DIANA TOOLS - MicroT-CDS

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Results: 80 targets with miRNAs found in genes ENSG00000171621

. Threshold is set to 0.7.

Gene ID:	SPSB1
Expression:	lymph node,prefrontal cortex,H1-hESC,breast,appendix,HUVEC cell line,HSMM cell line,liver,salivary gland,temporal lobe,HMEC cell line,gall bladder,IMR-90,MCF-7,adrenal gland,brain,HepG2,BJ,small intestine,HeLa-S3,colon,esophagus,placenta,NHLF cell line,A549,adrenal,SK-N-SH_RA,leukocyte,adipose tissue,cerebellum,ovary,SK-N-SH,stomach,bone marrow,kidney,pancreas,frontal lobe,cerebral cortex,skin,skeletal muscle,NHEK cell line,heart,animal ovary,prostate,lung,thyroid,CD20-positive B cell cell line,
External Gene ID:	ENSG00000171621
Description:
Chromosome:	1
DIANA resources:	microT-CDS

Ensembl Gene Id

miRNA name

miTG score

Also Predicted

ENSG00000171621 (SPSB1)

hsa-miR-6862-3p

0.984260647200865

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

1579-1597

0.0782998863674524

Position on chromosome:

1:9429214-9429232

Conserved species:

rheMac2,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3

Binding area:

(Transcript)	5'	CACAAAAUU__U__________________A	3'
		_________GG_GCCA_AGA_CUGGGUGAG_
		_________\|\|_\|\|\|\|_\|\|\|_\|\|\|\|\|\|\|\|\|_
		_________CC_CGGU_UCU_GACCCACUC_
(miRNA)	3'	________U_______C___C_________C	5'

ENSG00000171621 (SPSB1)

hsa-miR-600

0.963435636701871

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

1485-1496

0.0520965797783645

Position on chromosome:

1:9429120-9429131

Conserved species:

panTro2,rheMac2,oryCun2,canFam2,echTel1

Binding area:

(Transcript)	5'	CAUACAUAUAUAUAUA____________A	3'
		________________UUUGUCUGUAAG_
		________________.\|\|\|\|\|\|\|\|\|\|\|_
		________________GAACAGACAUUC_
(miRNA)	3'	_______________A____________A	5'

UTR3

7mer

1642-1664

0.0120773119772007

Position on chromosome:

1:9429277-9429299

Conserved species:

panTro2,rheMac2,oryCun2,dasNov2

Binding area:

(Transcript)	5'	UUUCG________GA_CUUAC_______A	3'
		_____GGGCAGGG__C_____CUGUAAG_
		_____\|.\|\|\|.\|\|__\|_____\|\|\|\|\|\|\|_
		_____CUCGUUCC__G_____GACAUUC_
(miRNA)	3'	_____________GA_AACA________A	5'

ENSG00000171621 (SPSB1)

hsa-miR-593-5p

0.962325799068668

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

19-40

0.0272517741637156

Position on chromosome:

1:9427654-9427675

Conserved species:

panTro2,rheMac2,rn4,mm9,canFam2,dasNov2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	ACCGCC____CGACA___AC_________A	3'
		______AGCG_____GCC___CUGGUGCC_
		______\|\|\|._____\|\|\|___\|\|\|\|\|\|\|\|_
		______UCGU_____CGG___GACCACGG_
(miRNA)	3'	_____C____UA______ACC________A	5'

UTR3

8mer

428-453

0.00207612425813052

Position on chromosome:

1:9428063-9428088

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	AA___________AGACAAG__________C	3'
		__GAG__GUGCUU_______GGCUGGUGCC_
		__\|\|\|__.\|\|\|.\|_______\|\|\|\|\|\|\|\|\|\|_
		__CUC__UACGGA_______CCGACCACGG_
(miRNA)	3'	_A___GU_______________________A	5'

UTR3

6mer

443-467

0.00105932456901087

Position on chromosome:

1:9428078-9428102

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	CAA____U______C___CCAG______C	3'
		___GGGC_GGUGCC_GGC____GGUGCC_
		___\|.\|\|_..\|\|\|\|_\|\|\|____\|\|\|\|\|\|_
		___CUCG_UUACGG_CCG____CCACGG_
(miRNA)	3'	__A___________A___A_________A	5'

UTR3

6mer

568-592

0.000926093521646907

Position on chromosome:

1:9428203-9428227

Conserved species:

panTro2,rheMac2,loxAfr3

Binding area:

(Transcript)	5'	CCC____CCC__________GCC______C	3'
		___AGCA___AU_CCUGGCU___GGUGCC_
		___\|\|\|\|___\|\|_\|\|\|\|\|\|\|___\|\|\|\|\|\|_
		___UCGU___UA_GGACCGA___CCACGG_
(miRNA)	3'	__C_________C________________A	5'

UTR3

6mer

1283-1309

0.00185896796927771

Position on chromosome:

1:9428918-9428944

Conserved species:

panTro2

Binding area:

(Transcript)	5'	A___C____________AAGAGAGG______C	3'
		_GCU_GGC__UGCC_GG________GGUGCC_
		_\|\|\|_.\|\|__\|\|\|\|_\|\|________\|\|\|\|\|\|_
		_CGA_UCG__ACGG_CC________CCACGG_
(miRNA)	3'	____C___UU____A__GA____________A	5'

UTR3

7mer

1568-1584

0.0304940610867434

Position on chromosome:

1:9429203-9429219

Conserved species:

panTro2,rheMac2,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	AUAUUUUUUAA____CAAAA___________A	3'
		___________AGCA________UUGGUGCC_
		___________\|\|\|\|________.\|\|\|\|\|\|\|_
		___________UCGU________GACCACGG_
(miRNA)	3'	__________C____UACGGACC________A	5'

ENSG00000171621 (SPSB1)

hsa-miR-5194

0.961514234004875

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

115-132

0.00234557405532033

Position on chromosome:

1:9427750-9427767

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	CAUGGACAGAG_____UGG__U_________	3'
		___________GUCCC___UC___UCCCUCA
		___________.\|\|\|\|___.\|___.\|\|\|\|\|\|
		___________UAGGG___GG___GGGGAGU
(miRNA)	3'	__________G_____UAA__UUU_______	5'

UTR3

8mer

224-247

0.0409988170748801

Position on chromosome:

