer

1195-1214

0.0569788461216057

Position on chromosome:

2:61622053-61622072

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,monDom5,tetNig2,fr2,danRer6

Binding area:

(Transcript)	5'	GGCCUUUC____A__A___AU__________A	3'
		________UCUC_UG_AGG_____UGCUUUG_
		________\|\|\|\|_\|\|_\|\|\|_____\|\|\|\|\|\|\|_
		________AGAG_AC_UCC_____ACGAAAC_
(miRNA)	3'	_______________G___GGCAC_______G	5'

UTR3

6mer

1171-1199

0.00498947541500814

Position on chromosome:

2:61622029-61622057

Conserved species:

panTro2,rheMac2,oryCun2,dasNov2,loxAfr3

Binding area:

(Transcript)	5'	______AAUAU__AACU_____AAA______	3'
		_CUUUG_____GG____CC_UG___CUUUGC
		_\|\|.\|\|_____\|\|____\|\|_\|\|___\|\|\|\|\|\|
		_GAGAC_____CC____GG_AC___GAAACG
(miRNA)	3'	A_____GU___________C__AC_______	5'

UTR3

7mer

952-973

0.0347535351178619

Position on chromosome:

2:61607387-61607408

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,galGal3,xenTro2,fr2

Binding area:

(Transcript)	5'	GAACCA___G_UA_AACAUUA_______A	3'
		______UUG_A__C_______UGCUUUG_
		______.\|\|_\|__\|_______\|\|\|\|\|\|\|_
		______GAC_U__G_______ACGAAAC_
(miRNA)	3'	_____A___G_CC_GCAC__________G	5'

ENSG00000198960 (ARMCX6)

hsa-miR-330-3p

0.993499397427985

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

409-431

0.00590746790765227

Position on chromosome:

X:100870519-100870541

Conserved species:

panTro2,rheMac2,bosTau4,canFam2

Binding area:

(Transcript)	5'	GCCAG_____GGCU__CACAGA______A	3'
		_____GCAGG____CC______GCUUUG_
		_____\|\|\|\|\|____\|\|______\|\|\|\|\|\|_
		_____CGUCC____GG______CGAAAC_
(miRNA)	3'	____A___________CACA________G	5'

UTR3

7mer

225-252

0.0053135460210541

Position on chromosome:

X:100870335-100870362

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	G____CCUGUCCAA_____A_____________	3'
		_UCUC_________GCGGG_CC____GCUUUGC
		_\|\|\|\|_________\|\|.\|\|_\|\|____\|\|\|\|\|\|\|
		_AGAG_________CGUCC_GG____CGAAACG
(miRNA)	3'	_____A________________CACA_______	5'

UTR3

8mer

12-24

0.0816840215031063

Position on chromosome:

X:100870122-100870134

Conserved species:

panTro2,rheMac2,rn4,mm9,canFam2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	UGUAUCAUCAAUAAA_____________A	3'
		_______________GUUGUGUGCUUUG_
		_______________\|..\|\|\|\|\|\|\|\|\|\|_
		_______________CGGCACACGAAAC_
(miRNA)	3'	______________C_____________G	5'

ENSG00000107897 (ACBD5)

hsa-miR-330-3p

0.99298104092313

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

1391-1413

0.0416005044188354

Position on chromosome:

10:27485537-27485559

Conserved species:

panTro2,rheMac2,rn4,mm9,bosTau4,canFam2,dasNov2,loxAfr3,monDom5

Binding area:

(Transcript)	5'	UCUAG_G_____UUCAUAGG________A	3'
		_____U_UCUGC________GUGCUUUG_
		_____\|_\|\|\|\|\|________\|\|\|\|\|\|\|\|_
		_____A_AGACG________CACGAAAC_
(miRNA)	3'	______G_____UCCGGCA_________G	5'

UTR3

8mer

1028-1053

0.0118508530352576

Position on chromosome:

10:27485174-27485199

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UG___ACU___AUGUA__U_________A	3'
		__CUC___UAG_____CC_UGUGCUUUG_
		__\|\|\|___.\|\|_____\|\|_\|\|\|\|\|\|\|\|\|_
		__GAG___GUC_____GG_ACACGAAAC_
(miRNA)	3'	_A___AC____C______C_________G	5'

UTR3

6mer

165-189

0.0149892734231446

Position on chromosome:

10:27484311-27484335

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,monDom5

Binding area:

(Transcript)	5'	CUUA____A___U___AAAAGCA______	3'
		____UUUU_UAG_UUG_______CUUUGC
		____.\|.\|_.\|\|_..\|_______\|\|\|\|\|\|
		____GAGA_GUC_GGC_______GAAACG
(miRNA)	3'	___A____C___C___ACAC_________	5'

UTR3

7mer

106-128

0.0247944375490832

Position on chromosome:

10:27484252-27484274

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,monDom5

Binding area:

(Transcript)	5'	AAUUA____AUAUA___UUCC_______U	3'
		_____UAGG_____GUG____UGCUUUG_
		_____.\|\|\|_____\|\|\|____\|\|\|\|\|\|\|_
		_____GUCC_____CAC____ACGAAAC_
(miRNA)	3'	____C____GG_________________G	5'

UTR3

8mer

176-197

0.0101460769012135

Position on chromosome:

10:27497177-27497198

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	GCAGAAA___G_AAC____AC________	3'
		_______CUG_A___GCUG__UGCUUUGC
		_______\|\|\|_\|___\|\|.\|__\|\|\|\|\|\|\|\|
		_______GAC_U___CGGC__ACGAAACG
(miRNA)	3'	______A___G_C______AC________	5'

ENSG00000131831 (RAI2)

hsa-miR-330-3p

0.992545148400936

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

62-85

0.090650696110234

Position on chromosome:

X:17818231-17818254

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	GCUA_______UU___ACAAA________A	3'
		____UUUU_CA__GCC_____GUGCUUUG_
		____.\|.\|_\|\|__\|\|\|_____\|\|\|\|\|\|\|\|_
		____GAGA_GU__CGG_____CACGAAAC_
(miRNA)	3'	___A____C__C____CA___________G	5'

ENSG00000068305 (MEF2A)

hsa-miR-330-3p

0.992312069378955

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

7mer

409-427

0.0211036553312006

Position on chromosome:

