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| | | Ensembl Gene Id | miRNA name | miTG score | Also Predicted | | | | | | | | 1 | ENSG00000157823 (AP3S2) | hsa-miR-6776-5p | 0.973839529984511 |   | |  | | | | Gene details  | | loading... | | | miRNA details | | loading... | |
pubMed links: miRNA | gene | both
UCSC graphic | | | | | 2 | ENSG00000157823 (AP3S2) | hsa-miR-4727-5p | 0.921332517915001 | | | | | | | | Gene details | | loading... | | | miRNA details | | loading... | |
pubMed links: miRNA | gene | both
UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 6mer | 4389-4406 | 0.00518858612428221 | 2 | | | | | | | | | | | Position on chromosome: | 15:90378220-90378237 | | Conserved species: | panTro2,canFam2 | | Binding area: | | (Transcript) | 5' | GGUGUGGUGA____C____AAG______A | 3' | | | __________GUGG_AAGU___GGCAGA_ | | | | __________||||_|||.___||||||_ | | | | __________CACC_UUCG___CCGUCU_ | | | (miRNA) | 3' | _________A_________A________A | 5' |
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| | | | | | | | | UTR3 | 8mer | 3034-3056 | 0.0112782718140915 | 2 | | | | | | | | | | | Position on chromosome: | 15:90376865-90376887 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | GGGGU____UUUUCUUUUUU________C | 3' | | | _____UGGA___________CUGGCAGA_ | | | | _____||||___________||||||||_ | | | | _____ACCU___________GACCGUCU_ | | | (miRNA) | 3' | ____C____UC_________________A | 5' |
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| | | | | | | | | UTR3 | 7mer | 2128-2154 | 0.000955353102970771 | 2 | | | | | | | | | | | Position on chromosome: | 15:90375959-90375985 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | AG____UUG______CGAGGCG_______ | 3' | | | __CACU___GGAGGC_______GGCAGAU | | | | __||||___|||.||_______||||||| | | | | __GUGA___CCUUCG_______CCGUCUA | | | (miRNA) | 3' | _G____CA_______A_____________ | 5' |
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| | | | | | | | | UTR3 | 6mer | 1973-1985 | 0.000615998438736591 | 1 | | | | | | | | | | | Position on chromosome: | 15:90375804-90375816 | | Conserved species: | rheMac2 | | Binding area: | | (Transcript) | 5' | GGAGAAUGGCAUGAA____G_______________G | 3' | | | _______________CC_C___GGA____GGCAGA_ | | | | _______________||_|___|||____||||||_ | | | | _______________GG_G___CCU____CCGUCU_ | | | (miRNA) | 3' | _________________U_ACA___UCGA______A | 5' |
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| | | | | | | | | UTR3 | 8mer | 806-833 | 0.00932256676041825 | 2 | | | | | | | | | | | Position on chromosome: | 15:90374637-90374664 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | ___GA_____UUUGUC__CUC________C | 3' | | | CCA__G_GGA______AG___CUGGCAGA_ | | | | |||__|_|||______||___||||||||_ | | | | GGU__C_CCU______UC___GACCGUCU_ | | | (miRNA) | 3' | ___GA_A______________________A | 5' |
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| | | | | | | | | UTR3 | 8mer | 594-612 | 0.0235607794908401 | 3 | | | | | | | | | | | Position on chromosome: | 15:90374425-90374443 | | Conserved species: | panTro2,rheMac2,dasNov2 | | Binding area: | | (Transcript) | 5' | UCUGCGUGUU_____________________ | 3' | | | __________UCA__GUGGAAGUUGGCAGAU | | | | __________.||__|||||||.|||||||| | | | | __________GGU__CACCUUCGACCGUCUA | | | (miRNA) | 3' | _____________GA________________ | 5' |
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| | | | | 3 | ENSG00000157823 (AP3S2) | hsa-miR-3978 | 0.917914418391575 | | | | | | | | Gene details | | loading... | | | miRNA details | | loading... | |
pubMed links: miRNA | gene | both
UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 6mer | 3357-3379 | 0.00126228038001056 | 2 | | | | | | | | | | | Position on chromosome: | 15:90377188-90377210 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | UGAGG__UG___C_________AAAG______G | 3' | | | _____GC__CUU____GCA_GU____UUUCCA_ | | | | _____.|__|.|____|||_|.____||||||_ | | | | _____UG__GGA____CGU_CG____AAAGGU_ | | | (miRNA) | 3' | _______UG___CCUA___A____________G | 5' |
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| | | | | | | | | UTR3 | 8mer | 2240-2266 | 0.00259020905289366 | 1 | | | | | | | | | | | Position on chromosome: | 15:90376071-90376097 | | Conserved species: | panTro2 | | Binding area: | | (Transcript) | 5' | G_UG____CAA__U__GCUA________G | 3' | | | _U__CCUG___AU_CA____GCUUUCCA_ | | | | _.__||||___||_||____||||||||_ | | | | _G__GGAC___UA_GU____CGAAAGGU_ | | | (miRNA) | 3' | U_UG____C____C__A___________G | 5' |
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| | | | | | | | | UTR3 | 8mer | 938-959 | 0.017983794695587 | 2 | | | | | | | | | | | Position on chromosome: | 15:90374769-90374790 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | AGCGUG__UG____UCCAU__________A | 3' | | | ______GC__UCUG______UGCUUUCCA_ | | | | ______.|__.|||______|||||||||_ | | | | ______UG__GGAC______ACGAAAGGU_ | | | (miRNA) | 3' | ________UG____CUACGU_________G | 5' |
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| | | | | | | | | UTR3 | 7mer | 539-564 | 0.0218487958557846 | 3 | | | | | | | | | | | Position on chromosome: | 15:90374370-90374395 | | Conserved species: | panTro2,rheMac2,mm9 | | Binding area: | | (Transcript) | 5' | GU___A__AAAAU___UA__U_______A | 3' | | | __UCC_UG_____GAU__AU_CUUUCCA_ | | | | __.||_||_____|||__||_|||||||_ | | | | __GGG_AC_____CUA__UA_GAAAGGU_ | | | (miRNA) | 3' | _U______________CG__C_______G | 5' |
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| | | | | | | | | UTR3 | 6mer | 373-399 | 0.00576014560127764 | 4 | | | | | | | | | | | Position on chromosome: | 15:90374204-90374230 | | Conserved species: | panTro2,rheMac2,bosTau4,loxAfr3 | | Binding area: | | (Transcript) | 5' | C__U______UA___AGAAG_________A | 3' | | | _CA_CCCUGG__GCA_____UG_UUUCCA_ | | | | _||_||||||__|||_____||_||||||_ | | | | _GU_GGGACC__CGU_____AC_AAAGGU_ | | | (miRNA) | 3' | U_________UA__________G______G | 5' |
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| | | | | | | | | UTR3 | 7mer | 471-498 | 0.00926267809247666 | 0 | | | | | | | | | | | Position on chromosome: | 15:90432331-90432358 | | Conserved species: | Not Conserved | | Binding area: | | (Transcript) | 5' | A___G_A____U___UCGAGAGA________ | 3' | | | _ACA_C___GA_UGU________CUUUCCAU | | | | _|||_|___||_||.________|||||||. | | | | _UGU_G___CU_ACG________GAAAGGUG | | | (miRNA) | 3' | ____G_GAC______UAC_____________ | 5' |
