DIANA TOOLS - MicroT-CDS

Filters

Advanced options:

Threshold:

Results: 1004 targets for miRNAs hsa-miR-197-3p

. Threshold is set to 0.7.

Name:	hsa-miR-197-3p
Alternative description:	MIMAT0000227
Related names:
miRNA sequence:	uucaccaccuucuccacccagc
External links:	miRBase
DIANA resources:	microT-CDS
Related diseases:	Acute Disease Adenocarcinoma Adenocarcinoma, Follicular Adenoma Alzheimer Disease Anemia, Sickle Cell Breast Neoplasms, Male Carcinoma, Non-Small-Cell Lung Carcinoma, Pancreatic Ductal Carcinoma, Papillary Carcinoma, Squamous Cell Cell Transformation, Neoplastic Dermatitis, Atopic Fatty Liver Genetic Predisposition to Disease Glioblastoma Head and Neck Neoplasms Hematologic Neoplasms Huntington Disease Leiomyoma Lung Neoplasms Lupus Nephritis Mouth Neoplasms Muscular Dystrophies Obesity Pancreatic Neoplasms Pancreatitis, Chronic Pituitary Neoplasms Psoriasis Pulmonary Embolism Small Cell Lung Carcinoma Thyroid Neoplasms Uterine Cervical Neoplasms Uterine Neoplasms

Ensembl Gene Id

miRNA name

miTG score

Also Predicted

ENSG00000198561 (CTNND1)

hsa-miR-197-3p

0.999920547973456

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

9mer

35-55

0.172123710227627

Position on chromosome:

11:57583816-57583836

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,echTel1,monDom5

Binding area:

(Transcript)	5'	UAUAUGUA__UUUAUUUUUU_________	3'
		________CU__________GGUGGUGAA
		________\|\|__________\|\|\|\|\|\|\|\|\|
		________GA__________CCACCACUU
(miRNA)	3'	_______C__CCCACCUCUU_________	5'

UTR3

9mer

2151-2164

0.0122906502261523

Position on chromosome:

11:57575940-57575953

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	CUGACUAAUGAACAU__AC__________	3'
		_______________GA__GGGUGGUGAA
		_______________\|\|__.\|\|\|\|\|\|\|\|\|
		_______________CU__UCCACCACUU
(miRNA)	3'	______________C__CU__________	5'

ENSG00000064393 (HIPK2)

hsa-miR-197-3p

0.999919518558569

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

7mer

6955-6983

0.00157801294069813

Position on chromosome:

7:139253271-139253299

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	________U_UUUAACUGGAGCC_______	3'
		_GGAGGAG_G_____________UGGUGAA
		_\|\|\|\|.\|\|_\|_____________\|\|\|\|\|\|\|
		_CCUCUUC_C_____________ACCACUU
(miRNA)	3'	A_____________________________	5'

UTR3

6mer

5987-6002

0.00154268011966615

Position on chromosome:

7:139252303-139252318

Conserved species:

panTro2,rheMac2,oryCun2,dasNov2

Binding area:

(Transcript)	5'	GUCCUUACCAAAU_________AA______	3'
		_____________UGGA_AAGG__GGUGAA
		_____________\|\|\|\|_\|\|\|\|__\|\|\|\|\|\|
		_____________ACCU_UUCC__CCACUU
(miRNA)	3'	____________C____C____A_______	5'

UTR3

6mer

3934-3952

0.00148680128641391

Position on chromosome:

7:139250250-139250268

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	CAUUUUUAUU___AU__A_____A_______	3'
		__________UUG__UG___AAG_UGGUGAG
		__________.\|\|__\|\|___\|\|\|_\|\|\|\|\|\|.
		__________GAC__AC___UUC_ACCACUU
(miRNA)	3'	_________C___CC__CUC___C_______	5'

UTR3

8mer

169-193

0.147843596729862

Position on chromosome:

7:139246485-139246509

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,fr2,danRer6

Binding area:

(Transcript)	5'	AAAA___________UCCCAUU________	3'
		____GGG_GGGGGGG_______GUGGUGAA
		____\|\|\|_\|\|.\|..\|_______\|\|\|\|\|\|\|\|
		____CCC_CCUCUUC_______CACCACUU
(miRNA)	3'	___A___A______________________	5'

UTR3

6mer

108-122

0.0123356964850923

Position on chromosome:

7:139246424-139246438

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,tetNig2,fr2,danRer6

Binding area:

(Transcript)	5'	UUGAUCAUUUUUUC__UCUCCGA______	3'
		______________GG_______GGUGAA
		______________\|\|_______\|\|\|\|\|\|
		______________CC_______CCACUU
(miRNA)	3'	_____________A__UCUUCCA______	5'

ENSG00000162650 (ATXN7L2)

hsa-miR-197-3p

0.999794519944373

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

120-137

0.0643053470183634

Position on chromosome:

1:110029189-110029206

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,monDom5,danRer6

Binding area:

(Transcript)	5'	GUGUGUAACCA___CAGCCAA___________	3'
		___________CUG__________GUGGUGAA
		___________\|\|\|__________\|\|\|\|\|\|\|\|
		___________GAC__________CACCACUU
(miRNA)	3'	__________C___CCACCUCUUC________	5'

UTR3

8mer

372-395

0.074497754282953

Position on chromosome:

1:110029837;110030140-110029839;110030160

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	AACCU___CCUUUUC___CCU___________	3'
		_____CUG_______GUG______GUGGUGAA
		_____\|\|\|_______\|\|\|______\|\|\|\|\|\|\|\|
		_____GAC_______CAC______CACCACUU
(miRNA)	3'	____C___C_________CUCUUC________	5'

UTR3

8mer

1025-1052

0.00882887941859226

Position on chromosome:

1:110032578-110032605

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,canFam2,dasNov2,loxAfr3

Binding area:

(Transcript)	5'	____A__AUGA___CCCCUGU________U	3'
		_UGG_UG____AGG_______GGUGGUGA_
		_\|\|\|_\|\|____\|\|._______\|\|\|\|\|\|\|\|_
		_ACC_AC____UCU_______CCACCACU_
(miRNA)	3'	G___C__C______U______________U	5'

UTR3

6mer

1200-1226

0.0018332138659025

Position on chromosome:

1:110032895-110032921

Conserved species:

panTro2,rheMac2,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	UU___CACCUUUG____CC__C_______	3'
		__CUG________GGAG__GG_UGGUGAG
		__\|\|\|________\|\|\|\|__\|\|_\|\|\|\|\|\|.
		__GAC________CCUC__CC_ACCACUU
(miRNA)	3'	_C___CCA_________UU__________	5'

ENSG00000047346 (FAM214A)

hsa-miR-197-3p

0.9997793105695

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

1155-1167

0.148297866246072

Position on chromosome:

15:52877110-52877122

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2,tetNig2,fr2,danRer6

Binding area:

(Transcript)	5'	UUAUUUAAUCCUAAUA___CU________	3'
		________________AGA__GUGGUGAA
		________________\|\|\|__\|\|\|\|\|\|\|\|
		________________UCU__CACCACUU
(miRNA)	3'	_______________C___UC________	5'

ENSG00000257529 (RPL36A-HNRNPH2)

hsa-miR-197-3p

0.999599415723489

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

15-36

0.0624802828745826

Position on chromosome:

X:100666996-100667017

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,xenTro2

Binding area:

(Transcript)	5'	ACGGAAG__A___A____UUC________	3'
		_______GC_GGG_GGGG___GUGGUGAA
		_______\|\|_\|\|\|_\|\|.\|___\|\|\|\|\|\|\|\|
		_______CG_CCC_CCUC___CACCACUU
(miRNA)	3'	_________A___A____UUC________	5'

UTR3

8mer

141-163

0.0760709063899833

Position on chromosome:

X:100667122-100667144

Conserved species:

panTro2,rheMac2,rn4,mm9,bosTau4,canFam2,dasNov2,echTel1,danRer6

Binding area:

(Transcript)	5'	ACACCA______GCAGACCAA________	3'
		______GAGAAG_________GUGGUGAA
		______\|\|\|\|\|\|_________\|\|\|\|\|\|\|\|
		______CUCUUC_________CACCACUU
(miRNA)	3'	_____C_______________________	5'

ENSG00000100321 (SYNGR1)

hsa-miR-197-3p

0.999051798225778

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

299-316

0.012804121026336

Position on chromosome:

22:39778219-39778236

Conserved species:

panTro2,loxAfr3

Binding area:

(Transcript)	5'	UCCGGCCUGU______CAU____________C	3'
		__________GCUGGG______GGGUGGUGA_
		__________\|\|\|\|\|\|______.\|\|\|\|\|\|\|\|_
		__________CGACCC______UCCACCACU_
(miRNA)	3'	________________ACCUCU_________U	5'

UTR3

6mer

2329-2354

0.00125752594553859

Position on chromosome:

22:39780249-39780274

Conserved species:

panTro2,rheMac2,bosTau4

Binding area:

(Transcript)	5'	UC__C_____CCAGCC__CU_C______U	3'
		__CU_GGGUG______AG__G_UGGUGA_
		__\|\|_\|\|\|\|\|______\|\|__\|_\|\|\|\|\|\|_
		__GA_CCCAC______UC__C_ACCACU_
(miRNA)	3'	_C________C_______UU_C______U	5'

UTR3

6mer

3118-3123

0.00333331223213691

Position on chromosome:

22:39781038-39781043

Conserved species:

panTro2,oryCun2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	AGUUCCCUACUCCAUCCUUCCC______U	3'
		______________________UGGUGA_
		______________________\|\|\|\|\|\|_
		______________________ACCACU_
(miRNA)	3'	_____________________C______U	5'

UTR3

6mer

3465-3487

0.00417067143460682

Position on chromosome:

22:39781385-39781407

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,loxAfr3

Binding area:

(Transcript)	5'	UGUGUG__U___C_U_UGU_U_C______	3'
		______UG_GUG_G_G___G_G_GGUGAA
		______\|\|_\|\|\|_\|_\|___\|_\|_\|\|\|\|\|\|
		______AC_CAC_C_C___C_C_CCACUU
(miRNA)	3'	_____G__C_____U_UU____A______	5'

UTR3

8mer

3596-3603

0.0339736207035393

Position on chromosome:

22:39781516-39781523

Conserved species:

panTro2,rheMac2,bosTau4,canFam2,loxAfr3

Binding area:

(Transcript)	5'	CUUUAUGACAUCCAUCCAUCU________	3'
		_____________________GUGGUGAA
		_____________________\|\|\|\|\|\|\|\|
		_____________________CACCACUU
(miRNA)	3'	____________________C________	5'

UTR3

8mer

3594-3620

0.0581176362881472

Position on chromosome:

22:39781514-39781540

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	U___U____AACCAAGU___________C	3'
		_CUG_GGUG________GAAGGUGGUGA_
		_\|\|\|_\|\|\|\|________\|\|\|\|\|\|\|\|\|\|\|_
		_GAC_CCAC________CUUCCACCACU_
(miRNA)	3'	C________CU_________________U	5'

UTR3

6mer

3613-3630

0.0108026928784989

Position on chromosome:

22:39781533-39781550

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	ACCAAGUGAA_____U__CUUC______C	3'
		__________GGUGG_GA____UGGUGA_
		__________\|\|\|\|\|_\|\|____\|\|\|\|\|\|_
		__________CCACC_CU____ACCACU_
(miRNA)	3'	_________C_____U__UCC_______U	5'

ENSG00000087095 (NLK)

hsa-miR-197-3p

0.998714153428816

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

565-590

0.00457341978495548

Position on chromosome:

17:26522228-26522253

Conserved species:

panTro2,rheMac2,rn4,oryCun2,dasNov2,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	UA___UCUCAUUA___CCGU_A______U	3'
		__GCU________GAG____G_UGGUGA_
		__\|\|\|________\|\|\|____\|_\|\|\|\|\|\|_
		__CGA________CUC____C_ACCACU_
(miRNA)	3'	_____CCCAC______UU___C______U	5'

UTR3

8mer

1695-1719

0.114902182837954

Position on chromosome:

17:26523358-26523382

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2,danRer6

Binding area:

(Transcript)	5'	ACAA__UAGAUUU____UACA________	3'
		____UG_______GAAG____GUGGUGAA
		____\|\|_______\|\|\|\|____\|\|\|\|\|\|\|\|
		____AC_______CUUC____CACCACUU
(miRNA)	3'	___G__CCACCU_________________	5'

ENSG00000197283 (SYNGAP1)

hsa-miR-197-3p

0.998514138408665

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

1725-1741

0.117109361817995

Position on chromosome:

6:33421409-33421425

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	UUUCCUUUUUUU____A___U_____________	3'
		____________CUGG_GUG______GUGGUGAA
		____________\|\|\|\|_\|\|\|______\|\|\|\|\|\|\|\|
		____________GACC_CAC______CACCACUU
(miRNA)	3'	___________C________CUCUUC________	5'

ENSG00000086712 (TXLNG)

hsa-miR-197-3p

0.998057958751202

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

64-82

0.112725885474561

Position on chromosome:

X:16859954-16859972

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	UAGUAGUUAA__AU____UUUU_________	3'
		__________CU___UGG_____GUGGUGAA
		__________\|\|___\|\|\|_____\|\|\|\|\|\|\|\|
		__________GA___ACC_____CACCACUU
(miRNA)	3'	_________C__CCC___UCUUC________	5'

ENSG00000090905 (TNRC6A)

hsa-miR-197-3p

0.997911436403379

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

9mer

338-361

0.0851720428201552

Position on chromosome:

16:24800777-24800800

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,dasNov2,echTel1,galGal3,danRer6

Binding area:

(Transcript)	5'	UCAUG___UCA___AACAC___________	3'
		_____GCU___GGG______AGGUGGUGAA
		_____\|\|\|___\|\|\|______\|\|\|\|\|\|\|\|\|\|
		_____CGA___CCC______UCCACCACUU
(miRNA)	3'	______________ACCUCU__________	5'

UTR3

6mer

1138-1155

0.00596296422490167

Position on chromosome:

16:24801577-24801594

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2

Binding area:

(Transcript)	5'	CAGGCCCUAA___CC___CUAA______C	3'
		__________UGG__AAG____UGGUGA_
		__________\|\|\|__\|\|\|____\|\|\|\|\|\|_
		__________ACC__UUC____ACCACU_
(miRNA)	3'	_________C___UC___C_________U	5'

UTR3

7mer

2896-2910

0.0064890194139523

Position on chromosome:

16:24805884-24805898

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,xenTro2

Binding area:

(Transcript)	5'	AAUCUAUGCAAGA___C___U___________U	3'
		_____________UGG_UGG_____GUGGUGA_
		_____________\|\|\|_\|\|\|_____\|\|\|\|\|\|\|_
		_____________ACC_ACC_____CACCACU_
(miRNA)	3'	____________G___C___UCUUC_______U	5'

UTR3

6mer

3268-3273

0.00419734424953635

Position on chromosome:

16:24815547-24815552

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,echTel1

Binding area:

(Transcript)	5'	UAGAUAAACAUAGCCUAAAUAU______U	3'
		______________________UGGUGA_
		______________________\|\|\|\|\|\|_
		______________________ACCACU_
(miRNA)	3'	_____________________C______U	5'

UTR3

7mer

3918-3924

0.00831168509350412

Position on chromosome:

16:24817959-24817965

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	CGUCAACUUGAUCCAAACCUGU_______	3'
		______________________UGGUGAA
		______________________\|\|\|\|\|\|\|
		______________________ACCACUU
(miRNA)	3'	_____________________C_______	5'

UTR3

6mer

4345-4372

0.0014016210902158

Position on chromosome:

16:24826616;24828137-24826626;24828153

Conserved species:

panTro2,rheMac2,galGal3,danRer6

Binding area:

(Transcript)	5'	A____CCACC____UUUCGUCC_______	3'
		_UUGG_____AGAA________UGGUGAG
		_.\|\|\|_____\|\|\|\|________\|\|\|\|\|\|.
		_GACC_____UCUU________ACCACUU
(miRNA)	3'	C____CACC_____CC_____________	5'

ENSG00000145730 (PAM)

hsa-miR-197-3p

0.997860141378255

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

47-63

0.0786523546344096

Position on chromosome:

5:102284140;102285241-102284149;102285247

Conserved species:

panTro2,rheMac2,bosTau4,canFam2,dasNov2,loxAfr3

Binding area:

(Transcript)	5'	GUUAUCCCAGCA______AAA________	3'
		____________GGAGAA___GUGGUGAA
		____________\|\|\|\|\|\|___\|\|\|\|\|\|\|\|
		____________CCUCUU___CACCACUU
(miRNA)	3'	___________A______C__________	5'

UTR3

6mer

239-258

0.00836756576889326

Position on chromosome:

5:102286445-102286464

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,echTel1,monDom5,fr2

Binding area:

(Transcript)	5'	GGCAUCCA____A___U_____UUU______C	3'
		________GUUG__UG___AAG___UGGUGA_
		________\|.\|\|__\|\|___\|\|\|___\|\|\|\|\|\|_
		________CGAC__AC___UUC___ACCACU_
(miRNA)	3'	____________CC__CUC___C________U	5'

UTR3

7mer

266-292

0.011593387917745

Position on chromosome:

5:102286472-102286498

Conserved species:

panTro2,rheMac2,rn4,canFam2,monDom5,galGal3

Binding area:

(Transcript)	5'	UG____CAAGAU___UAUUCAC_______	3'
		__GCUG______GUG_______UGGUGAA
		__\|\|\|\|______\|\|\|_______\|\|\|\|\|\|\|
		__CGAC______CAC_______ACCACUU
(miRNA)	3'	______C________CUCUUCC_______	5'

UTR3

7mer

862-868

0.00926180282637525

Position on chromosome:

5:102310106-102310112

Conserved species:

panTro2,rheMac2,mm9,bosTau4,dasNov2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	UCUCAUUACAGCAGCCCCCACC_______	3'
		______________________UGGUGAA
		______________________\|\|\|\|\|\|\|
		______________________ACCACUU
(miRNA)	3'	_____________________C_______	5'

UTR3

6mer

978-992

0.00326216896672101

Position on chromosome:

5:102326057-102326071

Conserved species:

panTro2,rheMac2,oryCun2,canFam2,loxAfr3

Binding area:

(Transcript)	5'	GCUCUAGACCCUA____UAACC______U	3'
		_____________AGAA_____UGGUGA_
		_____________\|\|\|\|_____\|\|\|\|\|\|_
		_____________UCUU_____ACCACU_
(miRNA)	3'	____________C____CC_________U	5'

ENSG00000205323 (SARNP)

hsa-miR-197-3p

0.997819941085615

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

748-772

0.110832425790241

Position on chromosome:

12:56189837-56189861

Conserved species:

panTro2,rheMac2,tetNig2

Binding area:

(Transcript)	5'	GAUG___CAGCA______AAA________	3'
		____UGG_____GAGAAG___GUGGUGAA
		____\|\|\|_____\|\|\|\|\|\|___\|\|\|\|\|\|\|\|
		____ACC_____CUCUUC___CACCACUU
(miRNA)	3'	___G___CAC___________________	5'

ENSG00000169410 (PTPN9)

hsa-miR-197-3p

0.9971447690625

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

1472-1493

0.0960163868272439

Position on chromosome:

15:75760934-75760955

Conserved species:

panTro2,rheMac2,rn4,mm9,bosTau4,canFam2

Binding area:

(Transcript)	5'	UUUCCCU____CU_____UAAAU________	3'
		_______UUGG____AGA_____GUGGUGAA
		_______.\|\|\|____\|\|\|_____\|\|\|\|\|\|\|\|
		_______GACC____UCU_____CACCACUU
(miRNA)	3'	______C____CACC___UC___________	5'

UTR3

7mer

782-793

0.0103953649217075

Position on chromosome:

15:75760244-75760255

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2

Binding area:

(Transcript)	5'	GAGCCAAGAAUGUAUU__UUU_______C	3'
		________________AG___GUGGUGA_
		________________\|\|___\|\|\|\|\|\|\|_
		________________UC___CACCACU_
(miRNA)	3'	_______________C__UUC_______U	5'

ENSG00000268211 (AL359091.2)

hsa-miR-197-3p

0.996909239183816

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

7mer

83-99

0.0532754150170712

Position on chromosome:

9:131063702-131063718

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UUCGAGAUCAGC____CCAACA___________	3'
		____________CUGG__________UGGUGAA
		____________\|\|\|\|__________\|\|\|\|\|\|\|
		____________GACC__________ACCACUU
(miRNA)	3'	___________C____CACCUCUUCC_______	5'

UTR3

7mer

400-416

0.0518369799153186

Position on chromosome:

9:131064019-131064035

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UUCAAGACCAGC____CCAACA___________	3'
		____________CUGG__________UGGUGAA
		____________\|\|\|\|__________\|\|\|\|\|\|\|
		____________GACC__________ACCACUU
(miRNA)	3'	___________C____CACCUCUUCC_______	5'

ENSG00000071243 (ING3)

hsa-miR-197-3p

0.996689277036256

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

9mer

2259-2284

0.0957435444018357

Position on chromosome:

7:120617158-120617183

Conserved species:

panTro2,rheMac2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	AUG_____UCAC__UUCAC__________	3'
		___UGGGU____AG_____AGGUGGUGAA
		___\|\|\|\|\|____\|\|_____\|\|\|\|\|\|\|\|\|\|
		___ACCCA____UC_____UCCACCACUU
(miRNA)	3'	__G_____CC____U______________	5'

UTR3

6mer

2327-2332

0.00824160875176148

Position on chromosome:

7:120617226-120617231

Conserved species:

panTro2,rheMac2,bosTau4,canFam2,dasNov2,echTel1

Binding area:

(Transcript)	5'	GGAGUGUAUAUCAAAAUGUUCA______C	3'
		______________________UGGUGA_
		______________________\|\|\|\|\|\|_
		______________________ACCACU_
(miRNA)	3'	_____________________C______U	5'

ENSG00000106258 (CYP3A5)

hsa-miR-197-3p

0.9966499499923

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

2226-2243

0.00428800448430628

Position on chromosome:

7:99264272-99264289

Conserved species:

panTro2,rheMac2,mm9,bosTau4,canFam2

Binding area:

(Transcript)	5'	AUUGCCCAGUA______UGUAU_______	3'
		___________UGGAGA_____UGGUGAG
		___________\|\|\|\|\|\|_____\|\|\|\|\|\|.
		___________ACCUCU_____ACCACUU
(miRNA)	3'	__________C______UCC_________	5'

UTR3

6mer

955-960

0.00291279709276179

Position on chromosome:

7:99260645-99260650

Conserved species:

panTro2,rheMac2,oryCun2,loxAfr3

Binding area:

(Transcript)	5'	UUAGAUGAAUGUUUUUGUUCAC______C	3'
		______________________UGGUGA_
		______________________\|\|\|\|\|\|_
		______________________ACCACU_
(miRNA)	3'	_____________________C______U	5'

UTR3

9mer

532-556

0.0821352272908214

Position on chromosome:

7:99250347-99250371

Conserved species:

panTro2,rheMac2,mm9,oryCun2,bosTau4,loxAfr3,echTel1,tetNig2,fr2

Binding area:

(Transcript)	5'	CAGA_____UACCUUGACAU_________	3'
		____UGGAG___________GGUGGUGAA
		____\|\|\|\|\|___________\|\|\|\|\|\|\|\|\|
		____ACCUC___________CCACCACUU
(miRNA)	3'	___C_____UU__________________	5'

UTR3

8mer

428-443

0.0144554787437444

Position on chromosome:

7:99250243-99250258

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UUCAUUCCCAAA____CAAU__________U	3'
		____________GGGU______GGUGGUGA_
		____________\|\|\|\|______\|\|\|\|\|\|\|\|_
		____________CCCA______CCACCACU_
(miRNA)	3'	___________A____CCUCUU________U	5'

ENSG00000120705 (ETF1)

hsa-miR-197-3p

0.996577379736061

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

7mer

1926-1936

0.0215804698600422

Position on chromosome:

5:137843710-137843720

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	CCCAGUUUUUACUUUUAC________________	3'
		__________________UGGA_____UGGUGAA
		__________________\|\|\|\|_____\|\|\|\|\|\|\|
		__________________ACCU_____ACCACUU
(miRNA)	3'	_________________C____CUUCC_______	5'

UTR3

8mer

1701-1728

0.0819851458519104

Position on chromosome:

5:137843485-137843512

Conserved species:

panTro2,rheMac2,rn4,oryCun2,bosTau4,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	A___C__A______AAAUAUAU________	3'
		_CUG_GU__AGAAG________GUGGUGAA
		_\|\|\|_\|\|__\|\|\|\|\|________\|\|\|\|\|\|\|\|
		_GAC_CA__UCUUC________CACCACUU
(miRNA)	3'	C___C__CC_____________________	5'

UTR3

8mer

928-947

0.0107793664052008

Position on chromosome:

5:137842712-137842731

Conserved species:

panTro2,rheMac2,rn4,mm9,bosTau4,canFam2

Binding area:

(Transcript)	5'	CAAGGUCA___C___CCC__________C	3'
		________UGG_GUG___AGGGUGGUGA_
		________\|\|\|_\|\|\|___\|.\|\|\|\|\|\|\|\|_
		________ACC_CAC___UUCCACCACU_
(miRNA)	3'	_______G_______CUC__________U	5'

UTR3

9mer

531-554

0.0403718033853044

Position on chromosome:

5:137847243-137847266

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	AAUUA____AUAUAUCCUAU_________	3'
		_____GUUG___________GGUGGUGAA
		_____\|.\|\|___________\|\|\|\|\|\|\|\|\|
		_____CGAC___________CCACCACUU
(miRNA)	3'	_________CCACCUCUU___________	5'

ENSG00000188211 (NCR3LG1)

hsa-miR-197-3p

0.996084226356473

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

3755-3772

0.0378038105869519

Position on chromosome:

11:17397815-17397832

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	CCAACAGAAAA__CCUCU___________	3'
		___________GG_____GAGGUGGUGAG
		___________\|\|_____.\|\|\|\|\|\|\|\|\|.
		___________CC_____UUCCACCACUU
(miRNA)	3'	__________C__ACCUC___________	5'

UTR3

7mer

4766-4787

0.0634281456695667

Position on chromosome:

11:17398826-17398847

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UUCAAGA__A_CC____C__UA_______	3'
		_______CU_G__UGGA_AA__UGGUGAA
		_______\|\|_\|__\|\|\|\|_\|\|__\|\|\|\|\|\|\|
		_______GA_C__ACCU_UU__ACCACUU
(miRNA)	3'	______C____CC____C__CC_______	5'

ENSG00000121210 (KIAA0922)

hsa-miR-197-3p

0.996078975742207

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

98-119

0.101209969375192

Position on chromosome:

4:154476989-154477010

Conserved species:

panTro2,rheMac2,rn4,mm9,canFam2,dasNov2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	CCUAGUA___ACA_C____UU________	3'
		_______GGG___G_GAGG__GUGGUGAA
		_______\|\|\|___\|_\|\|\|.__\|\|\|\|\|\|\|\|
		_______CCC___C_CUCU__CACCACUU
(miRNA)	3'	______A___A________UC________	5'

ENSG00000188186 (LAMTOR4)

hsa-miR-197-3p

0.995550078275348

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

144-166

0.00996546899178136

Position on chromosome:

7:99751497-99751519

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,canFam2,dasNov2,loxAfr3,monDom5

Binding area:

(Transcript)	5'	GUCUU_______CACACACU_C______C	3'
		_____UGGAGAA________G_UGGUGA_
		_____\|\|\|\|\|\|\|________\|_\|\|\|\|\|\|_
		_____ACCUCUU________C_ACCACU_
(miRNA)	3'	____C________________C______U	5'

UTR3

8mer

182-197

0.0891677610177314

Position on chromosome:

7:99751535-99751550

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	GUGUCAGGACAGA_____UUU___________	3'
		_____________GGGUG______GUGGUGAA
		_____________\|\|\|\|\|______\|\|\|\|\|\|\|\|
		_____________CCCAC______CACCACUU
(miRNA)	3'	____________A_____CUCUUC________	5'

ENSG00000268759 (AC135983.2)

hsa-miR-197-3p

0.995514107553281

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

2082-2104

0.00969657525769729

Position on chromosome:

15:32779525-32779547

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	CGUGCA____CCGCCCU___UUAG______	3'
		______GCUG________AG____GGUGAA
		______\|\|\|\|________\|\|____\|\|\|\|\|\|
		______CGAC________UC____CCACUU
(miRNA)	3'	__________CCACCUCU__CA________	5'

UTR3

8mer

2653-2668

0.0893044798135104

Position on chromosome:

15:32780096-32780111

Conserved species:

panTro2

Binding area:

(Transcript)	5'	CUCGAGACCAGCC____A__U________	3'
		_____________UGGA_AA_GUGGUGAA
		_____________\|\|\|\|_\|\|_\|\|\|\|\|\|\|\|
		_____________ACCU_UU_CACCACUU
(miRNA)	3'	____________C____C__C________	5'

ENSG00000067369 (TP53BP1)

hsa-miR-197-3p

0.995123275526018

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

7mer

3046-3068

0.0224978691722173

Position on chromosome:

15:43733765;43738585-43733781;43738590

Conserved species:

panTro2,rheMac2,bosTau4,canFam2,dasNov2,loxAfr3,monDom5

Binding area:

(Transcript)	5'	UCAACC____A___CCUGCAAC_______	3'
		______UGGA_AAG________UGGUGAA
		______\|\|\|\|_\|\|\|________\|\|\|\|\|\|\|
		______ACCU_UUC________ACCACUU
(miRNA)	3'	_____C____C___C______________	5'

UTR3

6mer

2724-2739

0.00262185137445557

Position on chromosome:

15:43724688-43724703

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UCCAGUCCUCAA_______CAA______C	3'
		____________GGAGAGG___UGGUGA_
		____________\|\|\|\|\|.\|___\|\|\|\|\|\|_
		____________CCUCUUC___ACCACU_
(miRNA)	3'	___________A_______C________U	5'

UTR3

7mer

2476-2495

0.0105388222186367

Position on chromosome:

15:43724440-43724459

Conserved species:

panTro2,rheMac2,oryCun2,dasNov2,loxAfr3

Binding area:

(Transcript)	5'	CAGUUCAGA___A_A_______________	3'
		_________CUG_G_GGGGGA_GUGGUGAG
		_________\|\|\|_\|_\|\|.\|.\|_\|\|\|\|\|\|\|.
		_________GAC_C_CCUCUU_CACCACUU
(miRNA)	3'	________C___C_A______C________	5'

UTR3

6mer

1949-1968

0.00135878456202152

Position on chromosome:

15:43713319-43713338

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,echTel1,monDom5

Binding area:

(Transcript)	5'	GGACGCCA_U___U_______A______U	3'
		________G_GUG_GAGGAGG_UGGUGA_
		________\|_\|\|\|_\|\|\|.\|\|\|_\|\|\|\|\|\|_
		________C_CAC_CUCUUCC_ACCACU_
(miRNA)	3'	_______A_C__________________U	5'

UTR3

8mer

1412-1427

0.0280842813810536

Position on chromosome:

15:43708605;43712503-43708614;43712508

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,canFam2,dasNov2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	GAUGAGUAUUUCA___C_____________	3'
		_____________GUG_AGGA_GUGGUGAA
		_____________\|\|\|_\|\|.\|_\|\|\|\|\|\|\|\|
		_____________CAC_UCUU_CACCACUU
(miRNA)	3'	____________C___C____C________	5'

UTR3

6mer

955-982

0.00158080094449223

Position on chromosome:

15:43705474-43705501

Conserved species:

panTro2,rheMac2,canFam2,dasNov2

Binding area:

(Transcript)	5'	C___UGAGA_______CAACACC______	3'
		_CUG_____GUGGAGA_______GGUGAA
		_\|\|\|_____\|\|\|\|\|\|\|_______\|\|\|\|\|\|
		_GAC_____CACCUCU_______CCACUU
(miRNA)	3'	C___C___________UCCA_________	5'

UTR3

8mer

324-344

0.0309469142099001

Position on chromosome:

15:43699736-43699756

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,galGal3,tetNig2

Binding area:

(Transcript)	5'	GCUUUAG____AUUU__UGU________C	3'
		_______GGGU____GA___GGUGGUGA_
		_______\|\|\|\|____\|\|___\|\|\|\|\|\|\|\|_
		_______CCCA____CU___CCACCACU_
(miRNA)	3'	______A____CCU___U__________U	5'

ENSG00000173692 (PSMD1)

hsa-miR-197-3p

0.994672507390775

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

671-678

0.0704332033307508

Position on chromosome:

2:231941794-231941801

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	UGAAAAUGAUUAAAAUUUUAA________	3'
		_____________________GUGGUGAA
		_____________________\|\|\|\|\|\|\|\|
		_____________________CACCACUU
(miRNA)	3'	____________________C________	5'

UTR3

8mer

1042-1049

0.0171514926544902

Position on chromosome:

2:231944975-231944982

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,dasNov2,galGal3

Binding area:

(Transcript)	5'	GUCUUAUUCAUGCCAAUCAU________U	3'
		____________________GGUGGUGA_
		____________________\|\|\|\|\|\|\|\|_
		____________________CCACCACU_
(miRNA)	3'	___________________U________U	5'

UTR3

6mer

1797-1802

0.00859230453021482

Position on chromosome:

2:232011070;232018278-232011070;232018282

Conserved species:

panTro2,rheMac2,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,tetNig2,fr2,danRer6

Binding area:

(Transcript)	5'	CAGACUGAAAUCACUUGUCCAAA______	3'
		_______________________GGUGAA
		_______________________\|\|\|\|\|\|
		_______________________CCACUU
(miRNA)	3'	______________________A______	5'

ENSG00000189007 (ADAT2)

hsa-miR-197-3p

0.994502739129381

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

4777-4802

0.013829509622598

Position on chromosome:

6:143748746-143748771

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	AAA___GAUA__UGCCAUUU_________	3'
		___GGG____GG________GGUGGUGAG
		___\|\|\|____\|\|________\|\|\|\|\|\|\|\|.
		___CCC____CC________CCACCACUU
(miRNA)	3'	__A___A_____UCUU_____________	5'

UTR3

8mer

4377-4398

0.0468761430654862

Position on chromosome:

6:143748346-143748367

Conserved species:

panTro2,rheMac2,bosTau4,loxAfr3,echTel1

Binding area:

(Transcript)	5'	AUUACAG_____AAUGUAAUU________	3'
		_______GCUGG_________GUGGUGAA
		_______\|\|\|\|\|_________\|\|\|\|\|\|\|\|
		_______CGACC_________CACCACUU
(miRNA)	3'	____________CACCUCUUC________	5'