15:100253386-100253404

Conserved species:

panTro2,rheMac2,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	CUGUAGUUA__UA__A_AAAA________U	3'
		_________CU__AG_G_____UGCUUUG_
		_________\|\|__\|\|_\|_____\|\|\|\|\|\|\|_
		_________GA__UC_C_____ACGAAAC_
(miRNA)	3'	________A__CG____GGCAC_______G	5'

UTR3

7mer

1694-1718

0.00447239847960203

Position on chromosome:

15:100254671-100254695

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	CUC_______CAUU__A___A_______G	3'
		___UUCUGCA____GC_GUG_UGCUUUG_
		___.\|\|\|\|\|\|____\|\|_\|\|\|_\|\|\|\|\|\|\|_
		___GAGACGU____CG_CAC_ACGAAAC_
(miRNA)	3'	__A_______C_____G___________G	5'

UTR3

6mer

2409-2432

0.00472896263377165

Position on chromosome:

15:100255386-100255409

Conserved species:

panTro2,rheMac2,mm9,oryCun2,canFam2,dasNov2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	ACCA_______AA__AUUUAUA______A	3'
		____CUUUGUA__CC_______GCUUUG_
		____\|\|.\|\|.\|__\|\|_______\|\|\|\|\|\|_
		____GAGACGU__GG_______CGAAAC_
(miRNA)	3'	___A_______CC__CACA_________G	5'

UTR3

6mer

3346-3372

0.0139403956801726

Position on chromosome:

15:100256323-100256349

Conserved species:

panTro2,rheMac2,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,monDom5,galGal3,tetNig2,fr2,danRer6

Binding area:

(Transcript)	5'	UU_________AAACUUUCUUCA______	3'
		__UCUCUGUAG____________CUUUGC
		__\|\|\|\|\|\|.\|\|____________\|\|\|\|\|\|
		__AGAGACGUC____________GAAACG
(miRNA)	3'	___________CGGCACAC__________	5'

UTR3

8mer

3372-3395

0.0477398416870378

Position on chromosome:

15:100256349-100256372

Conserved species:

panTro2,rheMac2,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,tetNig2,fr2,danRer6

Binding area:

(Transcript)	5'	CUUUG__G____A_AA_ACAC________	3'
		_____CU_UGCA_G__G____UGCUUUGC
		_____\|\|_\|\|\|\|_\|__\|____\|\|\|\|\|\|\|\|
		_____GA_ACGU_C__C____ACGAAACG
(miRNA)	3'	____A__G____C_GG_AC__________	5'

UTR3

7mer

446-461

0.0122563164190327

Position on chromosome:

15:100214648-100214663

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	AGUUCCAGUGAC___C__CAA_______U	3'
		____________CAG_CC___UGCUUUG_
		____________\|\|\|_\|\|___\|\|\|\|\|\|\|_
		____________GUC_GG___ACGAAAC_
(miRNA)	3'	___________C___C__CAC_______G	5'

ENSG00000158711 (ELK4)

hsa-miR-330-3p

0.992155962954964

Gene details
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miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

8310-8321

0.00670272866853037

Position on chromosome:

1:205585381-205585392

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,loxAfr3

Binding area:

(Transcript)	5'	UUCUCCUUUAAAAAUA_____A_______________U	3'
		________________UUUUG__________GCUUUG_
		________________.\|.\|\|__________\|\|\|\|\|\|_
		________________GAGAC__________CGAAAC_
(miRNA)	3'	_______________A_____GUCCGGCACA______G	5'

UTR3

9mer

8268-8296

0.0176424794113403

Position on chromosome:

1:205585339-205585367

Conserved species:

panTro2,rheMac2,oryCun2

Binding area:

(Transcript)	5'	_____GU__G_UUUAGUGAC__________	3'
		_UUUG__GG_C_________UGUGCUUUGC
		_\|.\|\|__\|\|_\|_________\|\|\|\|\|\|\|\|\|\|
		_AGAC__CC_G_________ACACGAAACG
(miRNA)	3'	G____GU__G_C__________________	5'

UTR3

6mer

7809-7831

0.00196370842590135

Position on chromosome:

1:205584880-205584902

Conserved species:

panTro2

Binding area:

(Transcript)	5'	CUCACA___AGCA___AAA__CU________	3'
		______UCU____CAG___UG____CUUUGC
		______\|\|\|____\|\|\|___.\|____\|\|\|\|\|\|
		______AGA____GUC___GC____GAAACG
(miRNA)	3'	_________GAC____CG___ACAC______	5'

UTR3

6mer

5896-5921

0.00218722721490484

Position on chromosome:

1:205582967-205582992

Conserved species:

panTro2,rheMac2,bosTau4,canFam2,dasNov2

Binding area:

(Transcript)	5'	UAG___GUAUC__UC__UAGUCA______	3'
		___CUC_____CA__CC______CUUUGC
		___\|\|\|_____\|\|__\|\|______\|\|\|\|\|\|
		___GAG_____GU__GG______GAAACG
(miRNA)	3'	__A___AC_____CC__CACAC_______	5'

UTR3

6mer

2744-2754

0.00202511948422083

Position on chromosome:

1:205579815-205579825

Conserved species:

panTro2,rheMac2,bosTau4,canFam2,loxAfr3,monDom5

Binding area:

(Transcript)	5'	AAAACUUAAAAAAAUUUG____________________	3'
		__________________CUGCA_________CUUUGC
		__________________\|\|\|\|\|_________\|\|\|\|\|\|
		__________________GACGU_________GAAACG
(miRNA)	3'	_________________A_____CCGGCACAC______	5'

UTR3

8mer

2712-2735

0.00367826509185828

Position on chromosome:

1:205579783-205579806

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UGCCA____UUAAA__AUUAA_________	3'
		_____CUUU_____AG______UGCUUUGC
		_____\|\|.\|_____\|\|______\|\|\|\|\|\|\|\|
		_____GAGA_____UC______ACGAAACG
(miRNA)	3'	____A____CG_____CGGCAC________	5'

UTR3

6mer

2329-2354

0.00184994666136253

Position on chromosome:

1:205579400-205579425

Conserved species:

panTro2,rn4,mm9,canFam2,loxAfr3

Binding area:

(Transcript)	5'	CUU______AA__AUCUUCUCAA______	3'
		___GGGCUG__UG__________CUUUGC
		___.\|\|\|.\|__\|\|__________\|\|\|\|\|\|
		___UCCGGC__AC__________GAAACG
(miRNA)	3'	__G______AC__________________	5'

UTR3

8mer

1852-1878

0.0204212542611665

Position on chromosome:

1:205578923-205578949

Conserved species:

panTro2,rheMac2,rn4,mm9,bosTau4,canFam2,dasNov2

Binding area:

(Transcript)	5'	A______A___UUUAAUAU_________U	3'
		_UUUGCA_GCU________UGUGCUUUG_
		_\|.\|\|\|\|_\|\|.________\|\|\|\|\|\|\|\|\|_
		_AGACGU_CGG________ACACGAAAC_
(miRNA)	3'	G______C___C________________G	5'

UTR3

6mer

1275-1301

0.00225591178861569

Position on chromosome:

1:205578346-205578372

Conserved species:

panTro2

Binding area:

(Transcript)	5'	GG__AAAAAAUA___G_A___AA______	3'
		__CU________AGG_U_UGU__CUUUGC
		__\|\|________\|\|\|_._\|\|\|__\|\|\|\|\|\|
		__GA________UCC_G_ACA__GAAACG
(miRNA)	3'	_A__GACG_______G_C___C_______	5'

UTR3

7mer

141-161

0.0310859246882772

Position on chromosome:

1:205577212-205577232

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	GUAAGAA___ACAG___AAUU________U	3'
		_______CUG____AGG_____UGCUUUG_
		_______\|\|\|____\|\|\|_____\|\|\|\|\|\|\|_
		_______GAC____UCC_____ACGAAAC_
(miRNA)	3'	______A___G______GGCAC_______G	5'

ENSG00000170561 (IRX2)

hsa-miR-330-3p

0.991084170851743

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

7mer

921-941

0.0877016551359258

Position on chromosome:

5:2746880-2746900

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,tetNig2,fr2,danRer6

Binding area:

(Transcript)	5'	AAUGCAA_________CACAAU_______A	3'
		_______GUAGGU_GU______UGCUUUG_
		_______\|.\|\|\|._\|\|______\|\|\|\|\|\|\|_
		_______CGUCCG_CA______ACGAAAC_
(miRNA)	3'	______A______G__C____________G	5'

ENSG00000126016 (AMOT)

hsa-miR-330-3p

0.99005238776493

Gene details
	loading...
miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

3433-3454

0.0261808605605841

Position on chromosome:

X:112021164-112021185

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2

Binding area:

(Transcript)	5'	UGUUUG___U__UU__A__G________G	3'
		______UCU_CA__UC_GU_GUGCUUUG_
		______\|\|\|_\|\|__.\|_\|\|_\|\|\|\|\|\|\|\|_
		______AGA_GU__GG_CA_CACGAAAC_
(miRNA)	3'	_____G___C__CC______________G	5'

UTR3

7mer

3060-3085

0.0156952035569006

Position on chromosome:

X:112020791-112020816

Conserved species:

panTro2,rheMac2,canFam2,loxAfr3

Binding area:

(Transcript)	5'	GA______UUGA_______AA_______A	3'
		__UCUUUG____CAGGUUG__UGCUUUG_
		__\|\|\|.\|\|____\|\|\|\|..\|__\|\|\|\|\|\|\|_
		__AGAGAC____GUCCGGC__ACGAAAC_
(miRNA)	3'	___________________AC_______G	5'

UTR3

7mer

352-377

0.0216550922849382

Position on chromosome:

X:112018083-112018108

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4

Binding area:

(Transcript)	5'	AA_____UA_____UGGAAAA_______G	3'
		__UGCAG__CCGUG_______UGCUUUG_
		__\|\|\|\|\|__\|\|\|\|\|_______\|\|\|\|\|\|\|_
		__ACGUC__GGCAC_______ACGAAAC_
(miRNA)	3'	_G_____C____________________G	5'

UTR3

7mer

134-161

0.0223637420733097

Position on chromosome:

X:112017865-112017892

Conserved species:

panTro2,rheMac2,rn4,mm9,bosTau4,canFam2

Binding area:

(Transcript)	5'	A________AGCAUAUAUUAAAA_______	3'
		_CU_CAGGC______________GCUUUGC
		_\|\|_\|\|\|\|\|______________\|\|\|\|\|\|\|
		_GA_GUCCG______________CGAAACG
(miRNA)	3'	A__C_____GCACA________________	5'

ENSG00000155966 (AFF2)

hsa-miR-330-3p

0.987720865575896

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

904-918

0.00175315743776683

Position on chromosome:

X:148073767-148073781

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	CAAGGAAUUCACAC______CUC_____________	3'
		______________CUCUGC__________CUUUGC
		______________\|\|\|\|\|\|__________\|\|\|\|\|\|
		______________GAGACG__________GAAACG
(miRNA)	3'	_____________A______UCCGGCACAC______	5'

UTR3

7mer

1309-1330

0.00752244524405161

Position on chromosome:

X:148074172-148074193

Conserved species:

panTro2,rheMac2,canFam2,monDom5

Binding area:

(Transcript)	5'	GGGUAG___UUCA__U__AGA_______A	3'
		______UGC____CC_UG___UGCUUUG_
		______\|\|\|____\|\|_\|\|___\|\|\|\|\|\|\|_
		______ACG____GG_AC___ACGAAAC_
(miRNA)	3'	_____G___UCC___C____________G	5'

UTR3

6mer

2939-2954

0.00265585763375091

Position on chromosome:

X:148075802-148075817

Conserved species:

panTro2,rheMac2,bosTau4,canFam2,loxAfr3

Binding area:

(Transcript)	5'	UUUGUGUUAUGA___U______________U	3'
		____________UGU_GGCU_UG_GCUUUG_
		____________\|\|._\|\|\|._\|\|_\|\|\|\|\|\|_
		____________ACG_CCGG_AC_CGAAAC_
(miRNA)	3'	___________G___U____C__A______G	5'

UTR3

7mer

4311-4332

0.00589672658086535

Position on chromosome:

X:148077174-148077195

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	AUCAUUC____AAG__A___GA________	3'
		_______UUCU___AG_UUG___GCUUUGC
		_______.\|\|\|___\|\|_..\|___\|\|\|\|\|\|\|
		_______GAGA___UC_GGC___CGAAACG
(miRNA)	3'	______A____CG___C___ACA_______	5'

UTR3

7mer

7882-7905

0.00931969699587416

Position on chromosome:

X:148080745-148080768

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,loxAfr3

Binding area:

(Transcript)	5'	CUGG___A___C__G____UU_______U	3'
		____UCU_UAG_GU_UGUG__UGCUUUG_
		____\|\|\|_.\|\|_\|._.\|\|\|__\|\|\|\|\|\|\|_
		____AGA_GUC_CG_GCAC__ACGAAAC_
(miRNA)	3'	___G___C____________________G	5'

UTR3

7mer

8151-8168

0.00541032300937596

Position on chromosome:

X:148081014-148081031

Conserved species:

panTro2,rheMac2,bosTau4,loxAfr3

Binding area:

(Transcript)	5'	GGGAAUUUAA___U______AUA_______U	3'
		__________UUG_CA__UC___UGCUUUG_
		__________.\|\|_\|\|__.\|___\|\|\|\|\|\|\|_
		__________GAC_GU__GG___ACGAAAC_
(miRNA)	3'	_________A______CC__CAC_______G	5'

UTR3

6mer

8436-8450

0.00270743772137018

Position on chromosome:

X:148081299-148081313

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	GAAAAUUCCUUUC____U____AA__________G	3'
		_____________CUCU___GG______GCUUUG_
		_____________\|\|\|\|___\|\|______\|\|\|\|\|\|_
		_____________GAGA___CC______CGAAAC_
(miRNA)	3'	____________A____CGU__GGCACA______G	5'

UTR3

7mer

9087-9105

0.0183643166843582

Position on chromosome:

X:148081950-148081968

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	UAAAACUAUA______________G_______	3'
		__________UCUGC___CUGUGU_GCUUUGC
		__________\|\|\|\|\|___\|.\|\|\|\|_\|\|\|\|\|\|\|
		__________AGACG___GGCACA_CGAAACG
(miRNA)	3'	_________G_____UCC______________	5'

UTR3

8mer

9128-9146

0.0287848752647122

Position on chromosome:

X:148081991-148082009

Conserved species:

panTro2,rheMac2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	GGCGCACAA___UUUU_____________U	3'
		_________GCG____GUUG_GUGCUUUG_
		_________\|\|.____\|..\|_\|\|\|\|\|\|\|\|_
		_________CGU____CGGC_CACGAAAC_
(miRNA)	3'	________A___C_______A________G	5'

ENSG00000166167 (BTRC)

hsa-miR-330-3p

0.98771617196219

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

116-142

0.00484996755468953

Position on chromosome:

10:103312997-103313023

Conserved species:

panTro2,rheMac2,mm9,canFam2,loxAfr3

Binding area:

(Transcript)	5'	C___G_CUA____A_GAGCAGG______A	3'
		_CUG_A___GCCG_G_______GCUUUG_
		_\|\|\|_\|___\|\|\|\|_\|_______\|\|\|\|\|\|_
		_GAC_U___CGGC_C_______CGAAAC_
(miRNA)	3'	A___G_C______A_A____________G	5'

UTR3

8mer

353-378

0.0414461334250998

Position on chromosome:

10:103313234-103313259

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,monDom5,galGal3

Binding area:

(Transcript)	5'	GUG______C__AAUC__UCU________	3'
		___UUUUGC_AG____UC___UGCUUUGC
		___.\|.\|\|\|_\|\|____.\|___\|\|\|\|\|\|\|\|
		___GAGACG_UC____GG___ACGAAACG
(miRNA)	3'	__A_________C_____CAC________	5'

UTR3

6mer

1214-1232

0.00206048144289455

Position on chromosome:

10:103314095-103314113

Conserved species:

panTro2,rheMac2,bosTau4,canFam2,dasNov2

Binding area:

(Transcript)	5'	UGUGAAUACC____UG______AU______	3'
		__________CAGG__CC_UGU__CUUUGC
		__________\|\|\|\|__\|\|_\|\|\|__\|\|\|\|\|\|
		__________GUCC__GG_ACA__GAAACG
(miRNA)	3'	_________C________C___C_______	5'

UTR3

7mer

4028-4049

0.034957064780993

Position on chromosome:

10:103316909-103316930

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	UCUAGA____UA__UA____AC_______A	3'
		______CUCU__AG__C_UG__UGCUUUG_
		______\|\|\|\|__\|\|__\|_\|\|__\|\|\|\|\|\|\|_
		______GAGA__UC__G_AC__ACGAAAC_
(miRNA)	3'	_____A____CG__CG_C___________G	5'

UTR3

7mer

1480-1502

0.00872239738477085

Position on chromosome:

10:103298061-103298083

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	UAAAG______AUCU____GC_______G	3'
		_____UGUGGG____UGUG__UGCUUUG_
		_____\|\|..\|\|____.\|\|\|__\|\|\|\|\|\|\|_
		_____ACGUCC____GCAC__ACGAAAC_
(miRNA)	3'	____G______G________________G	5'

ENSG00000198265 (HELZ)

hsa-miR-330-3p

0.987457293256243

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

7678-7697

0.0298034671051706

Position on chromosome:

17:65074232-65074251

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,galGal3

Binding area:

(Transcript)	5'	UUAAAUAUG_______CUUAAU_________	3'
		_________UUCU_CA_______UGCUUUGC
		_________.\|\|\|_\|\|_______\|\|\|\|\|\|\|\|
		_________GAGA_GU_______ACGAAACG
(miRNA)	3'	________A____C__CCGGCAC________	5'

UTR3

6mer

7178-7190

0.00508569409842898

Position on chromosome:

17:65073732-65073744

Conserved species:

panTro2,rheMac2,mm9,oryCun2,canFam2,dasNov2,loxAfr3,galGal3

Binding area:

(Transcript)	5'	CAUAGGAUAGAGUUAA____AUU_________	3'
		________________AGGC______CUUUGC
		________________\|\|\|\|______\|\|\|\|\|\|
		________________UCCG______GAAACG
(miRNA)	3'	_______________G____GCACAC______	5'