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| | | | | 4 | ENSG00000157823 (AP3S2) | hsa-miR-6734-3p | 0.917546678996116 | | | | | | | | Gene details | | loading... | | | miRNA details | | loading... | |
pubMed links: miRNA | gene | both
UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 9mer | 4755-4779 | 0.0500860529839171 | 1 | | | | | | | | | | | Position on chromosome: | 15:90378586-90378610 | | Conserved species: | panTro2 | | Binding area: | | (Transcript) | 5' | AAGA___UUU__CAU___AU__________ | 3' | | | ____CUG___GG___GGA___AGGGAAGGG | | | | ____|||___|.___.||___||||||||| | | | | ____GAC___CU___UCU___UCCCUUCCC | | | (miRNA) | 3' | _______U____CU____CAC_________ | 5' |
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| | | | | 5 | ENSG00000157823 (AP3S2) | hsa-miR-6506-5p | 0.910251289264336 | | | | | | | | Gene details | | loading... | | | miRNA details | | loading... | |
pubMed links: miRNA | gene | both
UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 6mer | 4552-4578 | 0.00442901449590577 | 5 | | | | | | | | | | | Position on chromosome: | 15:90378383-90378409 | | Conserved species: | panTro2,rheMac2,rn4,mm9,bosTau4 | | Binding area: | | (Transcript) | 5' | G___UGAG___GCC__CCUGCU______A | 3' | | | _CAU____CAG___CA______UCCCAG_ | | | | _|||____|||___||______||||||_ | | | | _GUA____GUC___GU______AGGGUC_ | | | (miRNA) | 3' | G___UAA____ACU______________A | 5' |
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| | | | | | | | | UTR3 | 7mer | 3938-3958 | 0.00605147131132874 | 2 | | | | | | | | | | | Position on chromosome: | 15:90377769-90377789 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | UAUGCUUC___C___GUCCUA_________ | 3' | | | ________CCG_AUU_______GUCCCAGU | | | | ________||._|||_______.||||||| | | | | ________GGU_UAA_______UAGGGUCA | | | (miRNA) | 3' | _______U___A___GUCACUG________ | 5' |
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| | | | | | | | | UTR3 | 8mer | 3753-3769 | 0.0174073308449837 | 3 | | | | | | | | | | | Position on chromosome: | 15:90377584-90377600 | | Conserved species: | panTro2,rheMac2,oryCun2 | | Binding area: | | (Transcript) | 5' | AAAGCUGACAA__U___AA_________A | 3' | | | ___________CA_GUG__ACAUCCCAG_ | | | | ___________||_|||__|||||||||_ | | | | ___________GU_CAC__UGUAGGGUC_ | | | (miRNA) | 3' | __________A_________________A | 5' |
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| | | | | | | | | UTR3 | 6mer | 3489-3510 | 0.00133616439421549 | 4 | | | | | | | | | | | Position on chromosome: | 15:90377320-90377341 | | Conserved species: | panTro2,rheMac2,dasNov2,echTel1 | | Binding area: | | (Transcript) | 5' | UCUGUU__C______G___C__UUC______G | 3' | | | ______CC____UCA_GUG_CA___UCCCAG_ | | | | ______||____|||_|||_||___||||||_ | | | | ______GG____AGU_CAC_GU___AGGGUC_ | | | (miRNA) | 3' | _____U__UAUA_______U___________A | 5' |
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| | | | | | | | | UTR3 | 7mer | 2155-2179 | 0.00526872365382695 | 2 | | | | | | | | | | | Position on chromosome: | 15:90375986-90376010 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | GUG_______UCACGCCUGUA_______C | 3' | | | ___CGGUGGC___________AUCCCAG_ | | | | ___|.|||.|___________|||||||_ | | | | ___GUCACUG___________UAGGGUC_ | | | (miRNA) | 3' | __A_________________________A | 5' |
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| | | | | | | | | UTR3 | 6mer | 2021-2048 | 0.00092044420663548 | 2 | | | | | | | | | | | Position on chromosome: | 15:90375852-90375879 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | ______G_______ACACCUGUA_______C | 3' | | | _CCGUG__UAGUGG_________GUCCCAG_ | | | | _||.|.__.||||._________.||||||_ | | | | _GGUAU__GUCACU_________UAGGGUC_ | | | (miRNA) | 3' | U_____AA______G_______________A | 5' |
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| | | | | | | | | UTR3 | 6mer | 830-853 | 0.00236701799421074 | 2 | | | | | | | | | | | Position on chromosome: | 15:90374661-90374684 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | GAGA___UCUGA___UA___GA_______A | 3' | | | ____GCC______AG__UGA__GUCCCAG_ | | | | ____.||______||__|||__.||||||_ | | | | ____UGG______UC__ACU__UAGGGUC_ | | | (miRNA) | 3' | _______UAUAAG_______G________A | 5' |
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| | | | | | | | | UTR3 | 6mer | 730-754 | 0.00156956346566321 | 2 | | | | | | | | | | | Position on chromosome: | 15:90374561-90374585 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | AGUC___C____________GUUAG______ | 3' | | | ____UCA_UGU__GGUGAUG_____CCCAGU | | | | ____.||_|.|__.||||.._____|||||| | | | | ____GGU_AUA__UCACUGU_____GGGUCA | | | (miRNA) | 3' | ___U_______AG_______A__________ | 5' |
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| | | | | | | | | UTR3 | 8mer | 57-79 | 0.00922019103250169 | 2 | | | | | | | | | | | Position on chromosome: | 15:90373888-90373910 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | UUGUC____________CU_________C | 3' | | | _____UCGUGUUCAGUG__GCAUCCCAG_ | | | | _____.|.|.|||||||__.||||||||_ | | | | _____GGUAUAAGUCAC__UGUAGGGUC_ | | | (miRNA) | 3' | ____U_______________________A | 5' |
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| | | | | 6 | ENSG00000157823 (AP3S2) | hsa-miR-2861 | 0.907129389965533 | | | | | | | | Gene details | | loading... | | | miRNA details | | loading... | |
pubMed links: miRNA | gene | both
UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 7mer | 4565-4581 | 0.00567945025655905 | 2 | | | | | | | | | | | Position on chromosome: | 15:90378396-90378412 | | Conserved species: | panTro2,loxAfr3 | | Binding area: | | (Transcript) | 5' | AGGGUUAGGGA__________AG_______A | 3' | | | ___________CUGC__AUUG__CAGGCCC_ | | | | ___________|.||__|..|__|||||||_ | | | | ___________GGCG__UGGC__GUCCGGG_ | | | (miRNA) | 3' | _______________GG____G________G | 5' |
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| | | | | | | | | UTR3 | 6mer | 3346-3373 | 0.000713688881096635 | 2 | | | | | | | | | | | Position on chromosome: | 15:90377177-90377204 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | U____AGUAAAGUUU__A___U_______ | 3' | | | _UCGC__________CC_GCC_GGGCCCC | | | | _.|||__________||_|||_.|||||| | | | | _GGCG__________GG_CGG_UCCGGGG | | | (miRNA) | 3' | _____GGU_____________________ | 5' |