UTR3

7mer

3279-3295

0.00616897305712406

Position on chromosome:

6:143747248-143747264

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	GUGUACAAAAUA__UCU___A________	3'
		____________GU___GAA_GUGGUGAG
		____________\|\|___\|\|\|_\|\|\|\|\|\|\|.
		____________CA___CUU_CACCACUU
(miRNA)	3'	___________C__CCU___C________	5'

UTR3

6mer

1717-1742

0.00134927094872919

Position on chromosome:

6:143745686-143745711

Conserved species:

panTro2,rheMac2,loxAfr3

Binding area:

(Transcript)	5'	UU___AUAC__C___UGACCUA______U	3'
		__CUG____UG_AGA_______UGGUGA_
		__\|\|\|____\|\|_\|\|\|_______\|\|\|\|\|\|_
		__GAC____AC_UCU_______ACCACU_
(miRNA)	3'	_C___CC____C___UCC__________U	5'

UTR3

7mer

1509-1515

0.00347984951713407

Position on chromosome:

6:143745478-143745484

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	AUAGCGCCUUGUUAAAAAUCU_______U	3'
		_____________________GUGGUGA_
		_____________________\|\|\|\|\|\|\|_
		_____________________CACCACU_
(miRNA)	3'	____________________C_______U	5'

UTR3

6mer

1286-1302

0.00170706426333543

Position on chromosome:

6:143745255-143745271

Conserved species:

panTro2

Binding area:

(Transcript)	5'	ACGUGAUUUUUA____UU__AC_______	3'
		____________UGGA__AG__UGGUGAG
		____________\|\|\|\|__\|\|__\|\|\|\|\|\|.
		____________ACCU__UC__ACCACUU
(miRNA)	3'	___________C____CU__C________	5'

UTR3

7mer

367-388

0.0137917255359136

Position on chromosome:

6:143744336-143744357

Conserved species:

panTro2,rheMac2,canFam2

Binding area:

(Transcript)	5'	CUACAA___CAGA__U___CA________C	3'
		______UGG____GU_GAG___GUGGUGA_
		______\|\|\|____\|\|_\|\|\|___\|\|\|\|\|\|\|_
		______ACC____CA_CUC___CACCACU_
(miRNA)	3'	_____G_________C___UUC_______U	5'

UTR3

7mer

201-227

0.0084589773202715

Position on chromosome:

6:143744170-143744196

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	AU____CUCAUUGUAC__CUCA_______	3'
		__GUGG__________AG____UGGUGAA
		__\|\|\|\|__________\|\|____\|\|\|\|\|\|\|
		__CACC__________UC____ACCACUU
(miRNA)	3'	_C________________UUCC_______	5'

ENSG00000149380 (P4HA3)

hsa-miR-197-3p

0.994433485451667

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

1218-1238

0.00691950600774584

Position on chromosome:

11:73988152-73988172

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	AAGGACA___UUGACCCAAAAC______C	3'
		_______CUG____________UGGUGA_
		_______\|\|\|____________\|\|\|\|\|\|_
		_______GAC____________ACCACU_
(miRNA)	3'	______C___CCACCUCUUCC_______U	5'

UTR3

9mer

1142-1165

0.0606436051767396

Position on chromosome:

11:73988076-73988099

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,fr2

Binding area:

(Transcript)	5'	CCCUA__C___GUAUCUGC__________	3'
		_____UG_AGA________AGGUGGUGAA
		_____\|\|_\|\|\|________\|\|\|\|\|\|\|\|\|\|
		_____AC_UCU________UCCACCACUU
(miRNA)	3'	____C__C_____________________	5'

UTR3

8mer

922-947

0.013634502098173

Position on chromosome:

11:73979245-73979270

Conserved species:

panTro2,rheMac2,bosTau4,canFam2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	UUU_____AACCUGCAC_____________	3'
		___GGUGG_________AGGA_GUGGUGAA
		___\|\|\|\|\|_________\|\|.\|_\|\|\|\|\|\|\|\|
		___CCACC_________UCUU_CACCACUU
(miRNA)	3'	__C__________________C________	5'

UTR3

6mer

570-590

0.00330666944544723

Position on chromosome:

11:73971023-73971043

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	GCAGCCA___U__AAAAC___U________U	3'
		_______CUG_GG_____AGA___UGGUGA_
		_______\|\|\|_\|\|_____\|\|\|___\|\|\|\|\|\|_
		_______GAC_CC_____UCU___ACCACU_
(miRNA)	3'	______C______ACC_____UCC______U	5'

UTR3

7mer

194-210

0.0109514799185372

Position on chromosome:

11:73958726-73958742

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	CUUGAGACCAGC____CCAAAA___________	3'
		____________CUGG__________UGGUGAA
		____________\|\|\|\|__________\|\|\|\|\|\|\|
		____________GACC__________ACCACUU
(miRNA)	3'	___________C____CACCUCUUCC_______	5'

ENSG00000154358 (OBSCN)

hsa-miR-197-3p

0.993887422953329

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

16-43

0.0852666282854258

Position on chromosome:

1:228544045;228547298-228544045;228547324

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,monDom5,galGal3,xenTro2,tetNig2,fr2

Binding area:

(Transcript)	5'	A______AGACCAUCACCACU________	3'
		_GAGAAG______________GUGGUGAA
		_\|\|\|\|\|\|______________\|\|\|\|\|\|\|\|
		_CUCUUC______________CACCACUU
(miRNA)	3'	C____________________________	5'

UTR3

6mer

294-322

0.00404813281862907

Position on chromosome:

1:228547575-228547603

Conserved species:

panTro2,rheMac2,mm9,bosTau4,canFam2,dasNov2,galGal3,xenTro2

Binding area:

(Transcript)	5'	__________ACCAUUGAAGUCCG______	3'
		_GUGGAGGAG______________GGUGAA
		_\|\|\|\|\|\|.\|\|______________\|\|\|\|\|\|
		_CACCUCUUC______________CCACUU
(miRNA)	3'	C_________CA__________________	5'

UTR3

6mer

1529-1543

0.00460256799645318

Position on chromosome:

1:228548810-228548824

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	GGCCUUGCCUCUC___C______UCU_______C	3'
		_____________CUG_____AG____UGGUGA_
		_____________\|\|\|_____\|\|____\|\|\|\|\|\|_
		_____________GAC_____UC____ACCACU_
(miRNA)	3'	____________C___CCACC__UUCC______U	5'

ENSG00000147854 (UHRF2)

hsa-miR-197-3p

0.993441034996394

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

9mer

341-361

0.0944818255815085

Position on chromosome:

9:6497348;6498018-6497360;6498025

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,monDom5,galGal3,danRer6

Binding area:

(Transcript)	5'	AGAUAUGA___CAUUUAU___________	3'
		________UGG_______AAGGUGGUGAA
		________\|\|\|_______\|\|\|\|\|\|\|\|\|\|\|
		________ACC_______UUCCACCACUU
(miRNA)	3'	_______G___CACCUC____________	5'

UTR3

7mer

1189-1211

0.0105344499075154

Position on chromosome:

9:6481672-6481694

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	AUUCCA___A__UUGUA____C_______	3'
		______GUG_AG_____AAGG_UGGUGAA
		______\|\|\|_\|\|_____\|\|\|\|_\|\|\|\|\|\|\|
		______CAC_UC_____UUCC_ACCACUU
(miRNA)	3'	_____C___C___________________	5'

ENSG00000080603 (SRCAP)

hsa-miR-197-3p

0.993015283873984

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

7mer

547-564

0.0129083781944987

Position on chromosome:

16:30751602-30751619

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UCUACCCAAGA______AAGAU_______	3'
		___________AGAGGG_____UGGUGAA
		___________\|\|\|.\|\|_____\|\|\|\|\|\|\|
		___________UCUUCC_____ACCACUU
(miRNA)	3'	__________C__________________	5'

UTR3

8mer

1633-1640

0.0821363405919926

Position on chromosome:

16:30755594-30755601

Conserved species:

rheMac2,rn4,oryCun2,bosTau4,canFam2

Binding area:

(Transcript)	5'	UUGUAAUAAAAGCCUUUUUUA________	3'
		_____________________GUGGUGAA
		_____________________\|\|\|\|\|\|\|\|
		_____________________CACCACUU
(miRNA)	3'	____________________C________	5'

UTR3

9mer

2959-2980

0.00530925877182406

Position on chromosome:

16:30732063-30732084

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	CAAGAAG__C__ACA____U____________	3'
		_______GC_GG___GUGG____GGUGGUGAA
		_______\|\|_\|\|___\|\|\|\|____\|\|\|\|\|\|\|\|\|
		_______CG_CC___CACC____CCACCACUU
(miRNA)	3'	_________A_________UCUU_________	5'

UTR3

7mer

3353-3379

0.0111313716027898

Position on chromosome:

16:30733600;30734284-30733607;30734302

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	CC____CAAA__CCACCAACCA_______	3'
		__GCUG____UG__________UGGUGAA
		__\|\|\|\|____\|\|__________\|\|\|\|\|\|\|
		__CGAC____AC__________ACCACUU
(miRNA)	3'	______CC____CUCUUCC__________	5'

UTR3

8mer

3374-3397

0.00349053748703937

Position on chromosome:

16:30734297-30734320

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	ACCAU____AAUAAUAC___C________	3'
		_____GGUG________AGG_GUGGUGAA
		_____\|\|\|\|________\|.\|_\|\|\|\|\|\|\|\|
		_____CCAC________UUC_CACCACUU
(miRNA)	3'	____C____CUC_________________	5'

ENSG00000184371 (CSF1)

hsa-miR-197-3p

0.991952000177618

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

258-277

0.00131956809064713

Position on chromosome:

1:110471719-110471738

Conserved species:

panTro2

Binding area:

(Transcript)	5'	CUCCCAUGU________A______C_______	3'
		_________GCU___UG_GGAAGG_UGGUGAG
		_________\|\|\|___\|\|_.\|\|\|\|\|_\|\|\|\|\|\|.
		_________CGA___AC_UCUUCC_ACCACUU
(miRNA)	3'	____________CCC__C______________	5'

UTR3

8mer

2053-2067

0.0897657470971629

Position on chromosome:

1:110473514-110473528

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,echTel1

Binding area:

(Transcript)	5'	AUUUUGUUUUUAUA_________A___________	3'
		______________CU___UGGA____GUGGUGAA
		______________\|\|___\|\|\|\|____\|\|\|\|\|\|\|\|
		______________GA___ACCU____CACCACUU
(miRNA)	3'	_____________C__CCC____CUUC________	5'

UTR3

7mer

525-552

0.0116595552607817

Position on chromosome:

1:110464598;110465788-110464616;110465796

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	____AA__CUCCAGCCA___U________C	3'
		GCUG__UG_________AGA__GUGGUGA_
		\|\|\|\|__\|\|_________\|\|\|__\|\|\|\|\|\|\|_
		CGAC__AC_________UCU__CACCACU_
(miRNA)	3'	____CC__C___________UC_______U	5'

ENSG00000115170 (ACVR1)

hsa-miR-197-3p

0.991404695040291

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

9mer

705-728

0.0883053269194975

Position on chromosome:

2:158593663-158593686

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3

Binding area:

(Transcript)	5'	CCCCA_____AAACUCA_____________	3'
		_____C_GGG_______AGGAGGUGGUGAA
		_____\|_\|\|\|_______\|\|.\|\|\|\|\|\|\|\|\|\|
		_____G_CCC_______UCUUCCACCACUU
(miRNA)	3'	____C_A___ACC_________________	5'