1:9427859-9427882

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	CCUG___G________UAUAC________U	3'
		____CAU_CCG_UCCG_____AACCCCUC_
		____\|\|\|_\|\|._\|\|\|._____\|\|\|\|\|\|\|\|_
		____GUA_GGU_AGGU_____UUGGGGAG_
(miRNA)	3'	___G___G___A_________________U	5'

UTR3

6mer

659-676

0.00166684623696796

Position on chromosome:

1:9428294-9428311

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	AGAAAGGAAA___U_______U______U	3'
		__________CCC_GUUUCAG_CCCCUC_
		__________\|\|\|_.\|\|.\|\|._\|\|\|\|\|\|_
		__________GGG_UAAGGUU_GGGGAG_
(miRNA)	3'	_________A___________U______U	5'

UTR3

7mer

825-848

0.00224176299114881

Position on chromosome:

1:9428460-9428483

Conserved species:

panTro2,oryCun2,canFam2

Binding area:

(Transcript)	5'	CUGCU___AGU______AG__GG_______	3'
		_____CCA___UCCC_U__CG__CCCCUCA
		_____\|\|\|___\|\|\|\|_\|__\|.__\|\|\|\|\|\|\|
		_____GGU___AGGG_A__GU__GGGGAGU
(miRNA)	3'	_______________U_AG__UU_______	5'

UTR3

8mer

1238-1262

0.00728521745312516

Position on chromosome:

1:9428873-9428897

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UAA__GC____GUUCA___C________U	3'
		___CA__CCCA_____UCC_AACCCCUC_
		___\|\|__\|\|\|\|_____\|\|\|_\|\|\|\|\|\|\|\|_
		___GU__GGGU_____AGG_UUGGGGAG_
(miRNA)	3'	__G__A_____A_______U________U	5'

UTR3

8mer

1310-1328

0.00876600112355166

Position on chromosome:

1:9428945-9428963

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	AGGGGUGCC_______UGG___________C	3'
		_________CUAUCCC___C__AACCCCUC_
		_________\|.\|\|\|\|\|___\|__\|\|\|\|\|\|\|\|_
		_________GGUAGGG___G__UUGGGGAG_
(miRNA)	3'	________________UAA_GU________U	5'

ENSG00000171621 (SPSB1)

hsa-miR-5011-5p

0.953396812552795

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

7mer

1445-1466

0.0142228375295451

Position on chromosome:

1:9429080-9429101

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,monDom5

Binding area:

(Transcript)	5'	CUUUAUU___UUAAAA___UUA_______	3'
		_______UGU______UGU___AUAUAUA
		_______\|\|.______\|\|\|___\|\|\|\|\|\|\|
		_______ACG______ACA___UAUAUAU
(miRNA)	3'	______C___UACCG______________	5'

UTR3

8mer

1453-1468

0.0182006514191792

Position on chromosome:

1:9429088-9429103

Conserved species:

panTro2,rheMac2,oryCun2,canFam2,monDom5

Binding area:

(Transcript)	5'	UUAUUUGUUUAAA___UUUAA________	3'
		_____________AUG_____UAUAUAUA
		_____________\|\|\|_____\|\|\|\|\|\|\|\|
		_____________UAC_____AUAUAUAU
(miRNA)	3'	____________G___CGAC_________	5'

UTR3

7mer

1474-1480

0.00784541493618862

Position on chromosome:

1:9429109-9429115

Conserved species:

panTro2,rheMac2,mm9,oryCun2

Binding area:

(Transcript)	5'	AAUGUUUAAUAUAUAUACAUAC_______	3'
		______________________AUAUAUA
		______________________\|\|\|\|\|\|\|
		______________________UAUAUAU
(miRNA)	3'	_____________________A_______	5'

UTR3

8mer

1469-1482

0.0131097074937406

Position on chromosome:

1:9429104-9429117

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UGUUUAAUAUAUAUA___ACA__________	3'
		_______________CAU_____UAUAUAUA
		_______________\|\|\|_____\|\|\|\|\|\|\|\|
		_______________GUA_____AUAUAUAU
(miRNA)	3'	______________C___CCGAC________	5'

UTR3

7mer

1473-1485

0.00665912779177673

Position on chromosome:

1:9429108-9429120

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UAAUAUAUAUACAUA___AUA_________U	3'
		_______________CAU_____UAUAUAU_
		_______________\|\|\|_____\|\|\|\|\|\|\|_
		_______________GUA_____AUAUAUA_
(miRNA)	3'	______________C___CCGAC_______U	5'

ENSG00000171621 (SPSB1)

hsa-miR-6784-3p

0.943789398999861

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

1577-1598

0.0568087535248914

Position on chromosome:

1:9429212-9429233

Conserved species:

rheMac2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	CACAAAA____U__CA__ACU________	3'
		_______UUGG_GC__AG___GGGUGAGA
		_______.\|\|\|_\|\|__\|\|___\|\|\|\|\|\|\|\|
		_______GACC_CG__UC___CCCACUCU
(miRNA)	3'	___________C__UC__AAC________	5'

ENSG00000171621 (SPSB1)

hsa-miR-3924

0.942415699657727

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

1461-1472

0.0450043022918196

Position on chromosome:

1:9429096-9429107

Conserved species:

panTro2,rheMac2,oryCun2,canFam2

Binding area:

(Transcript)	5'	UGUUUAAAAUGUUUAA____________C	3'
		________________UAUAUAUACAUA_
		________________.\|.\|\|\|\|\|\|\|\|\|_
		________________GUGUAUAUGUAU_
(miRNA)	3'	_______________A____________A	5'

UTR3

8mer

1463-1477

0.0113860269430031

Position on chromosome:

1:9429098-9429112

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UAAAAUGUUUAAUA_____AC________	3'
		______________UAUAU__AUACAUAU
		______________.\|.\|\|__\|\|\|\|\|\|\|\|
		______________GUGUA__UAUGUAUA
(miRNA)	3'	_____________A_______________	5'

ENSG00000171621 (SPSB1)

hsa-miR-5688

0.921760863050772

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

1421-1448

0.00736163521947437

Position on chromosome:

1:9429056-9429083

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,monDom5

Binding area:

(Transcript)	5'	______UACAAUAGA__ACUUUA______U	3'
		_ACAGG_________UG______UUUGUU_
		_\|\|\|\|\|_________\|\|______\|\|\|\|\|\|_
		_UGUCC_________AC______AAACAA_
(miRNA)	3'	A____________________________U	5'