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| | | | | | | | | UTR3 | 8mer | 579-602 | 0.041561772849441 | 3 | | | | | | | | | | | Position on chromosome: | 15:90374410-90374433 | | Conserved species: | panTro2,rheMac2,canFam2 | | Binding area: | | (Transcript) | 5' | GGAAG___G_AGAUA__AAAA________ | 3' | | | _____UUG_C_____CG____CAGGCCCC | | | | _____..|_|_____||____|||||||| | | | | _____GGC_G_____GC____GUCCGGGG | | | (miRNA) | 3' | ________G_GUG____G___________ | 5' |
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| | | | | 7 | ENSG00000157823 (AP3S2) | hsa-miR-497-3p | 0.901482217222948 | | | | | | | | Gene details | | loading... | | | miRNA details | | loading... | |
pubMed links: miRNA | gene | both
UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 8mer | 4310-4317 | 0.0284447668637559 | 2 | | | | | | | | | | | Position on chromosome: | 15:90378141-90378148 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | AGAAUCCUUUUGUGUUUUUU________U | 3' | | | ____________________UGUGGUUU_ | | | | ____________________||||||||_ | | | | ____________________ACACCAAA_ | | | (miRNA) | 3' | ___________________C________C | 5' |
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| | | | | | | | | UTR3 | 6mer | 3697-3721 | 0.00142805686224733 | 1 | | | | | | | | | | | Position on chromosome: | 15:90377528-90377552 | | Conserved species: | panTro2 | | Binding area: | | (Transcript) | 5' | ACAU___CCUC_UG_GA____AA_______ | 3' | | | ____UCU____A__A__GCAG___GGUUUG | | | | ____|||____|__|__.|||___|||||| | | | | ____AGA____U__U__UGUC___CCAAAC | | | (miRNA) | 3' | ____________UG_GG____ACA______ | 5' |
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| | | | | | | | | UTR3 | 9mer | 3215-3235 | 0.00452698799069638 | 2 | | | | | | | | | | | Position on chromosome: | 15:90377046-90377066 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | CAUUUUUG____G___UCCC_________ | 3' | | | ________AACA_CGC____UGUGGUUUG | | | | ________||||_|.|____||||||||| | | | | ________UUGU_GUG____ACACCAAAC | | | (miRNA) | 3' | _______A____G___UC___________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 2510-2533 | 0.00676540051240581 | 3 | | | | | | | | | | | Position on chromosome: | 15:90376341-90376364 | | Conserved species: | panTro2,rheMac2,canFam2 | | Binding area: | | (Transcript) | 5' | CUUC____GU___UUU__UAC_______A | 3' | | | ____UUGA__UCG___GU___GUGGUUU_ | | | | ____.|.|__.|.___||___|||||||_ | | | | ____GAUU__GGU___CA___CACCAAA_ | | | (miRNA) | 3' | ___A____GU___GU_____________C | 5' |
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| | | | | | | | | UTR3 | 6mer | 2423-2447 | 0.00118231212207989 | 2 | | | | | | | | | | | Position on chromosome: | 15:90376254-90376278 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | UGU____C_UG_____AAACCAA______U | 3' | | | ___UUUG_C__C_CAG_______UGGUUU_ | | | | ___|.|._|__|_|||_______||||||_ | | | | ___AGAU_G__G_GUC_______ACCAAA_ | | | (miRNA) | 3' | _______U_UG_U___AC___________C | 5' |
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| | | | | | | | | UTR3 | 6mer | 140-163 | 0.00454054262032119 | 2 | | | | | | | | | | | Position on chromosome: | 15:90373971-90373994 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | GCAC________A_UG_A__UU______C | 3' | | | ____UCUGACGU_C__G_UG__UGGUUU_ | | | | ____|||.||.._|__._||__||||||_ | | | | ____AGAUUGUG_G__U_AC__ACCAAA_ | | | (miRNA) | 3' | ______________UG_C__________C | 5' |
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| | | | | 8 | ENSG00000157823 (AP3S2) | hsa-miR-7113-5p | 0.899655844609964 | | | | | | | | Gene details | | loading... | | | miRNA details | | loading... | |
pubMed links: miRNA | gene | both
UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 6mer | 4800-4818 | 0.00291873145363584 | 0 | | | | | | | | | | | Position on chromosome: | 15:90378631-90378649 | | Conserved species: | Not Conserved | | Binding area: | | (Transcript) | 5' | CUUAGAAGAG___A_____CAGGA______ | 3' | | | __________UCA_GC_CU_____CCUGGA | | | | __________|||_.|_||_____|||||| | | | | __________AGU_UG_GA_____GGACCU | | | (miRNA) | 3' | _________G___G__U__CAGAG______ | 5' |
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| | | | | | | | | UTR3 | 6mer | 3590-3609 | 0.00095598796528782 | 2 | | | | | | | | | | | Position on chromosome: | 15:90377421-90377440 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | GAGCCAGGG______C____GGGG______ | 3' | | | _________UCAC_C_UUGU____CCUGGA | | | | _________||||_|_.|||____|||||| | | | | _________AGUG_G_GACA____GGACCU | | | (miRNA) | 3' | ________G____U_U____GAG_______ | 5' |
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| | | | | | | | | UTR3 | 7mer | 391-417 | 0.00975454166664014 | 4 | | | | | | | | | | | Position on chromosome: | 15:90374222-90374248 | | Conserved species: | panTro2,rheMac2,bosTau4,dasNov2 | | Binding area: | | (Transcript) | 5' | A______AGCCCCACCCCCCA_______U | 3' | | | _ACGCUG______________UCCCUGG_ | | | | _||.|||______________|||||||_ | | | | _UGUGAC______________AGGGACC_ | | | (miRNA) | 3' | G______AG___________________U | 5' |
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| | | | | | | | | UTR3 | 8mer | 343-363 | 0.0283661197261771 | 4 | | | | | | | | | | | Position on chromosome: | 15:90374174-90374194 | | Conserved species: | panTro2,rheMac2,canFam2,dasNov2 | | Binding area: | | (Transcript) | 5' | UUUUAAGG___AGAA___AAG__________ | 3' | | | ________UUA____ACA_____UCCCUGGA | | | | ________|.|____|||_____|||||||| | | | | ________AGU____UGU_____AGGGACCU | | | (miRNA) | 3' | _______G___G______GACAG________ | 5' |
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| | | | | | | | | UTR3 | 6mer | 291-306 | 0.00224690716680391 | 2 | | | | | | | | | | | Position on chromosome: | 15:90374122-90374137 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | GAGUGGGUUGUG___________A________C | 3' | | | ____________UUC_CGU_UUG___CCCUGG_ | | | | ____________.||_|.._.||___||||||_ | | | | ____________GAG_GUG_GAC___GGGACC_ | | | (miRNA) | 3' | _______________U___U___AGA______U | 5' |
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| | | | | | | | | UTR3 | 6mer | 203-224 | 0.00231241496069359 | 2 | | | | | | | | | | | Position on chromosome: | 15:90374034-90374055 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | ACCCUG____G__GCACCCCAG______C | 3' | | | ______UACA_UG_________CCCUGG_ | | | | ______.|||_||_________||||||_ | | | | ______GUGU_AC_________GGGACC_ | | | (miRNA) | 3' | _____U____G__AGA____________U | 5' |
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| | | | | 9 | ENSG00000157823 (AP3S2) | hsa-miR-6788-5p | 0.890077942075662 | | | | | | | | Gene details | | loading... | | | miRNA details | | loading... | |