UTR3

7mer

6579-6602

0.00751701388840338

Position on chromosome:

17:65073133-65073156

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	AAUA____ACCAUCUAAAAAU_______A	3'
		____UUCU_____________UGCUUUG_
		____.\|\|\|_____________\|\|\|\|\|\|\|_
		____GAGA_____________ACGAAAC_
(miRNA)	3'	___A____CGUCCGGCAC__________G	5'

UTR3

7mer

6073-6098

0.00263825449285371

Position on chromosome:

17:65072627-65072652

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	GAG_______UCAUUUG_____G_______	3'
		___UGC_GGU_______UGUGU_GCUUUGC
		___\|\|\|_\|\|._______.\|\|\|\|_\|\|\|\|\|\|\|
		___ACG_CCG_______GCACA_CGAAACG
(miRNA)	3'	__G___U_______________________	5'

UTR3

6mer

5486-5503

0.00201928795324616

Position on chromosome:

17:65072040-65072057

Conserved species:

panTro2,rheMac2,bosTau4,canFam2,loxAfr3

Binding area:

(Transcript)	5'	UAUAAAUAUG___AUGA___GAA______G	3'
		__________UUG_____UG___GCUUUG_
		__________.\|\|_____.\|___\|\|\|\|\|\|_
		__________GAC_____GC___CGAAAC_
(miRNA)	3'	_________A___GUCCG__ACA______G	5'

UTR3

8mer

4590-4613

0.0078659365744204

Position on chromosome:

17:65071144-65071167

Conserved species:

panTro2,rheMac2,canFam2,loxAfr3

Binding area:

(Transcript)	5'	UUUGG____CAUUU____AUA_________	3'
		_____UUGU_____GGGC____UGCUUUGC
		_____.\|\|._____.\|\|\|____\|\|\|\|\|\|\|\|
		_____GACG_____UCCG____ACGAAACG
(miRNA)	3'	____A_____________GCAC________	5'

UTR3

7mer

4443-4464

0.0034046655425577

Position on chromosome:

17:65070997-65071018

Conserved species:

panTro2,rheMac2,canFam2,echTel1,monDom5

Binding area:

(Transcript)	5'	UUUACA____AAAUAACAAAC_______U	3'
		______CGUG___________UGCUUUG_
		______\|\|\|\|___________\|\|\|\|\|\|\|_
		______GCAC___________ACGAAAC_
(miRNA)	3'	_____G______________________G	5'

UTR3

6mer

3641-3663

0.00221658555366889

Position on chromosome:

17:65070195-65070217

Conserved species:

panTro2,rheMac2,bosTau4,canFam2,loxAfr3

Binding area:

(Transcript)	5'	AAUGGA____AUUU___UCCACU______	3'
		______UCUG____GUC______CUUUGC
		______\|\|\|\|____\|.\|______\|\|\|\|\|\|
		______AGAC____CGG______GAAACG
(miRNA)	3'	_____G____GUC____CACAC_______	5'

UTR3

6mer

2836-2857

0.00185567398100283

Position on chromosome:

17:65069390-65069411

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UAUGAGG_____U________AUUUUA______	3'
		_______UCUCU_____CUGU______CUUUGC
		_______\|\|\|\|\|_____\|.\|\|______\|\|\|\|\|\|
		_______AGAGA_____GGCA______GAAACG
(miRNA)	3'	____________CGUCC____CAC_________	5'

UTR3

6mer

1422-1437

0.00274426699412029

Position on chromosome:

17:65067976-65067991

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,loxAfr3

Binding area:

(Transcript)	5'	CAGAAAAUAAAUG______AUUA_____________	3'
		_____________UCUCUG___________CUUUGC
		_____________\|\|\|\|\|\|___________\|\|\|\|\|\|
		_____________AGAGAC___________GAAACG
(miRNA)	3'	___________________GUCCGGCACAC______	5'

UTR3

6mer

1063-1082

0.00244524249693044

Position on chromosome:

17:65067617-65067636

Conserved species:

panTro2,rheMac2,bosTau4

Binding area:

(Transcript)	5'	GAAGACCA_______AAUAUACA______G	3'
		________UC_GUAG________GCUUUG_
		________\|\|_\|.\|\|________\|\|\|\|\|\|_
		________AG_CGUC________CGAAAC_
(miRNA)	3'	_______G__A____CGGCACA_______G	5'

UTR3

6mer

930-955

0.00272869029381785

Position on chromosome:

17:65067484-65067509

Conserved species:

panTro2,bosTau4,monDom5

Binding area:

(Transcript)	5'	AGG_G__CU___GUUUAUUUACA______	3'
		___G_AG__UCG___________CUUUGC
		___\|_\|\|__.\|\|___________\|\|\|\|\|\|
		___C_UC__GGC___________GAAACG
(miRNA)	3'	__A_G__C____ACAC_____________	5'

UTR3

8mer

925-952

0.00601921476867493

Position on chromosome:

17:65067479-65067506

Conserved species:

panTro2,bosTau4,canFam2,loxAfr3

Binding area:

(Transcript)	5'	A__U_____GUUUAUUUACACUU________	3'
		_GC___UCG______________UGCUUUGC
		_\|\|___.\|\|______________\|\|\|\|\|\|\|\|
		_CG___GGC______________ACGAAACG
(miRNA)	3'	A__UCC___AC____________________	5'

UTR3

6mer

332-338

0.0067799108748794

Position on chromosome:

17:65066886-65066892

Conserved species:

panTro2,rheMac2,dasNov2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	GCAAAAUUAUAACAAUUUUUUU________	3'
		______________________UCUUUGC_
		______________________\|\|\|.\|\|\|_
		______________________AGAGACG_
(miRNA)	3'	_____________________________U	5'

UTR3

9mer

5529-5547

0.0103211517718031

Position on chromosome:

17:65199507-65199525

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	GAGAAGAUGC__________A___________	3'
		__________CUUU_CGGGC___GUGCUUUGC
		__________\|\|.\|_\|.\|\|\|___\|\|\|\|\|\|\|\|\|
		__________GAGA_GUCCG___CACGAAACG
(miRNA)	3'	_________A____C_____GCA_________	5'

ENSG00000166974 (MAPRE2)

hsa-miR-330-3p

0.987411453842404

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

144-169

0.00825207297357474

Position on chromosome:

18:32720478-32720503

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,loxAfr3,monDom5,galGal3

Binding area:

(Transcript)	5'	CCA_____CUU__UU__CAUUUU______	3'
		___CUGCG___GG__CC______CUUUGC
		___\|\|\|\|.___\|\|__\|\|______\|\|\|\|\|\|
		___GACGU___CC__GG______GAAACG
(miRNA)	3'	__A______________CACAC_______	5'

UTR3

8mer

416-433

0.0569852416175151

Position on chromosome:

18:32720750-32720767

Conserved species:

panTro2,rheMac2,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	AGAUGUCACA__CAU____G________A	3'
		__________CA___UUGU_GUGCUUUG_
		__________\|\|___..\|\|_\|\|\|\|\|\|\|\|_
		__________GU___GGCA_CACGAAAC_
(miRNA)	3'	_________C__CC______________G	5'

UTR3

6mer

686-713

0.0056144389513149

Position on chromosome:

18:32721020-32721047

Conserved species:

panTro2,rheMac2,mm9,canFam2,dasNov2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	A___A_____AAAACA__AUCUCAA______	3'
		_CUC___AGG______CC_______CUUUGC
		_\|\|\|___\|\|\|______\|\|_______\|\|\|\|\|\|
		_GAG___UCC______GG_______GAAACG
(miRNA)	3'	A___ACG___________CACAC________	5'

UTR3

6mer

1469-1496

0.00372890840295099

Position on chromosome:

18:32721803-32721830

Conserved species:

panTro2,rheMac2,mm9,oryCun2,bosTau4,canFam2,dasNov2

Binding area:

(Transcript)	5'	______AAUUA___AUCCUGAA______A	3'
		UUUCUG_____UGU________GCUUUG_
		\|.\|\|\|\|_____.\|\|________\|\|\|\|\|\|_
		AGAGAC_____GCA________CGAAAC_
(miRNA)	3'	______GUCCG___CA____________G	5'

UTR3

7mer

2330-2352

0.00742231952349572

Position on chromosome:

18:32722664-32722686

Conserved species:

panTro2,rheMac2,mm9,canFam2,loxAfr3

Binding area:

(Transcript)	5'	CACCC___A_G___UCUCAGA_______G	3'
		_____CAG_U_GUG_______UGCUUUG_
		_____\|\|\|_._\|\|\|_______\|\|\|\|\|\|\|_
		_____GUC_G_CAC_______ACGAAAC_
(miRNA)	3'	____C___C_G_________________G	5'

ENSG00000172264 (MACROD2)

hsa-miR-330-3p

0.986418123937376

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

254-280

0.00477736530806117

Position on chromosome:

20:16030776-16030802

Conserved species:

panTro2,oryCun2,loxAfr3

Binding area:

(Transcript)	5'	AA_______CUUUUCUCUUACAA______	3'
		__UUUCUGU______________CUUUGC
		__\|.\|\|\|\|.______________\|\|\|\|\|\|
		__AGAGACG______________GAAACG
(miRNA)	3'	_________UCCGGCACAC__________	5'

UTR3

6mer

792-812

0.00208157485994885

Position on chromosome:

20:16031314-16031334

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	CUGCAUAA____AA___A__GCC_______	3'
		________CUGU__AGG_UG____CUUUGC
		________\|\|\|.__\|\|\|_.\|____\|\|\|\|\|\|
		________GACG__UCC_GC____GAAACG
(miRNA)	3'	_______A_________G__ACAC______	5'

UTR3

7mer

2271-2296

0.00801563430692953

Position on chromosome:

20:16032793-16032818

Conserved species:

panTro2,rn4,mm9,dasNov2

Binding area:

(Transcript)	5'	AU___A_____UUUUCAUUUU_______U	3'
		__UAG_UUGUG__________UGCUUUG_
		__.\|\|_..\|\|\|__________\|\|\|\|\|\|\|_
		__GUC_GGCAC__________ACGAAAC_
(miRNA)	3'	_C___C______________________G	5'

UTR3

7mer

2889-2917

0.0170078463535402

Position on chromosome:

20:16033411-16033439

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	________UGU___G_A___CG_______	3'
		UCUCUGUA___GGC_C_UGU__GCUUUGC
		\|\|\|\|\|\|.\|___\|\|\|_\|_\|\|\|__\|\|\|\|\|\|\|
		AGAGACGU___CCG_G_ACA__CGAAACG
(miRNA)	3'	________________C____________	5'

UTR3

7mer

2902-2921

0.048862805495551

Position on chromosome:

20:16033424-16033443

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	GUAUGUGG_____U____GCUU_______A	3'
		________C_GCA_GUCG____UGCUUUG_
		________\|_\|\|\|_\|.\|\|____\|\|\|\|\|\|\|_
		________G_CGU_CGGC____ACGAAAC_
(miRNA)	3'	_______A_A___C____AC_________G	5'

ENSG00000111816 (FRK)

hsa-miR-330-3p

0.986415668270817

Gene details
	loading...
miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

10820-10841

0.0360014877050614

Position on chromosome:

6:116263132-116263153

Conserved species:

panTro2,rheMac2,rn4,oryCun2,bosTau4,dasNov2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	GUUAUUA__A___AAUU__AU________	3'
		_______UG_AGG____UG__UGCUUUGC
		_______\|\|_\|\|\|____.\|__\|\|\|\|\|\|\|\|
		_______AC_UCC____GC__ACGAAACG
(miRNA)	3'	______G__G___G_____AC________	5'

UTR3

8mer

10797-10813

0.0370838444688504

Position on chromosome:

6:116263109-116263125

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	UUUGCUGCACA_____A____________A	3'
		___________GCAGG_CC_UGUGCUUUG_
		___________\|\|\|\|\|_\|\|_\|\|\|\|\|\|\|\|\|_
		___________CGUCC_GG_ACACGAAAC_
(miRNA)	3'	__________A________C_________G	5'

UTR3

6mer

8480-8500

0.00192808857128603

Position on chromosome:

6:116260792-116260812

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	CACAUUGA_______UC___AGA_______	3'
		________UUUUGUA__CUG____CUUUGC
		________.\|.\|\|.\|__\|.\|____\|\|\|\|\|\|
		________GAGACGU__GGC____GAAACG
(miRNA)	3'	_______A_______CC___ACAC______	5'