UTR3

8mer

1933-1946

0.0436567534801537

Position on chromosome:

1:9429568-9429581

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2

Binding area:

(Transcript)	5'	UCAGUAACCUAAUAA___AAC________	3'
		_______________AGG___GUUUGUUA
		_______________\|\|\|___\|\|\|\|\|\|\|\|
		_______________UCC___CAAACAAU
(miRNA)	3'	______________G___A__________	5'

ENSG00000171621 (SPSB1)

hsa-miR-6835-5p

0.916381461671244

Gene details
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miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

175-193

0.00367855190491585

Position on chromosome:

1:9427810-9427828

Conserved species:

panTro2,rheMac2,echTel1

Binding area:

(Transcript)	5'	GAUUCCAACA___G_U_C____UU______	3'
		__________CAG_C_C__UCU__CCCCCU
		__________\|\|\|_\|_\|__\|\|\|__\|\|\|\|\|\|
		__________GUC_G_G__AGA__GGGGGA
(miRNA)	3'	_________A___G_U_AA___U_______	5'

UTR3

6mer

1071-1087

0.00159538595711453

Position on chromosome:

1:9428706-9428722

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	GAAGCUCUGGG_GU____GAGG________A	3'
		___________U__GCCA______ACCCCC_
		___________\|__\|\|\|\|______\|\|\|\|\|\|_
		___________A__CGGU______UGGGGG_
(miRNA)	3'	__________A_GU____GAAAGA______A	5'

UTR3

8mer

1603-1615

0.0415564066186699

Position on chromosome:

1:9429238-9429250

Conserved species:

panTro2,rheMac2,canFam2,dasNov2

Binding area:

(Transcript)	5'	GACUGGGUGAGAAAUG___A___________	3'
		________________UAC___UUACCCCCU
		________________.\|\|___.\|\|\|\|\|\|\|\|
		________________GUG___GAUGGGGGA
(miRNA)	3'	_______________G___AAA_________	5'

UTR3

6mer

1786-1811

0.00300558636946537

Position on chromosome:

1:9429421-9429446

Conserved species:

panTro2,rheMac2,loxAfr3

Binding area:

(Transcript)	5'	UC________C___GCAUCUCCC______C	3'
		__UAGCU_CU_UCU_________ACCCCC_
		__.\|\|\|._\|\|_\|\|\|_________\|\|\|\|\|\|_
		__GUCGG_GA_AGA_________UGGGGG_
(miRNA)	3'	_A_____U__A__________________A	5'

ENSG00000171621 (SPSB1)

hsa-miR-2113

0.910015100375136

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

1552-1575

0.0485227246097506

Position on chromosome:

1:9429187-9429210

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,loxAfr3

Binding area:

(Transcript)	5'	CAGU_____AUAUUUUUUA_________A	3'
		____GGAGU__________AAGCACAAA_
		____.\|\|\|.__________\|\|\|\|\|\|\|\|\|_
		____UCUCG__________UUCGUGUUU_
(miRNA)	3'	___G_____G__________________A	5'

ENSG00000171621 (SPSB1)

hsa-miR-5590-3p

0.905570887550892

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

593-610

0.00675882390950446

Position on chromosome:

1:9428228-9428245

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	CUGCCGGUGCC______CC__UA_______	3'
		___________CCGUAC__UG___UUUAUU
		___________\|\|.\|\|\|__\|\|___\|\|\|\|\|\|
		___________GGUAUG__AC___AAAUAA
(miRNA)	3'	__________C______U___UUG______	5'

UTR3

6mer

629-638

0.00724779196901876

Position on chromosome:

1:9428264-9428273

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	UCUUUUAACAAUAACAAAA___________________	3'
		___________________GCCAU_________UUAUU
		___________________\|\|\|\|\|_________\|\|\|\|\|
		___________________CGGUA_________AAUAA
(miRNA)	3'	__________________A_____UGUACUUGA_____	5'

UTR3

6mer

629-642

0.004808770783384

Position on chromosome:

1:9428264-9428277

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,monDom5

Binding area:

(Transcript)	5'	UUAACAAUAACAAAA_____UUA___________	3'
		_______________GCCAU________UUUAUU
		_______________\|\|\|\|\|________\|\|\|\|\|\|
		_______________CGGUA________AAAUAA
(miRNA)	3'	______________A_____UGUACUUG______	5'

UTR3

8mer

1425-1444

0.0288394222445898

Position on chromosome:

1:9429060-9429079

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,monDom5

Binding area:

(Transcript)	5'	UCUGCACAG__ACA___G____________	3'
		_________GU___AUA_AUG_ACUUUAUU
		_________\|.___\|\|\|_\|\|\|_\|\|\|\|\|\|\|\|
		_________CG___UAU_UAC_UGAAAUAA
(miRNA)	3'	________A__G_____G___U________	5'

ENSG00000171621 (SPSB1)

hsa-miR-1264

0.90065278496003

Gene details
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miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

1643-1668

0.0467359968344009

Position on chromosome:

1:9429278-9429303

Conserved species:

panTro2,rheMac2,dasNov2,loxAfr3

Binding area:

(Transcript)	5'	GG______GGAC____CCU_________U	3'
		__GGCAGG____CUUA___GUAAGACUU_
		__..\|\|\|\|____\|\|.\|___.\|\|\|\|\|\|\|\|_
		__UUGUCC____GAGU___UAUUCUGAA_
(miRNA)	3'	________AC______U___________C	5'

ENSG00000171621 (SPSB1)

hsa-miR-1323

0.896616489752711

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

986-1003

0.00177036836908142

Position on chromosome:

1:9428621-9428638

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	AUUUCUUUAGU_UU__GU_GGUC______	3'
		___________C__CU__G____UUUUGA
		___________\|__\|\|__\|____\|\|\|\|\|\|
		___________G__GA__C____AAAACU
(miRNA)	3'	__________C_GG__GU___________	5'

UTR3

6mer

1611-1626

0.00479758736643504

Position on chromosome:

1:9429246-9429261

Conserved species:

panTro2,rheMac2,rn4,mm9,canFam2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	AAAUGUACAUUAC_______UUA______	3'
		_____________CCCCUUA___UUUUGA
		_____________\|\|\|\|\|.\|___\|\|\|\|\|\|
		_____________GGGGAGU___AAAACU
(miRNA)	3'	____________C_______C________	5'