pubMed links: miRNA | gene | both
UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 6mer | 4593-4618 | 0.00298967415058892 | 2 | | | | | | | | | | | Position on chromosome: | 15:90378424-90378449 | | Conserved species: | rheMac2,bosTau4 | | Binding area: | | (Transcript) | 5' | AC_______U___ACAUGGAUG______A | 3' | | | __CUUUACC_CUC_________CUCCCA_ | | | | __|||.|||_|||_________||||||_ | | | | __GAAGUGG_GAG_________GAGGGU_ | | | (miRNA) | 3' | _A_______U___AA_____________C | 5' |
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| | | | | | | | | UTR3 | 6mer | 4552-4567 | 0.00268491140323735 | 4 | | | | | | | | | | | Position on chromosome: | 15:90378383-90378398 | | Conserved species: | panTro2,rheMac2,rn4,mm9 | | Binding area: | | (Transcript) | 5' | UGCAUUGAGCAGG_________GC_______ | 3' | | | _____________C_CCAC_CU__UUCCCAG | | | | _____________|_||||_||__.|||||| | | | | _____________G_GGUG_GA__GAGGGUC | | | (miRNA) | 3' | ____________A_U____A__A________ | 5' |
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| | | | | | | | | UTR3 | 6mer | 4057-4077 | 0.00193762697179261 | 2 | | | | | | | | | | | Position on chromosome: | 15:90377888-90377908 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | CAAGUGA___A__________GGC______A | 3' | | | _______UCU_C_CCGC_CUU___CUCCCA_ | | | | _______|||_|_||.|_|||___||||||_ | | | | _______AGA_G_GGUG_GAA___GAGGGU_ | | | (miRNA) | 3' | __________A_U____A____________C | 5' |
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| | | | | | | | | UTR3 | 6mer | 3939-3962 | 0.00181982297149676 | 3 | | | | | | | | | | | Position on chromosome: | 15:90377770-90377793 | | Conserved species: | panTro2,rheMac2,loxAfr3 | | Binding area: | | (Transcript) | 5' | AUAUG_________AUUGUC__AG______ | 3' | | | _____CUUC_CCGC______CU__UCCCAG | | | | _____||||_||.|______||__|||||| | | | | _____GAAG_GGUG______GA__AGGGUC | | | (miRNA) | 3' | ____A____U____A_______AG______ | 5' |
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| | | | | | | | | UTR3 | 6mer | 3753-3776 | 0.00326407548824148 | 3 | | | | | | | | | | | Position on chromosome: | 15:90377584-90377607 | | Conserved species: | panTro2,rheMac2,oryCun2 | | Binding area: | | (Transcript) | 5' | UAAAG__GA__A___GUGAAACA______ | 3' | | | _____CU__CA_CAU________UCCCAG | | | | _____||__||_||.________|||||| | | | | _____GA__GU_GUG________AGGGUC | | | (miRNA) | 3' | ____A__A___G___AGAAG_________ | 5' |
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| | | | | | | | | UTR3 | 9mer | 3489-3516 | 0.00455222183498536 | 4 | | | | | | | | | | | Position on chromosome: | 15:90377320-90377347 | | Conserved species: | panTro2,rheMac2,dasNov2,echTel1 | | Binding area: | | (Transcript) | 5' | C___GUU______AGGUGCCA_________ | 3' | | | _UCU___CC_CUC________UUCUCCCAG | | | | _|||___||_|||________||||||||| | | | | _AGA___GG_GAG________AAGAGGGUC | | | (miRNA) | 3' | ____AGU__U____________________ | 5' |
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| | | | | | | | | UTR3 | 8mer | 2764-2791 | 0.0149152769772912 | 3 | | | | | | | | | | | Position on chromosome: | 15:90376595-90376622 | | Conserved species: | panTro2,rheMac2,bosTau4 | | Binding area: | | (Transcript) | 5' | __C________UAAGAUGG_________A | 3' | | | UC_UCGCUGCU________CUUCUCCCA_ | | | | ||_||.|..||________|||||||||_ | | | | AG_AGUGGUGA________GAAGAGGGU_ | | | (miRNA) | 3' | __A_________________________C | 5' |
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| | | | | | | | | UTR3 | 6mer | 2155-2169 | 0.00115056504257788 | 2 | | | | | | | | | | | Position on chromosome: | 15:90375986-90376000 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | GGUGCGGUGGCUCA____UG_AA________ | 3' | | | ______________CGCC__U____UCCCAG | | | | ______________|.||__|____|||||| | | | | ______________GUGG__A____AGGGUC | | | (miRNA) | 3' | _____________A____UG_GAAG______ | 5' |
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| | | | | | | | | UTR3 | 6mer | 2021-2035 | 0.000770737260758175 | 2 | | | | | | | | | | | Position on chromosome: | 15:90375852-90375866 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | GCCGUGGUAGUGGA____UG_AG________ | 3' | | | ______________CACC__U____UCCCAG | | | | ______________||||__|____|||||| | | | | ______________GUGG__A____AGGGUC | | | (miRNA) | 3' | _____________A____UG_GAAG______ | 5' |
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| | | | | | | | | UTR3 | 6mer | 1603-1623 | 0.00115585410377526 | 2 | | | | | | | | | | | Position on chromosome: | 15:90375434-90375454 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | CAAGCCA__C___________GGC______A | 3' | | | _______UC_UC_CCGC_CUU___CUCCCA_ | | | | _______||_||_||.|_|||___||||||_ | | | | _______AG_AG_GGUG_GAA___GAGGGU_ | | | (miRNA) | 3' | _________A__U____A____________C | 5' |
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| | | | | | | | | UTR3 | 6mer | 830-850 | 0.00273479795071042 | 2 | | | | | | | | | | | Position on chromosome: | 15:90374661-90374681 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | GGAGAGCC___GA_G___GAGAG______ | 3' | | | ________UCU__A_UAU_____UCCCAG | | | | ________|||__|_.|._____|||||| | | | | ________AGA__U_GUG_____AGGGUC | | | (miRNA) | 3' | ___________AG_G___AGAAG______ | 5' |
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| | | | | | | | | UTR3 | 6mer | 432-453 | 0.00348235971555246 | 3 | | | | | | | | | | | Position on chromosome: | 15:90374263-90374284 | | Conserved species: | panTro2,bosTau4,loxAfr3 | | Binding area: | | (Transcript) | 5' | CAAAAG___GU___G__AAAGA______C | 3' | | | ______UCU__UCA_CA_____CUCCCA_ | | | | ______|||__|||_||_____||||||_ | | | | ______AGA__AGU_GU_____GAGGGU_ | | | (miRNA) | 3' | ______________G__GAGAA______C | 5' |
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| | | | | | | | | UTR3 | 6mer | 57-81 | 0.0034318375586387 | 4 | | | | | | | | | | | Position on chromosome: | 15:90373888-90373912 | | Conserved species: | panTro2,rheMac2,bosTau4,loxAfr3 | | Binding area: | | (Transcript) | 5' | CUUG______UGU___G_G__GCA______ | 3' | | | ____UC_UCG___UCA_U_CU___UCCCAG | | | | ____||_||.___.||_|_||___|||||| | | | | ____AG_AGU___GGU_A_GA___AGGGUC | | | (miRNA) | 3' | ______A_________G____AG_______ | 5' |
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| | | | | 10 | ENSG00000157823 (AP3S2) | hsa-miR-30c-2-3p | 0.889567115317437 | | | | | | | | Gene details | | loading... | | | miRNA details | | loading... | |