UTR3

6mer

7755-7768

0.00150424594410675

Position on chromosome:

6:116260067-116260080

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	AGUUUCAGAAAGAA___UA_UA________U	3'
		______________UAG__C____GCUUUG_
		______________.\|\|__\|____\|\|\|\|\|\|_
		______________GUC__G____CGAAAC_
(miRNA)	3'	_____________C___CG_CACA______G	5'

UTR3

6mer

6439-6462

0.001462220355944

Position on chromosome:

6:116258751-116258774

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	CUUUA___UG__C_______UCU______	3'
		_____UCU__AG_CUGUGUG___CUUUGC
		_____\|\|\|__\|\|_\|.\|\|\|\|\|___\|\|\|\|\|\|
		_____AGA__UC_GGCACAC___GAAACG
(miRNA)	3'	____G___CG__C________________	5'

UTR3

6mer

5649-5664

0.00139685855972634

Position on chromosome:

6:116257961-116257976

Conserved species:

panTro2

Binding area:

(Transcript)	5'	CAUAAUCCCAUA_____U____AG__________U	3'
		____________UUUCU___GG______GCUUUG_
		____________\|.\|\|\|___\|\|______\|\|\|\|\|\|_
		____________AGAGA___CC______CGAAAC_
(miRNA)	3'	_________________CGU__GGCACA______G	5'

UTR3

6mer

4571-4586

0.0013654852358077

Position on chromosome:

6:116256883-116256898

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	ACCCAAUUCGAA___C______A__________U	3'
		____________CUC__CAGGC_____GCUUUG_
		____________\|\|\|__\|\|\|\|\|_____\|\|\|\|\|\|_
		____________GAG__GUCCG_____CGAAAC_
(miRNA)	3'	___________A___AC_____GCACA______G	5'

ENSG00000152409 (JMY)

hsa-miR-330-3p

0.985382095221952

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

7mer

357-382

0.018501948672494

Position on chromosome:

5:78617783-78617808

Conserved species:

panTro2,rheMac2,canFam2,dasNov2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	UA______A_____AUUGGGAC_______A	3'
		__CUGU_G_GCUGU________UGCUUUG_
		__\|\|\|._\|_\|\|.\|\|________\|\|\|\|\|\|\|_
		__GACG_C_CGGCA________ACGAAAC_
(miRNA)	3'	_A____U_______C______________G	5'

UTR3

6mer

4058-4082

0.00211911644490029

Position on chromosome:

5:78621484-78621508

Conserved species:

panTro2,rheMac2,bosTau4,dasNov2

Binding area:

(Transcript)	5'	ACAA___A____UUAUU_____AA______	3'
		____UUC_GUAG_____UC_UG__CUUUGC
		____.\|\|_\|.\|\|_____.\|_\|\|__\|\|\|\|\|\|
		____GAG_CGUC_____GG_AC__GAAACG
(miRNA)	3'	___A___A____C______C__AC______	5'

UTR3

7mer

4120-4138

0.00408985973965641

Position on chromosome:

5:78621546-78621564

Conserved species:

bosTau4,canFam2,dasNov2,echTel1

Binding area:

(Transcript)	5'	UAAGAAGGG__A____UUAAU__________U	3'
		_________UC_CUGC________UGCUUUG_
		_________\|\|_\|\|\|\|________\|\|\|\|\|\|\|_
		_________AG_GACG________ACGAAAC_
(miRNA)	3'	___________A____UCCGGCAC_______G	5'

UTR3

6mer

5128-5151

0.0099397149717803

Position on chromosome:

5:78622554-78622577

Conserved species:

panTro2,rheMac2,mm9,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	AAAA___AUU______AUUUACUA______U	3'
		____CUC___CA__CC________GCUUUG_
		____\|\|\|___\|\|__\|\|________\|\|\|\|\|\|_
		____GAG___GU__GG________CGAAAC_
(miRNA)	3'	___A___AC___CC__CACA__________G	5'

UTR3

9mer

5182-5200

0.0100912601071522

Position on chromosome:

5:78622608-78622626

Conserved species:

panTro2

Binding area:

(Transcript)	5'	AAGCAAAACA__A______AU__________	3'
		__________CU_GCA__C__UGUGCUUUGC
		__________\|\|_\|\|\|__\|__\|\|\|\|\|\|\|\|\|\|
		__________GA_CGU__G__ACACGAAACG
(miRNA)	3'	_________A______CC_GC__________	5'

UTR3

7mer

5420-5446

0.034784693433528

Position on chromosome:

5:78622846-78622872

Conserved species:

panTro2,rheMac2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	U________UUGUAA____AU_______U	3'
		_UUUCUGCA______UUGU__UGCUUUG_
		_\|.\|\|\|\|\|\|______..\|\|__\|\|\|\|\|\|\|_
		_AGAGACGU______GGCA__ACGAAAC_
(miRNA)	3'	_________CC________C________G	5'

ENSG00000185716 (C16orf52)

hsa-miR-330-3p

0.98433464407842

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

7mer

131-155

0.0317902315769753

Position on chromosome:

16:22092333-22092357

Conserved species:

panTro2,rn4,mm9,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,galGal3

Binding area:

(Transcript)	5'	AUG___AGA___AAAAAAAAA_______G	3'
		___CUG___AGG_________UGCUUUG_
		___\|\|\|___\|\|\|_________\|\|\|\|\|\|\|_
		___GAC___UCC_________ACGAAAC_
(miRNA)	3'	__A___G_____GGCAC___________G	5'

UTR3

8mer

800-827

0.0339249126345407

Position on chromosome:

16:22093002-22093029

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,xenTro2

Binding area:

(Transcript)	5'	U______GA__AGAAUU___AA________	3'
		_UC_CUG__AG______CUG__UGCUUUGC
		_\|\|_\|\|\|__\|\|______\|.\|__\|\|\|\|\|\|\|\|
		_AG_GAC__UC______GGC__ACGAAACG
(miRNA)	3'	___A___G___C________AC________	5'

UTR3

6mer

2139-2156

0.00204107940090363

Position on chromosome:

16:22094341-22094358

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,dasNov2,loxAfr3

Binding area:

(Transcript)	5'	AAAUGGAUCA_____A___AAA_________G	3'
		__________CUUUG_AGG______GCUUUG_
		__________\|\|.\|\|_\|\|\|______\|\|\|\|\|\|_
		__________GAGAC_UCC______CGAAAC_
(miRNA)	3'	_________A_____G___GGCACA______G	5'

UTR3

6mer

3144-3161

0.00709848226383508

Position on chromosome:

16:22095346-22095363

Conserved species:

panTro2,rheMac2,rn4,mm9,canFam2,dasNov2,loxAfr3

Binding area:

(Transcript)	5'	GGUUUUUACC____U______UAAA______A	3'
		__________CUUU____GCC____GCUUUG_
		__________\|\|.\|____\|\|\|____\|\|\|\|\|\|_
		__________GAGA____CGG____CGAAAC_
(miRNA)	3'	_________A____CGUC___CACA______G	5'

UTR3

6mer

3272-3293

0.00352342970596218

Position on chromosome:

16:22095474-22095495

Conserved species:

panTro2,oryCun2

Binding area:

(Transcript)	5'	AAAAAUA___UA____GAAACUAA______	3'
		_______CAG__U_UG________CUUUGC
		_______\|\|\|__._\|\|________\|\|\|\|\|\|
		_______GUC__G_AC________GAAACG
(miRNA)	3'	______C___CG_C__AC____________	5'

ENSG00000088179 (PTPN4)

hsa-miR-330-3p

0.984132000337647

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

191-214

0.0413142588081781

Position on chromosome:

2:120734838-120734861

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,canFam2,dasNov2,loxAfr3,echTel1,galGal3

Binding area:

(Transcript)	5'	AUGUA____A__A____UUCA________	3'
		_____UUUG_AG_CUGU____UGCUUUGC
		_____\|.\|\|_\|\|_\|.\|\|____\|\|\|\|\|\|\|\|
		_____AGAC_UC_GGCA____ACGAAACG
(miRNA)	3'	____G____G__C____C___________	5'

UTR3

6mer

1233-1258

0.00350960563515016

Position on chromosome:

2:120735880-120735905

Conserved species:

panTro2,rheMac2,bosTau4,dasNov2,loxAfr3

Binding area:

(Transcript)	5'	CA___AUUU___UUAAUAUCAA______U	3'
		__CUC____CAG__________GCUUUG_
		__\|\|\|____\|\|\|__________\|\|\|\|\|\|_
		__GAG____GUC__________CGAAAC_
(miRNA)	3'	_A___AC_____CGGCACA_________G	5'

UTR3

7mer

4194-4210

0.00363137491693966

Position on chromosome:

2:120738841-120738857

Conserved species:

panTro2

Binding area:

(Transcript)	5'	UAGAUAAAUUA____ACA_____________A	3'
		___________UGCA___GCC___UGCUUUG_
		___________\|\|\|\|___\|\|\|___\|\|\|\|\|\|\|_
		___________ACGU___CGG___ACGAAAC_
(miRNA)	3'	__________G____C_____CAC_______G	5'

UTR3

8mer

5458-5478

0.00884274314155473

Position on chromosome:

2:120740105-120740125

Conserved species:

panTro2

Binding area:

(Transcript)	5'	AAUGUACA____UUUU__AU_U________	3'
		________UUCU_____C__U_UGCUUUGC
		________.\|\|\|_____\|__\|_\|\|\|\|\|\|\|\|
		________GAGA_____G__A_ACGAAACG
(miRNA)	3'	_______A____CGUCC_GC_C________	5'

UTR3

6mer

5613-5634

0.00221891750776656

Position on chromosome:

2:120740260-120740281

Conserved species:

panTro2,rheMac2,mm9,loxAfr3,echTel1

Binding area:

(Transcript)	5'	UUACCA___AGAA___UGCCAG______U	3'
		______UAG____CGU______GCUUUG_
		______.\|\|____\|\|\|______\|\|\|\|\|\|_
		______GUC____GCA______CGAAAC_
(miRNA)	3'	_____C___CG_____CA__________G	5'

UTR3

6mer

6048-6069

0.00327501249332722

Position on chromosome:

2:120740695-120740716

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	AAAGUGA_____U_UU___A__AA______	3'
		_______UCUCU_C___UC_UG__CUUUGC
		_______\|\|\|\|\|_\|___.\|_\|\|__\|\|\|\|\|\|
		_______AGAGA_G___GG_AC__GAAACG
(miRNA)	3'	____________C_UCC__C__AC______	5'

UTR3

7mer

6665-6689

0.0153727919096626

Position on chromosome:

2:120741312-120741336

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,dasNov2,echTel1

Binding area:

(Transcript)	5'	AAGA___AC______GAUCUUA_______	3'
		____GCA__UUGUGU_______GCUUUGC
		____\|\|\|__..\|\|\|\|_______\|\|\|\|\|\|\|
		____CGU__GGCACA_______CGAAACG
(miRNA)	3'	___A___CC____________________	5'

ENSG00000134109 (EDEM1)

hsa-miR-330-3p

0.983759532288756

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

322-335

0.00490637479943989

Position on chromosome:

3:5257926-5257939

Conserved species:

rheMac2,mm9,loxAfr3

Binding area:

(Transcript)	5'	ACUUCAGAACCUAAG_____U_________________	3'
		_______________UCUCU_CA_________CUUUGC
		_______________\|\|\|\|\|_\|\|_________\|\|\|\|\|\|
		_______________AGAGA_GU_________GAAACG
(miRNA)	3'	____________________C__CCGGCACAC______	5'

UTR3

6mer

2081-2101

0.000828964613964271

Position on chromosome:

3:5259685-5259705

Conserved species:

panTro2

Binding area:

(Transcript)	5'	UCCAGUGU_____UAAUG____A___________	3'
		________UCUCU_____AGGC______CUUUGC
		________\|\|\|\|\|_____\|\|\|\|______\|\|\|\|\|\|
		________AGAGA_____UCCG______GAAACG
(miRNA)	3'	_____________CG_______GCACAC______	5'

UTR3

8mer

2558-2574

0.00575799477411875

Position on chromosome:

3:5260162-5260178

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	GGAGGAGAUUAC___A_AA___________	3'
		____________CAG_G__GU_UGCUUUGC
		________