UTR3

9mer

1857-1883

0.0394437404688026

Position on chromosome:

1:9429492-9429518

Conserved species:

panTro2,rheMac2,bosTau4,canFam2,dasNov2

Binding area:

(Transcript)	5'	CC____CCUU___G___GUA_________	3'
		__AGAG____GUG_CUU___CAGUUUUGA
		__\|\|\|.____.\|\|_\|..___\|\|\|\|\|\|\|\|\|
		__UCUU____UAC_GGG___GUCAAAACU
(miRNA)	3'	______U______G___A___________	5'

ENSG00000171621 (SPSB1)

hsa-miR-3145-3p

0.89239242878961

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

1935-1953

0.0452800138459707

Position on chromosome:

1:9429570-9429588

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	CUAAUAAAG_______UGU_________A	3'
		_________GAACGUU___UAAAAUAUC_
		_________.\|\|\|..\|___.\|\|\|\|\|\|\|\|_
		_________UUUGUGA___GUUUUAUAG_
(miRNA)	3'	________G___________________A	5'

ENSG00000171621 (SPSB1)

hsa-miR-190a-3p

0.884030919151109

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

7mer

1453-1466

0.0143897966445754

Position on chromosome:

1:9429088-9429101

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,monDom5

Binding area:

(Transcript)	5'	UUUAUUUGUUUAAA______A_______U	3'
		______________AUGUUU_AUAUAUA_
		______________\|\|\|\|\|\|_\|\|\|\|\|\|\|_
		______________UACAAA_UAUAUAU_
(miRNA)	3'	_____________A______C_______C	5'

UTR3

7mer

1453-1468

0.0109270021419721

Position on chromosome:

1:9429088-9429103

Conserved species:

panTro2,rheMac2,oryCun2,canFam2,monDom5

Binding area:

(Transcript)	5'	UAUUUGUUUAAA______AAU_______C	3'
		____________AUGUUU___AUAUAUA_
		____________\|\|\|\|\|\|___\|\|\|\|\|\|\|_
		____________UACAAA___UAUAUAU_
(miRNA)	3'	___________A______C_________C	5'

UTR3

7mer

1474-1480

0.00615717855260724

Position on chromosome:

1:9429109-9429115

Conserved species:

panTro2,rheMac2,mm9,oryCun2

Binding area:

(Transcript)	5'	AUGUUUAAUAUAUAUACAUAC_______U	3'
		_____________________AUAUAUA_
		_____________________\|\|\|\|\|\|\|_
		_____________________UAUAUAU_
(miRNA)	3'	____________________C_______C	5'

UTR3

7mer

1476-1482

0.00597008727326843

Position on chromosome:

1:9429111-9429117

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	GUUUAAUAUAUAUACAUACAU_______U	3'
		_____________________AUAUAUA_
		_____________________\|\|\|\|\|\|\|_
		_____________________UAUAUAU_
(miRNA)	3'	____________________C_______C	5'

UTR3

7mer

1478-1484

0.00645902797785561

Position on chromosome:

1:9429113-9429119

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UUAAUAUAUAUACAUACAUAU_______U	3'
		_____________________AUAUAUA_
		_____________________\|\|\|\|\|\|\|_
		_____________________UAUAUAU_
(miRNA)	3'	____________________C_______C	5'

ENSG00000171621 (SPSB1)

hsa-miR-1271-5p

0.87650192065189

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

19-42

0.0158805987995944

Position on chromosome:

1:9427654-9427677

Conserved species:

panTro2,rn4,mm9,bosTau4,dasNov2

Binding area:

(Transcript)	5'	CGCC__C__GACA__CACCU________C	3'
		____AG_GC____GC_____GGUGCCAA_
		____\|\|_\|\|____\|\|_____\|\|\|\|\|\|\|\|_
		____UC_CG____CG_____CCACGGUU_
(miRNA)	3'	___C__A__AA____AU___________C	5'

UTR3

9mer

1569-1587

0.026854634629981

Position on chromosome:

1:9429204-9429222

Conserved species:

panTro2,rheMac2,mm9,bosTau4,canFam2,loxAfr3,echTel1,monDom5,xenTro2

Binding area:

(Transcript)	5'	AUUUUUUAAA__ACAAAAUU_________	3'
		__________GC________GGUGCCAAG
		__________\|\|________\|\|\|\|\|\|\|\|\|
		__________CG________CCACGGUUC
(miRNA)	3'	_________A__AACGAU___________	5'

ENSG00000171621 (SPSB1)

hsa-miR-646

0.869947692129862

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

1503-1518

0.0401426198480083

Position on chromosome:

1:9429138-9429153

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	UGUAAGAAUUAU______AA__________G	3'
		____________GUUUUA____CAGCUGCU_
		____________\|..\|.\|____\|\|\|\|\|\|\|\|_
		____________CGGAGU____GUCGACGA_
(miRNA)	3'	__________________CUCC________A	5'

UTR3

8mer

139-157

0.012728952385039

Position on chromosome:

1:9416090-9416108

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	CCCCUGUGU___AUGAUGUC________G	3'
		_________CCU________CAGCUGCU_
		_________\|\|\|________\|\|\|\|\|\|\|\|_
		_________GGA________GUCGACGA_
(miRNA)	3'	________C___GUCUCC__________A	5'

ENSG00000171621 (SPSB1)

hsa-miR-615-5p

0.856422134573771

Gene details
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miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

7mer

514-526

0.0110736735650598

Position on chromosome:

1:9428149-9428161

Conserved species:

rheMac2

Binding area:

(Transcript)	5'	AGGACGUCAAAAACU____AU_______A	3'
		_______________CACC__GGACCCC_
		_______________\|\|\|\|__\|\|\|\|\|\|\|_
		_______________GUGG__CCUGGGG_
(miRNA)	3'	______________C____CC_______G	5'

UTR3

8mer

1065-1087

0.0167190214878152

Position on chromosome:

1:9428700-9428722

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	AGAAGC_______GU___A_A________	3'
		______UCUGGGU__GCC_G_GGACCCCC
		______\|\|.\|.\|.__.\|\|_\|_\|\|\|\|\|\|\|\|
		______AGGCUCG__UGG_C_CCUGGGGG
(miRNA)	3'	_____U____________C__________	5'