pubMed links: miRNA | gene | both
UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 6mer | 4593-4607 | 0.00417868373798575 | 2 | | | | | | | | | | | Position on chromosome: | 15:90378424-90378438 | | Conserved species: | rheMac2,bosTau4 | | Binding area: | | (Transcript) | 5' | ACCUUUACCUCUC___UGGAUG______A | 3' | | | _____________ACA______CUCCCA_ | | | | _____________|||______||||||_ | | | | _____________UGU______GAGGGU_ | | | (miRNA) | 3' | ____________U___CGGAA_______C | 5' |
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| | | | | | | | | UTR3 | 6mer | 4552-4575 | 0.00264117794051547 | 4 | | | | | | | | | | | Position on chromosome: | 15:90378383-90378406 | | Conserved species: | panTro2,rheMac2,rn4,mm9 | | Binding area: | | (Transcript) | 5' | UGCAU_______GCCCA___GC_______ | 3' | | | _____UGAGCAG_____CCU__UUCCCAG | | | | _____|.|.|||_____|||__.|||||| | | | | _____AUUUGUC_____GGA__GAGGGUC | | | (miRNA) | 3' | ____C_______________A________ | 5' |
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| | | | | | | | | UTR3 | 6mer | 4057-4082 | 0.00197562204950564 | 2 | | | | | | | | | | | Position on chromosome: | 15:90377888-90377913 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | CA_____UCU__CC_____GGC______A | 3' | | | __AGUGA___AC__GCCUU___CUCCCA_ | | | | __|||.|___||__|||||___||||||_ | | | | __UCAUU___UG__CGGAA___GAGGGU_ | | | (miRNA) | 3' | _C__________U_______________C | 5' |
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| | | | | | | | | UTR3 | 6mer | 3939-3949 | 0.00196867718207473 | 3 | | | | | | | | | | | Position on chromosome: | 15:90377770-90377780 | | Conserved species: | panTro2,rheMac2,loxAfr3 | | Binding area: | | (Transcript) | 5' | AUAUGCUUCCCGCAUUGU___AG______ | 3' | | | __________________CCU__UCCCAG | | | | __________________|||__|||||| | | | | __________________GGA__AGGGUC | | | (miRNA) | 3' | _________________C___AG______ | 5' |
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| | | | | | | | | UTR3 | 6mer | 3753-3763 | 0.00327321347468437 | 3 | | | | | | | | | | | Position on chromosome: | 15:90377584-90377594 | | Conserved species: | panTro2,rheMac2,oryCun2 | | Binding area: | | (Transcript) | 5' | UAAAGCUGACAACAUGUG_________________ | 3' | | | __________________AAACA______UCCCAG | | | | __________________|||||______|||||| | | | | __________________UUUGU______AGGGUC | | | (miRNA) | 3' | _________________A_____CGGAAG______ | 5' |
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| | | | | | | | | UTR3 | 9mer | 3489-3505 | 0.00454402327792992 | 4 | | | | | | | | | | | Position on chromosome: | 15:90377320-90377336 | | Conserved species: | panTro2,rheMac2,dasNov2,echTel1 | | Binding area: | | (Transcript) | 5' | CUCUGUUCCCUC__GU___A_________ | 3' | | | ____________AG__GCC_UUCUCCCAG | | | | ____________|.__|||_||||||||| | | | | ____________UU__CGG_AAGAGGGUC | | | (miRNA) | 3' | ___________U__GU_____________ | 5' |
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| | | | | | | | | UTR3 | 8mer | 2764-2778 | 0.0139289754996755 | 3 | | | | | | | | | | | Position on chromosome: | 15:90376595-90376609 | | Conserved species: | panTro2,rheMac2,bosTau4 | | Binding area: | | (Transcript) | 5' | UCCUCGCUGCUUA______G_________A | 3' | | | _____________AGAU_G_CUUCUCCCA_ | | | | _____________|.|._|_|||||||||_ | | | | _____________UUUG_C_GAAGAGGGU_ | | | (miRNA) | 3' | ____________A____U_G_________C | 5' |
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| | | | | | | | | UTR3 | 6mer | 2155-2178 | 0.0011400143811017 | 2 | | | | | | | | | | | Position on chromosome: | 15:90375986-90376009 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | GGUGC_____CU__C____GUAA______ | 3' | | | _____GGUGG__CA_GCCU____UCCCAG | | | | _____.||..__||_||||____|||||| | | | | _____UCAUU__GU_CGGA____AGGGUC | | | (miRNA) | 3' | ____C_____U________AG________ | 5' |
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| | | | | | | | | UTR3 | 6mer | 2021-2041 | 0.000706495497160328 | 2 | | | | | | | | | | | Position on chromosome: | 15:90375852-90375872 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | GCCGUGGU____________GUAG______ | 3' | | | ________AGUGGACA_CCU____UCCCAG | | | | ________|||..|||_|||____|||||| | | | | ________UCAUUUGU_GGA____AGGGUC | | | (miRNA) | 3' | _______C________C___AG________ | 5' |
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| | | | | | | | | UTR3 | 6mer | 1603-1616 | 0.0013214546150007 | 2 | | | | | | | | | | | Position on chromosome: | 15:90375434-90375447 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | CAAGCCAUCCUCCC_____GGC______A | 3' | | | ______________GCCUU___CUCCCA_ | | | | ______________|||||___||||||_ | | | | ______________CGGAA___GAGGGU_ | | | (miRNA) | 3' | _____________U______________C | 5' |
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| | | | | | | | | UTR3 | 6mer | 830-858 | 0.00249958767985274 | 2 | | | | | | | | | | | Position on chromosome: | 15:90374661-90374689 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | ______________C_GAAGUAUGAGAG______ | 3' | | | GGAG_____AGCCU_U____________UCCCAG | | | | .|||_____|||||_.____________|||||| | | | | UCUC_____UCGGA_G____________AGGGUC | | | (miRNA) | 3' | ____AUUUG_____A___________________ | 5' |
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| | | | | | | | | UTR3 | 6mer | 432-455 | 0.00350391167277601 | 3 | | | | | | | | | | | Position on chromosome: | 15:90374263-90374286 | | Conserved species: | panTro2,bosTau4,loxAfr3 | | Binding area: | | (Transcript) | 5' | CAAA__UCU__U______AAAAGA______C | 3' | | | ____AG___GU___CAGC______CUCCCA_ | | | | ____||___||___||||______||||||_ | | | | ____UC___CA___GUCG______GAGGGU_ | | | (miRNA) | 3' | ______U____UUU____GAA_________C | 5' |
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| | | | | | | | | UTR3 | 6mer | 57-77 | 0.00312276451851195 | 4 | | | | | | | | | | | Position on chromosome: | 15:90373888-90373908 | | Conserved species: | panTro2,rheMac2,bosTau4,loxAfr3 | | Binding area: | | (Transcript) | 5' | CUUGUCUC___UU____G__GCA______ | 3' | | | ________GUG__CAGU_CU___UCCCAG | | | | ________||.__|||._||___|||||| | | | | ________CAU__GUCG_GA___AGGGUC | | | (miRNA) | 3' | _______U___UU_______AG_______ | 5' |
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| | | | | 11 | ENSG00000157823 (AP3S2) | hsa-miR-4476 | 0.878267335083694 | | | | | | | | Gene details | | loading... | | | miRNA details | | loading... | |
pubMed links: miRNA | gene | both
UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 7mer | 4653-4678 | 0.00840910743224231 | 3 | | | | | | | | | | | Position on chromosome: | 15:90378484-90378509 | | Conserved species: | panTro2,rheMac2,oryCun2 | | Binding area: | | (Transcript) | 5' | CU__AGA___GAGGGG_______________C | 3' | | | __GC___UGU______CCCUG___CCUUCCU_ | | | | __||___|||______||||.___|||||||_ | | | | __CG___ACA______GGGAU___GGAAGGA_ | | | (miRNA) | 3' | ____G________________UUA_______C | 5' |
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| | | | | | | | | UTR3 | 7mer | 3118-3131 | 0.00197400689110144 | 1 | | | | | | | | | | | Position on chromosome: | 15:90376949-90376962 | | Conserved species: | panTro2 | | Binding area: | | (Transcript) | 5' | GUGUGGGUCAGAAGG__GG__G____________ | 3' | | | _______________UG__CC______CUUCCUG | | | | _______________||__||______||||||| | | | | _______________AC__GG______GAAGGAC | | | (miRNA) | 3' | ______________G__AG__AUUUAG_______ | 5' |
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| | | | | | | | | UTR3 | 8mer+wobble | 2788-2804 | 0.00343067269241861 | 2 | | | | | | | | | | | Position on chromosome: | 15:90376619-90376635 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | ACUUGACUCCA________U__________C | 3' | | | ___________CUGUCCUU___UCUUUCCU_ | | | | ___________||||||.|___||.|||||_ | | | | ___________GACAGGGA___AGGAAGGA_ | | | (miRNA) | 3' | __________G________UUU________C | 5' |
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| | | | | | | | | UTR3 | 6mer | 2470-2488 | 0.00166918139907796 | 6 | | | | | | | | | | | Position on chromosome: | 15:90376301-90376319 | | Conserved species: | panTro2,rheMac2,oryCun2,bosTau4,dasNov2,loxAfr3 | | Binding area: | | (Transcript) | 5' | GCAGGACAGC___UA_G______________ | 3' | | | __________CCU__U_CUAGA__UUUCCUG | | | | __________|||__._|||.|__.|||||| | | | | __________GGA__G_GAUUU__GAAGGAC | | | (miRNA) | 3' | _________C___CA_G_____AG_______ | 5' |
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| | | | | | | | | UTR3 | 7mer | 1224-1250 | 0.00366579636767013 | 2 | | | | | | | | | | | Position on chromosome: | 15:90375055-90375081 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | G___AUA___C___CAGCCCA_______C | 3' | | | _GCC___CCC_AAA_______CCUUCCU_ | | | | _|||___|||_|||_______|||||||_ | | | | _CGG___GGG_UUU_______GGAAGGA_ | | | (miRNA) | 3' | ____ACA___A___A_____________C | 5' |
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| | | | | | | | | UTR3 | 8mer | 784-810 | 0.0167208040410483 | 2 | | | | | | | | | | | Position on chromosome: | 15:90374615-90374641 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | UG__AGACA______UUUUCA________ | 3' | | | __GC_____UCCUGA______CCUUCCUG | | | | __||_____.|||.|______|||||||| | | | | __CG_____GGGAUU______GGAAGGAC | | | (miRNA) | 3' | ____GACA_______UA____________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 320-348 | 0.00713387484594377 | 3 | | | | | | | | | | | Position on chromosome: | 15:90374151-90374179 | | Conserved species: | panTro2,rheMac2,dasNov2 | | Binding area: | | (Transcript) | 5' | _____GAUUUG_G_____GAUG________ | 3' | | | _CCUG______U_UUAGG____UCUUCCUG | | | | _||||______._.||..____.||||||| | | | | _GGAC______G_GAUUU____GGAAGGAC | | | (miRNA) | 3' | C____A______G_____A___________ | 5' |
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| | | | | 12 | ENSG00000157823 (AP3S2) | hsa-miR-204-3p | 0.876877348724866 | | | | | | | | Gene details | | loading... | | | miRNA details | | loading... | |
pubMed links: miRNA | gene | both
UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 8mer | 4552-4567 | 0.0115135041642545 | 4 | | | | | | | | | | | Position on chromosome: | 15:90378383-90378398 | | Conserved species: | panTro2,rheMac2,rn4,mm9 | | Binding area: | | (Transcript) | 5' | GCAUUGAGCAGG___ACC___________A | 3' | | | ____________CCC___UG_CUUCCCAG_ | | | | ____________|||___||_||||||||_ | | | | ____________GGG___AC_GAAGGGUC_ | | | (miRNA) | 3' | ___________A___AA___G________G | 5' |
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| | | | | | | | | UTR3 | 6mer | 4155-4172 | 0.00262163313172115 | 2 | | | | | | | | | | | Position on chromosome: | 15:90377986-90378003 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | GAUUACAGGCA___ACCA__AUG______ | 3' | | | ___________CCC____CC___CCCAGC | | | | ___________|||____||___|||||| | | | | ___________GGG____GG___GGGUCG | | | (miRNA) | 3' | __________A___AAAC__AA_______ | 5' |
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| | | | | | | | | UTR3 | 6mer | 3939-3965 | 0.00243056534125552 | 3 | | | | | | | | | | | Position on chromosome: | 15:90377770-90377796 | | Conserved species: | panTro2,rheMac2,loxAfr3 | | Binding area: | | (Transcript) | 5' | U___CU____GCA___U___AG______U | 3' | | | _AUG__UCCC___UUG_CCU__UCCCAG_ | | | | _|.|__||||___|||_|||__||||||_ | | | | _UGC__AGGG___AAC_GGA__AGGGUC_ | | | (miRNA) | 3' | __________A_________________G | 5' |
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| | | | | | | | | UTR3 | 6mer | 3753-3773 | 0.0030036238936079 | 3 | | | | | | | | | | | Position on chromosome: | 15:90377584-90377604 | | Conserved species: | panTro2,rheMac2,oryCun2 | | Binding area: | | (Transcript) | 5' | AAAGCUG__AA__AUG__AAA_A______A | 3' | | | _______AC___C___UG___C_UCCCAG_ | | | | _______||___|___||___|_||||||_ | | | | _______UG___G___AC___G_AGGGUC_ | | | (miRNA) | 3' | _________CAG_GAA__G___A______G | 5' |
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| | | | | | | | | UTR3 | 6mer | 3274-3294 | 0.00119265829092081 | 2 | | | | | | | | | | | Position on chromosome: | 15:90377105-90377125 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | UGCAGGGC_G____GAGAGGGUG______ | 3' | | | ________A_GUCU_________CCCAGC | | | | ________|_|||._________|||||| | | | | ________U_CAGG_________GGGUCG | | | (miRNA) | 3' | _________G____GAAACGGAA______ | 5' |