UTR3

6mer

1588-1614

0.00566535663994548

Position on chromosome:

1:9429223-9429249

Conserved species:

panTro2,rheMac2,canFam2,dasNov2

Binding area:

(Transcript)	5'	AG______U_AGAAAUGUACAUU______	3'
		__ACUGGG_G_____________ACCCCC
		__\|\|.\|\|\|_\|_____________\|\|\|\|\|\|
		__UGGCCC_C_____________UGGGGG
(miRNA)	3'	_G___________________________	5'

UTR3

6mer

1792-1811

0.00351929967499608

Position on chromosome:

1:9429427-9429446

Conserved species:

panTro2,rheMac2,loxAfr3

Binding area:

(Transcript)	5'	CUCUAGCUC___CU_____UCCC______	3'
		_________UCU__GCAUC____ACCCCC
		_________\|\|.__\|\|\|.\|____\|\|\|\|\|\|
		_________AGG__CGUGG____UGGGGG
(miRNA)	3'	________U___CU_____CCCC______	5'

UTR3

6mer

1811-1835

0.00230591324904679

Position on chromosome:

1:9429446-9429470

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	CCC_________CU___ACCCUC______A	3'
		___CCGA_CACC__GGG______GACCCC_
		___\|\|\|\|_\|\|\|\|__\|\|\|______\|\|\|\|\|\|_
		___GGCU_GUGG__CCC______CUGGGG_
(miRNA)	3'	__A____C_____________________G	5'

UTR3

8mer

31-50

0.00461958463746295

Position on chromosome:

1:9415982-9416001

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	GAUCAAGA___U_G__A__A________A	3'
		________CUG_G_AC_UG_GGGACCCC_
		________\|.\|_\|_\|\|_.\|_\|\|\|\|\|\|\|\|_
		________GGC_C_UG_GC_CCCUGGGG_
(miRNA)	3'	_______A___U_G______________G	5'

ENSG00000171621 (SPSB1)

hsa-miR-5692a

0.85333090371021

Gene details
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miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

623-639

0.0120345562670502

Position on chromosome:

1:9428258-9428274

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	UUUUAACAAUA___AAAG_________________A	3'
		___________ACA____CCAUU_______UAUUU_
		___________\|\|\|____\|\|\|.\|_______\|\|\|\|\|_
		___________UGU____GGUGA_______AUAAA_
(miRNA)	3'	______________G________CACCAUA_____C	5'

UTR3

7mer

1420-1446

0.0106529081313288

Position on chromosome:

1:9429055-9429081

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,monDom5

Binding area:

(Transcript)	5'	UG___A______CAAUAGAUGACU_______	3'
		__CAC___GGUA____________UUAUUUG
		__\|\|\|___\|\|\|\|____________\|\|\|\|\|\|\|
		__GUG___CCAU____________AAUAAAC
(miRNA)	3'	_G___ACA_______________________	5'

UTR3

8mer

1608-1623

0.0167994924409699

Position on chromosome:

1:9429243-9429258

Conserved species:

panTro2,rheMac2,canFam2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	AGAAAUGUACAU_____C______________U	3'
		____________UACCC_CU____UAUUAUUU_
		____________.\|\|\|\|_\|\|____\|\|\|\|\|\|\|\|_
		____________GUGGG_GA____AUAAUAAA_
(miRNA)	3'	___________U_____U__CACC________C	5'

ENSG00000171621 (SPSB1)

hsa-miR-4739

0.848110396294666

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

7mer

698-719

0.00393004159445397

Position on chromosome:

1:9428333-9428354

Conserved species:

panTro2,rheMac2,rn4,mm9,loxAfr3,echTel1

Binding area:

(Transcript)	5'	UUACUU_______A_____GUGC_______G	3'
		______UCCUUCC___CCU____CCUCCCU_
		______.\|\|.\|\|\|___\|\|\|____\|\|\|\|\|\|\|_
		______GGGGAGG___GGA____GGAGGGA_
(miRNA)	3'	_____C_______CGA______________A	5'

UTR3

7mer

731-748

0.000662398356269991

Position on chromosome:

1:9428366-9428383

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	GGAUAUGUAU_____GC_______________G	3'
		__________GCCUC__CCGC____CCUCCCU_
		__________\|\|\|.\|__\|\|\|\|____\|\|\|\|\|\|\|_
		__________CGGGG__GGCG____GGAGGGA_
(miRNA)	3'	_________C_____A_____AGGA_______A	5'

UTR3

6mer

772-797

0.0010431458863994

Position on chromosome:

1:9428407-9428432

Conserved species:

panTro2,rheMac2,dasNov2

Binding area:

(Transcript)	5'	CCA___ACAAGUAUG_____GGG______	3'
		___GGC_________UCUCU___UCCCUU
		___\|\|\|_________.\|\|\|.___\|\|\|\|\|\|
		___CCG_________GGAGG___AGGGAA
(miRNA)	3'	__C___GGGAGGCGA______________	5'

UTR3

8mer

1666-1686

0.0309845596854774

Position on chromosome:

1:9429301-9429321

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UGUAAGA_UU__AAA_A___________C	3'
		_______C__UU___G_UUUUCCUCCCU_
		_______\|__.\|___\|_\|..\|\|\|\|\|\|\|\|_
		_______G__GA___C_AGGAGGAGGGA_
(miRNA)	3'	______C_GG__GG__G___________A	5'

UTR3

6mer

1699-1726

0.00219488617276027

Position on chromosome:

1:9429334-9429361

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	U_____ACA_____AUGAAUG________	3'
		_GGGUC___UUCUG_______UUUCCCUU
		_\|\|\|.\|___.\|\|.\|_______..\|\|\|\|\|\|
		_CCCGG___GAGGC_______GGAGGGAA
(miRNA)	3'	U_____G_______GAGGA__________	5'

ENSG00000171621 (SPSB1)

hsa-miR-4419a

0.846393906341077

Gene details
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miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

7mer

114-132

0.00729733078276417

Position on chromosome:

1:9427749-9427767

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	CAUGGACAGA____CCUGG__________	3'
		__________GGUC_____UCUUCCCUCA
		__________.\|\|\|_____\|\|.\|\|\|\|\|\|\|
		__________UCAG_____AGGAGGGAGU
(miRNA)	3'	_________G___________________	5'