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| | | | | | | | | UTR3 | 6mer | 2865-2892 | 0.00133033128680306 | 1 | | | | | | | | | | | Position on chromosome: | 15:90376696-90376723 | | Conserved species: | panTro2 | | Binding area: | | (Transcript) | 5' | A______AGA_GACGAAAGUAGA______ | 3' | | | _UUUUGC___U____________CCCAGC | | | | _.|||||___|____________|||||| | | | | _GAAACG___A____________GGGUCG | | | (miRNA) | 3' | G______G___A_________________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 2154-2180 | 0.00457313095092358 | 2 | | | | | | | | | | | Position on chromosome: | 15:90375985-90376011 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | GU___GUGG___AC_____GUAA_______ | 3' | | | __GCG____CUC___GCCU____UCCCAGC | | | | __.||____|.|___||||____||||||| | | | | __UGC____GGG___CGGA____AGGGUCG | | | (miRNA) | 3' | _____A______AAA_______________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 2020-2039 | 0.00260495331349459 | 2 | | | | | | | | | | | Position on chromosome: | 15:90375851-90375870 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | CCGUGGUAG__GACA___GUAG_________ | 3' | | | _________UG____CCU______UCCCAGC | | | | _________.|____|||______||||||| | | | | _________GC____GGA______AGGGUCG | | | (miRNA) | 3' | ________U__AG_____AACGGA_______ | 5' |
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| | | | | | | | | UTR3 | 6mer | 1053-1070 | 0.00199629429063534 | 3 | | | | | | | | | | | Position on chromosome: | 15:90374884-90374901 | | Conserved species: | panTro2,rheMac2,bosTau4 | | Binding area: | | (Transcript) | 5' | CACUUAGUAAA___C_____GGG__________ | 3' | | | ___________ACG_UCUCU_______CCCAGC | | | | ___________|||_||.||_______|||||| | | | | ___________UGC_AGGGA_______GGGUCG | | | (miRNA) | 3' | ____________________AACGGAA______ | 5' |
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| | | | | | | | | UTR3 | 6mer | 830-853 | 0.00246720211531365 | 2 | | | | | | | | | | | Position on chromosome: | 15:90374661-90374684 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | GAGA_C____GAAGUA__AGAG______A | 3' | | | ____G_CUCU______UG____UCCCAG_ | | | | ____|_|.||______||____||||||_ | | | | ____C_GGGA______AC____AGGGUC_ | | | (miRNA) | 3' | ___G_A____A_______GGA_______G | 5' |
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| | | | | | | | | UTR3 | 6mer | 208-229 | 0.00164726320965151 | 1 | | | | | | | | | | | Position on chromosome: | 15:90374039-90374060 | | Conserved species: | panTro2 | | Binding area: | | (Transcript) | 5' | CCCAUCA____GUACAG__G_AC______ | 3' | | | _______CCCU______UG_C__CCCAGC | | | | _______||||______||_|__|||||| | | | | _______GGGA______AC_G__GGGUCG | | | (miRNA) | 3' | ______A____A_______G_AA______ | 5' |
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| | | | | | | | | UTR3 | 7mer | 56-83 | 0.00587344675842873 | 4 | | | | | | | | | | | Position on chromosome: | 15:90373887-90373914 | | Conserved species: | panTro2,rheMac2,bosTau4,loxAfr3 | | Binding area: | | (Transcript) | 5' | U______GUGUUCAG____GCA_______ | 3' | | | _UGUCUC________UGCU___UCCCAGC | | | | _.|||.|________|||.___||||||| | | | | _GCAGGG________ACGG___AGGGUCG | | | (miRNA) | 3' | U______AA__________A_________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 509-533 | 0.0126343231827728 | 0 | | | | | | | | | | | Position on chromosome: | 15:90432369;90437113-90432372;90437133 | | Conserved species: | Not Conserved | | Binding area: | | (Transcript) | 5' | CUA____G___CUACCA__G________A | 3' | | | ___GUCC_CUU______GC_UUUCCCAG_ | | | | ___||||_|||______||_.|||||||_ | | | | ___CAGG_GAA______CG_GAAGGGUC_ | | | (miRNA) | 3' | __G________A________________G | 5' |
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| | | | | 13 | ENSG00000157823 (AP3S2) | hsa-miR-4735-3p | 0.871700866848276 | | | | | | | | Gene details | | loading... | | | miRNA details | | loading... | |
pubMed links: miRNA | gene | both
UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 8mer | 4615-4629 | 0.0208440294735067 | 2 | | | | | | | | | | | Position on chromosome: | 15:90378446-90378460 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | GUCAACAUGCCCAA___________________ | 3' | | | ______________GUC__AUUU__GCACCUUU | | | | ______________|||__||||__|||||||| | | | | ______________CAG__UAAA__CGUGGAAA | | | (miRNA) | 3' | _____________A___AU____CU________ | 5' |
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| | | | | | | | | UTR3 | 8mer | 4525-4541 | 0.0169905003435954 | 2 | | | | | | | | | | | Position on chromosome: | 15:90378356-90378372 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | GAACCUCCUCA____GGC__________C | 3' | | | ___________CUAG___UGAGCACCUU_ | | | | ___________|||.___||||||||||_ | | | | ___________GAUU___ACUCGUGGAA_ | | | (miRNA) | 3' | __________A____AA___________A | 5' |
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| | | | | | | | | UTR3 | 6mer | 1227-1232 | 0.00144746704326227 | 2 | | | | | | | | | | | Position on chromosome: | 15:90375058-90375063 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | CUGGGCCAUACCCCAAACAGCC______C | 3' | | | ______________________CACCUU_ | | | | ______________________||||||_ | | | | ______________________GUGGAA_ | | | (miRNA) | 3' | _____________________C______A | 5' |
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| | | | | | | | | UTR3 | 6mer | 788-801 | 0.00274012577530767 | 2 | | | | | | | | | | | Position on chromosome: | 15:90374619-90374632 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | UCCUGGCAGACAUC_______U________C | 3' | | | ______________CUGAUUU___CACCUU_ | | | | ______________||.||||___||||||_ | | | | ______________GAUUAAA___GUGGAA_ | | | (miRNA) | 3' | _____________A_______CUC______A | 5' |
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| | | | | 14 | ENSG00000157823 (AP3S2) | hsa-miR-3148 | 0.8690580772296 | | | | | | | | Gene details | | loading... | | | miRNA details | | loading... | |
pubMed links: miRNA | gene | both
UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 6mer | 3357-3381 | 0.00117783388320208 | 2 | | | | | | | | | | | Position on chromosome: | 15:90377188-90377212 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | AUGA____UGCUU____G__AAG_______ | 3' | | | ____GGGC_____CGCA_UA____UUUCCA | | | | ____..||_____|.||_.|____|||||| | | | | ____UUCG_____GUGU_GU____AAAGGU | | | (miRNA) | 3' | ________U________G__CAAA______ | 5' |
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| | | | | | | | | UTR3 | 7mer | 3242-3260 | 0.00536379645114945 | 3 | | | | | | | | | | | Position on chromosome: | 15:90377073-90377091 | | Conserved species: | panTro2,rheMac2,loxAfr3 | | Binding area: | | (Transcript) | 5' | ACCCGGUGUC__G_______UUG________ | 3' | | | __________AG_GC_CACC____UUUUCCA | | | | __________||_.|_||||____||||||| | | | | __________UC_UG_GUGG____AAAAGGU | | | (miRNA) | 3' | _________U__G__U____UCAA_______ | 5' |
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| | | | | | | | | UTR3 | 6mer | 2240-2260 | 0.00105398667855457 | 1 | | | | | | | | | | | Position on chromosome: | 15:90376071-90376091 | | Conserved species: | panTro2 | | Binding area: | | (Transcript) | 5' | GGUUGCCU___AAUU__G____C________ | 3' | | | ________GCA____CA_CUAG___UUUCCA | | | | ________|||____||_|.||___|||||| | | | | ________CGU____GU_GGUC___AAAGGU | | | (miRNA) | 3' | _______U___GU_________AAA______ | 5' |
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| | | | | | | | | UTR3 | 6mer | 938-965 | 0.00336869990243787 | 3 | | | | | | | | | | | Position on chromosome: | 15:90374769-90374796 | | Conserved species: | panTro2,rheMac2,bosTau4 | | Binding area: | | (Transcript) | 5' | C____UGGCUGUCUGUC___UG____________ | 3' | | | _AGCG____________CAU__C_____UUUCCA | | | | _|||.____________||.__|_____|||||| | | | | _UCGU____________GUG__G_____AAAGGU | | | (miRNA) | 3' | U___________________UG_UCAAA______ | 5' |
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| | | | | | | | | UTR3 | 8mer | 519-537 | 0.0231990939190986 | 1 | | | | | | | | | | | Position on chromosome: | 15:90374350-90374368 | | Conserved species: | panTro2 | | Binding area: | | (Transcript) | 5' | UCUUUCCAA______U__AAA_________U | 3' | | | _________AAG_AC_UA____UUUUUUCC_ | | | | _________|||_||_.|____||||||||_ | | | | _________UUC_UG_GU____AAAAAAGG_ | | | (miRNA) | 3' | ____________G__U__GGUC________U | 5' |
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| | | | | | | | | UTR3 | 6mer | 505-520 | 0.00273514492752027 | 2 | | | | | | | | | | | Position on chromosome: | 15:90374336-90374351 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | UUAAAAUUUUUU_C___U___A________U | 3' | | | ____________C_UAU_UCA___UUUUCC_ | | | | ____________|_.|._.||___||||||_ | | | | ____________G_GUG_GGU___AAAAGG_ | | | (miRNA) | 3' | ___________C_U___U___CAA______U | 5' |
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| | | | | | | | | UTR3 | 6mer | 373-389 | 0.00474069776440432 | 5 | | | | | | | | | | | Position on chromosome: | 15:90374204-90374220 | | Conserved species: | panTro2,rheMac2,bosTau4,canFam2,loxAfr3 | | Binding area: | | (Transcript) | 5' | CCCAUCCCUGGU____AGA______G_______ | 3' | | | ____________AGCA______AGU__UUUCCA | | | | ____________||||______|||__|||||| | | | | ____________UCGU______UCA__AAAGGU | | | (miRNA) | 3' | ___________U____GUGUGG___AA______ | 5' |
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| | | | | 15 | ENSG00000157823 (AP3S2) | hsa-miR-4711-5p | 0.86672884180346 | | | | | | | | Gene details | | loading... | | | miRNA details | | loading... | |
pubMed links: miRNA | gene | both
UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 8mer | 4689-4708 | 0.0356120747439215 | 2 | | | | | | | | | | | Position on chromosome: | 15:90378520-90378539 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | CAUGUGCAG_____C_G_______________ | 3' | | | _________UCAUG_C_UUCU___CUGAUGCA | | | | _________|||||_|_||||___|||||||| | | | | _________AGUAC_G_AAGA___GACUACGU | | | (miRNA) | 3' | ________G_____A______CCG________ | 5' |
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| | | | | | | | | UTR3 | 8mer | 3306-3321 | 0.00328096381757539 | 2 | | | | | | | | | | | Position on chromosome: | 15:90377137-90377152 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | UGGCUGGGGACC______C_______________U | 3' | | | ____________CUCA_G_CU_____CCUGAUGC_ | | | | ____________||||_|_||_____||||||||_ | | | | ____________GAGU_C_GA_____GGACUACG_ | | | (miRNA) | 3' | ________________A_A__AGACC________U | 5' |
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| | | | | | | | | UTR3 | 6mer | 927-955 | 0.00241417567687383 | 4 | | | | | | | | | | | Position on chromosome: | 15:90374758-90374786 | | Conserved species: | panTro2,rheMac2,dasNov2,loxAfr3 | | Binding area: | | (Transcript) | 5' | ________CAUUG__UU__AAAUAG______ | 3' | | | _UC_UGUC_____CU__CC______GAUGCA | | | | _||_||||_____||__||______|||||| | | | | _AG_ACAG_____GA__GG______CUACGU | | | (miRNA) | 3' | G__U____AA_____CC__A___________ | 5' |
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| | | | | 16 | ENSG00000157823 (AP3S2) | hsa-miR-5196-5p | 0.865444350125344 | | | | | | | | Gene details | | loading... | | | miRNA details | | loading... | |
pubMed links: miRNA | gene | both
UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 6mer | 4554-4571 | 0.00353229129726839 | 4 | | | | | | | | | | | Position on chromosome: | 15:90378385-90378402 | | Conserved species: | panTro2,rheMac2,rn4,mm9 | | Binding area: | | (Transcript) | 5' | CUGCAUUGAG___G__CA_____G______A | 3' | | | __________CAG_CC____CCU_CUUCCC_ | | | | __________||._||____||._||||||_ | | | | __________GUU_GG____GGG_GAAGGG_ | | | (miRNA) | 3' | _________G___G__AGCA__________A | 5' |
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| | | | | | | | | UTR3 | 6mer | 4226-4252 | 0.00156928692456896 | 1 | | | | | | | | | | | Position on chromosome: | 15:90378057-90378083 | | Conserved species: | panTro2 | | Binding area: | | (Transcript) | 5' | U___GG___AC__CAACC___G______G | 3' | | | _CUC__CUC__UG_____UCU_CUUCCC_ | | | | _|.|__|.|__.|_____||._||||||_ | | | | _GGG__GGG__GC_____AGG_GAAGGG_ | | | (miRNA) | 3' | ____UU___A___________G______A | 5' |
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| | | | | | | | | UTR3 | 6mer | 3957-3981 | 0.00217077586015691 | 1 | | | | | | | | | | | Position on chromosome: | 15:90377788-90377812 | | Conserved species: | panTro2 | | Binding area: | | (Transcript) | 5' | UUA_________AUGAAGAAUA_G______G | 3' | | | ___CCG__CCUC__________U_CUUCCC_ | | | | ___||.__||||__________._||||||_ | | | | ___GGU__GGAG__________G_GAAGGG_ | | | (miRNA) | 3' | __G___UG____CAG________G______A | 5' |
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| | | | | | | | | UTR3 | 6mer | 3507-3529 | 0.00082482987792748 | 2 | | | | | | | | | | | Position on chromosome: | 15:90377338-90377360 | | Conserved species: | rheMac2,dasNov2 | | Binding area: | | (Transcript) | 5' | GGUCUG_UU_UGGGC__G___U________ | 3' | | | ______C__G_____AC_CUC_GUUCCCU_ | | | | ______|__._____||_|||_||.||||_ | | | | ______G__U_____UG_GAG_CAGGGGA_ | | | (miRNA) | 3' | _______GG________G___________A | 5' |
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| | | | | | | | | UTR3 | 8mer | 2849-2870 | 0.0317010270606123 | 2 | | | | | | | | | | | Position on chromosome: | 15:90376680-90376701 | |
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