UTR3

8mer+wobble

667-680

0.00262566702170185

Position on chromosome:

1:9428302-9428315

Conserved species:

panTro2,rheMac2,canFam2,dasNov2

Binding area:

(Transcript)	5'	AGGAAACCCUGUUU_____C________U	3'
		______________CAGUC_CCUCUCUC_
		______________\|\|\|\|\|_\|\|\|\|.\|\|\|_
		______________GUCAG_GGAGGGAG_
(miRNA)	3'	_____________C_____A________U	5'

UTR3

6mer

821-848

0.00157184926540819

Position on chromosome:

1:9428456-9428483

Conserved species:

panTro2,oryCun2,canFam2

Binding area:

(Transcript)	5'	C___UCCA____C___AGCGGGC______	3'
		_UGC____AGUU_CCU_______CCCUCA
		_\|\|\|____\|\|\|._\|\|\|_______\|\|\|\|\|\|
		_ACG____UCAG_GGA_______GGGAGU
(miRNA)	3'	____________A________________	5'

UTR3

8mer

1673-1687

0.0262160992884543

Position on chromosome:

1:9429308-9429322

Conserved species:

panTro2,rheMac2,dasNov2

Binding area:

(Transcript)	5'	GUAAGACUUUUAA__AU___________C	3'
		_____________AG__UUUCCUCCCUC_
		_____________\|\|__\|.\|\|\|\|\|\|\|\|\|_
		_____________UC__AGAGGAGGGAG_
(miRNA)	3'	____________G_______________U	5'

UTR3

7mer

784-798

0.00630732853387291

Position on chromosome:

1:9427597-9427611

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	CCACACGCUGCCGC___C_G___________	3'
		______________UGC_G___CUUCCCUCA
		______________\|\|\|_\|___\|.\|\|\|\|\|\|\|
		______________ACG_C___GGAGGGAGU
(miRNA)	3'	_________________U_AGA_________	5'

ENSG00000171621 (SPSB1)

hsa-miR-135a-5p

0.836560361423884

Gene details
	loading...
miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

81-107

0.00263094452611203

Position on chromosome:

1:9427716-9427742

Conserved species:

panTro2,rheMac2,mm9

Binding area:

(Transcript)	5'	UG___CUU___CCGGCAUCCGU_______	3'
		__CAC___GGA___________AGCCAUG
		__\|\|\|___\|\|\|___________\|\|\|\|\|\|.
		__GUG___CCU___________UCGGUAU
(miRNA)	3'	_A___UAU___UAUUUU____________	5'

UTR3

8mer

619-633

0.0347621323429865

Position on chromosome:

1:9428254-9428268

Conserved species:

panTro2,rheMac2,bosTau4,canFam2,dasNov2,loxAfr3

Binding area:

(Transcript)	5'	UUAUUCUUUUAAC_____CA________U	3'
		_____________AAUAA__AAAGCCAU_
		_____________\|\|\|\|\|__\|\|\|\|\|\|\|\|_
		_____________UUAUU__UUUCGGUA_
(miRNA)	3'	____________C_______________U	5'

ENSG00000171621 (SPSB1)

hsa-miR-186-5p

0.836520742084212

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

230-251

0.00606992928943736

Position on chromosome:

1:9427865-9427886

Conserved species:

panTro2,rheMac2,canFam2,galGal3

Binding area:

(Transcript)	5'	GCAUGCC_____UAUACAACCCC______	3'
		_______GUCCG___________UCUUUG
		_______\|.\|\|.___________\|\|\|\|\|\|
		_______CGGGU___________AGAAAC
(miRNA)	3'	______U_____UUUCCUCUUA_______	5'

UTR3

7mer

592-614

0.0193966657092354

Position on chromosome:

1:9428227-9428249

Conserved species:

panTro2,rheMac2,rn4,mm9,bosTau4,canFam2,dasNov2,loxAfr3,monDom5

Binding area:

(Transcript)	5'	GGUGC____UACCCUGUAUUU_______U	3'
		_____CCCG____________AUUCUUU_
		_____\|\|\|.____________\|\|\|\|\|\|\|_
		_____GGGU____________UAAGAAA_
(miRNA)	3'	____C____UUUCCUCU___________C	5'

UTR3

7mer

1357-1374

0.00523340132967058

Position on chromosome:

1:9428992-9429009

Conserved species:

panTro2,rheMac2,galGal3

Binding area:

(Transcript)	5'	CACCUGCCACC____UUGCCAU__________	3'
		___________GCCU__________UUCUUUG
		___________\|\|\|.__________\|\|\|\|\|\|\|
		___________CGGG__________AAGAAAC
(miRNA)	3'	__________U____UUUUCCUCUU_______	5'

UTR3

6mer

1825-1845

0.00668834502560119

Position on chromosome:

1:9429460-9429480

Conserved species:

panTro2,rheMac2,canFam2,dasNov2,loxAfr3

Binding area:

(Transcript)	5'	CCUGGGA___UCGACCCCACCC______C	3'
		_______CCC____________UUCUUU_
		_______\|\|\|____________\|\|\|\|\|\|_
		_______GGG____________AAGAAA_
(miRNA)	3'	______C___UUUUCCUCUU________C	5'

ENSG00000171621 (SPSB1)

hsa-miR-1914-3p

0.831494214606101

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

7mer

228-248

0.0152328220211463

Position on chromosome:

1:9427863-9427883

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	CCUGCAUG__G____UAUACA_________	3'
		________CC_UCCG_______ACCCCUCU
		________\|\|_.\|\|._______\|\|\|\|\|\|\|.
		________GG_GGGU_______UGGGGAGG
(miRNA)	3'	__________A____CACGCCC________	5'

UTR3

6mer

660-677

0.00223474308450749

Position on chromosome:

1:9428295-9428312

Conserved species:

panTro2,rheMac2,canFam2

Binding area:

(Transcript)	5'	AGAAAGGAAAC___GU___________________	3'
		___________CCU__UUCAGU______CCCCUCU
		___________\|\|\|__..\|\|\|\|______\|\|\|\|\|\|.
		___________GGA__GGGUCA______GGGGAGG
(miRNA)	3'	______________________CGCCCU_______	5'

UTR3

6mer

699-717

0.00117208979050401

Position on chromosome:

1:9428334-9428352

Conserved species:

panTro2,rheMac2,dasNov2,loxAfr3

Binding area:

(Transcript)	5'	CUGUUACUUU_______CCU____UG______	3'
		__________CCUUCCA______G__CCCUCC
		__________\|\|\|.\|\|\|______\|__\|\|\|\|\|\|
		__________GGAGGGU______C__GGGAGG
(miRNA)	3'	_________________CACGCC_UG______	5'

UTR3

6mer

732-746

0.00106888320135657

Position on chromosome:

1:9428367-9428381

Conserved species:

panTro2,rheMac2,loxAfr3

Binding area:

(Transcript)	5'	CUGGGAUAUGUAUG___CG___________________	3'
		______________CCU__CCCG_________CCCUCC
		______________\|\|\|__\|\|\|._________\|\|\|\|\|\|
		______________GGA__GGGU_________GGGAGG
(miRNA)	3'	_______________________CACGCCCUG______	5'

UTR3

7mer

1241-1263

0.0040759931551977

Position on chromosome:

1:9428876-9428898

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UAACAG________UCAUCCCA________	3'
		______C_CCCAGU________ACCCCUCU
		______\|_\|\|\|\|\|\|________\|\|\|\|\|\|\|.
		______G_GGGUCA________UGGGGAGG
(miRNA)	3'	_____G_A______CGCCC___________	5'

UTR3

8mer

1308-1329

0.0083254352685637

Position on chromosome:

1:9428943-9428964

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	AGGGGUG__CUA____U____A__________	3'
		_______CC___UCCC_G_GC___ACCCCUCC
		_______\|\|___\|\|\|\|_\|_\|\|___\|\|\|\|\|\|\|\|
		_______GG___AGGG_C_CG___UGGGGAGG
(miRNA)	3'	________________U_A__CCC________	5'

UTR3

6mer

1676-1688

0.00468491064648922

Position on chromosome:

1:9429311-9429323

Conserved species:

panTro2,rheMac2,dasNov2

Binding area:

(Transcript)	5'	GUAAGACUUUUAAAGA______________________	3'
		________________UUUUCC_________UCCCUCC
		________________..\|.\|\|_________.\|\|\|\|\|\|
		________________GGAGGG_________GGGGAGG
(miRNA)	3'	______________________UCACGCCCU_______	5'

ENSG00000171621 (SPSB1)

hsa-miR-1277-5p

0.828763064131241

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer+mismatch

1466-1483

0.0057901864219251

Position on chromosome:

1:9429101-9429118

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	GUUUAAUAUAU____A______________	3'
		___________AUAC_UACAUAUAUAUAU_
		___________\|\|\|\|_\|\|\|\|\|\|\|\|\|\|\|\|\|_
		___________UAUG_AUGUAUAUAUAUA_
(miRNA)	3'	_______________C_____________U	5'

UTR3

8mer+mismatch

1466-1485

0.00441691329751918

Position on chromosome:

1:9429101-9429120

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UUAAUAUAU____A________________	3'
		_________AUAC_UACAUAUAUAUAUAU_
		_________\|\|\|\|_\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|_
		_________UAUG_AUGUAUAUAUAUAUA_
(miRNA)	3'	_____________C_______________U	5'

UTR3

9mer

1462-1487

0.0149571224699939

Position on chromosome:

1:9429097-9429122

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	AAU____A_____AC______________	3'
		___AUAU_UACAU__AUAUAUAUAUAUUU
		___\|\|\|._\|\|\|\|\|__\|\|\|\|\|\|\|\|\|\|\|\|\|\|
		___UAUG_AUGUA__UAUAUAUAUAUAAA
(miRNA)	3'	_______C_____________________	5'

UTR3

7mer

1546-1562

0.0113141030803163

Position on chromosome:

1:9429181-9429197

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	UUAAGUAAAUCU________GA_________	3'
		____________UACA_GUG___GUAUAUUU
		____________\|\|\|\|_.\|.___.\|\|\|\|\|\|\|
		____________AUGU_UAU___UAUAUAAA
(miRNA)	3'	___________C____A___AUA________	5'

ENSG00000171621 (SPSB1)

hsa-miR-135b-5p

0.825598743088022

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

81-107

0.00251877675201134

Position on chromosome:

1:9427716-9427742

Conserved species:

panTro2,rheMac2,mm9

Binding area:

(Transcript)	5'	UG___CUU___CC__CAUCCGU_______	3'
		__CAC___GGA__GG_______AGCCAUG
		__\|\|\|___\|\|\|__\|._______\|\|\|\|\|\|.
		__GUG___CCU__CU_______UCGGUAU
(miRNA)	3'	_A___UAU___UA__UU____________	5'

UTR3

8mer

625-633

0.033597759432034

Position on chromosome:

1:9428260-9428268

Conserved species:

panTro2,rheMac2,bosTau4,canFam2,dasNov2,loxAfr3

Binding area:

(Transcript)	5'	UUAUUCUUUUAACAAUAAC_________U	3'
		___________________AAAAGCCAU_
		___________________\|\|\|\|\|\|\|\|\|_
		___________________UUUUCGGUA_
(miRNA)	3'	__________________C_________U	5'

ENSG00000171621 (SPSB1)

hsa-miR-4316

0.821126872770122

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

503-517

0.00390947606210996

Position on chromosome:

1:9428138-9428152

Conserved species:

panTro2,rheMac2,bosTau4

Binding area:

(Transcript)	5'	GAUAAAGCUCAGGA_____AAAA________	3'
		______________CGUCA______CUCACC
		______________\|..\|\|______\|\|\|\|\|\|
		______________GUGGU______GAGUGG
(miRNA)	3'	___________________CGAUCG______	5'

UTR3

8mer

846-865

0.0204290290204429

Position on chromosome:

1:9428481-9428500

Conserved species:

panTro2,rheMac2,canFam2

Binding area:

(Transcript)	5'	CGGGCCCC____GGAGAAA_________G	3'
		________UCAG_______UAGCCUCAC_
		________.\|\|\|_______\|\|\|\|\|\|\|\|\|_
		________GGUC_______AUCGGAGUG_
(miRNA)	3'	_______U____G_______________G	5'

UTR3

8mer

1157-1180

0.00904468961104528

Position on chromosome:

1:9428792-9428815

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	GAAG_____GAGCAGAGUCG________A	3'
		____ACCAG___________AGCCUCAC_
		____\|\|\|\|\|___________\|\|\|\|\|\|\|\|_
		____UGGUC___________UCGGAGUG_
(miRNA)	3'	___G_____GA_________________G	5'

UTR3

6mer

1753-1767

0.00223077663518041

Position on chromosome:

1:9429388-9429402

Conserved species:

panTro2,rn4

Binding area:

(Transcript)	5'	CUUAUGGCCUUGA_______CGU______A	3'
		_____________C_CCAGC___CCUCAC_
		_____________\|_\|\|\|\|\|___\|\|\|\|\|\|_
		_____________G_GGUCG___GGAGUG_
(miRNA)	3'	______________U_____AUC______G	5'

ENSG00000171621 (SPSB1)

hsa-miR-500b-3p

0.820961355395871

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

309-325

0.00252437884638597

Position on chromosome:

1:9427944-9427960

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	CUCCAAUCUGCU______GG___A________	3'
		____________CGGGGU____G_C_GGGUGC
		____________\|.\|..\|____\|_\|_\|\|\|\|\|\|
		____________GUCUUA____C_G_CCCACG
(miRNA)	3'	__________________GGAA_G_A______	5'

UTR3

7mer

852-879

0.00454280426823345

Position on chromosome:

1:9428487-9428514

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	_____AUAG___CACG___AAU_______U	3'
		_AGAA____CCU____UGC___CUGGGUG_
		_\|\|\|\|____\|\|\|____\|\|\|___\|\|\|\|\|\|\|_
		_UCUU____GGA____ACG___GACCCAC_
(miRNA)	3'	G____A_______________________G	5'

UTR3

7mer

1048-1072

0.0029044342379576

Position on chromosome:

1:9428683-9428707

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	CCA__UGC_____CAGAA__U_______U	3'
		___AG___AUCCU_____GC_CUGGGUG_
		___\|\|___\|\|\|\|\|_____\|\|_\|\|\|\|\|\|\|_
		___UC___UAGGA_____CG_GACCCAC_
(miRNA)	3'	__G__U_______A______________G	5'

UTR3

6mer

1281-1308

0.00169838021169929

Position on chromosome:

1:9428916-9428943

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	G___C____GGC____GGAAGAGAG______	3'
		_UAG___UC___UGCC_________GGGUGC
		_.\|\|___.\|___\|\|\|\|_________\|\|\|\|\|\|
		_GUC___GG___ACGG_________CCCACG
(miRNA)	3'	____UUA__A______A______________	5'

UTR3

7mer

1579-1595

0.0239255623075108

Position on chromosome:

1:9429214-9429230

Conserved species:

rheMac2,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,galGal3

Binding area:

(Transcript)	5'	AGCACAAAAUU__UG___AA_A_______A	3'
		___________GG___CC__G_CUGGGUG_
		___________.\|___\|\|__\|_\|\|\|\|\|\|\|_
		___________UC___GG__C_GACCCAC_
(miRNA)	3'	__________G__UUA__AA_G_______G	5'

ENSG00000171621 (SPSB1)

hsa-miR-6133

0.819613970517553

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

7mer

117-132

0.0069590617122405

Position on chromosome:

1:9427752-9427767

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	CAUGGACAGAGGU___UGG___________	3'
		_____________CCC____UCUUCCCUCA
		_____________\|\|\|____\|\|.\|\|\|\|\|\|\|
		_____________GGG____AGGAGGGAGU
(miRNA)	3'	____________U___UUGG__________	5'

UTR3

6mer

824-848

0.00136739755717595

Position on chromosome:

1:9428459-9428483

Conserved species:

panTro2,oryCun2,canFam2

Binding area:

(Transcript)	5'	CUGC_____G____CUAGCGGGC______	3'
		____UCCAA_UUCC_________CCCUCA
		____.\|\|\|\|_.\|\|\|_________\|\|\|\|\|\|
		____GGGUU_GAGG_________GGGAGU
(miRNA)	3'	___U_____G____A______________	5'

UTR3

8mer

1665-1687

0.0263974082277004

Position on chromosome:

1:9429300-9429322

Conserved species:

panTro2,rheMac2,dasNov2

Binding area:

(Transcript)	5'	GUAAG____UUAAAGAU___________C	3'
		_____ACUU________UUUCCUCCCUC_
		_____\|\|..________..\|\|\|\|\|\|\|\|\|_
		_____UGGG________GGAGGAGGGAG_
(miRNA)	3'	____A____UU_________________U	5'

UTR3

7mer

778-798

0.00460976155849434

Position on chromosome:

1:9427591-9427611

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	CCACACGC____G_UG__GG_________	3'
		________UGCC_C__CC__CUUCCCUCA
		________\|.\|\|_\|__\|\|__\|.\|\|\|\|\|\|\|
		________AUGG_G__GG__GGAGGGAGU
(miRNA)	3'	______________UU__A__________	5'

ENSG00000171621 (SPSB1)

hsa-let-7c-3p

0.819341321278153

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

1585-1606

0.00446731696508717

Position on chromosome:

1:9429220-9429241

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	GGUGCC___A_____UG__AAA______U	3'
		______AAG_CUGGG__AG___UGUACA_
		______\|\|\|_\|\|.\|.__\|\|___\|\|\|\|\|\|_
		______UUC_GAUCU__UC___ACAUGU_
(miRNA)	3'	_____U_____________CA_______C	5'

UTR3

8mer

1714-1732

0.00935466058626414

Position on chromosome:

1:9429349-9429367

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	ACAUUCUGAU___U___UCCC__________	3'
		__________GAA_GUU______UUGUACAG
		__________\|\|\|_\|.\|______\|\|\|\|\|\|\|\|
		__________CUU_CGA______AACAUGUC
(miRNA)	3'	_________C___U___UCUUCC________	5'

UTR3

8mer

1857-1877

0.0215940748985966

Position on chromosome:

1:9429492-9429512

Conserved species:

panTro2,rheMac2,dasNov2,loxAfr3,galGal3

Binding area:

(Transcript)	5'	ACCAGCCC_____CUUGU__C________	3'
		________AGAGC_____GG_UUGUACAG
		________\|.\|\|\|_____\|\|_\|\|\|\|\|\|\|\|
		________UUUCG_____CC_AACAUGUC
(miRNA)	3'	_______C_____AUCUU___________	5'