DIANA TOOLS - MicroT-CDS

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Threshold:

Results: 304 targets with miRNAs found in genes ENSG00000100154

. Threshold is set to 0.7.

Gene ID:	TTC28
Expression:	lymph node,prefrontal cortex,H1-hESC,breast,appendix,HUVEC cell line,HSMM cell line,liver,salivary gland,temporal lobe,gall bladder,K562,IMR-90,adrenal gland,brain,HepG2,BJ,small intestine,HeLa-S3,colon,esophagus,placenta,NHLF cell line,adrenal,A549,SK-N-SH_RA,adipose tissue,ovary,cerebellum,SK-N-SH,stomach,kidney,pancreas,frontal lobe,cerebral cortex,skin,skeletal muscle,heart,animal ovary,prostate,lung,thyroid,CD20-positive B cell cell line,testis,adipose,AG445,duodenum,bladder,spleen,endometr
External Gene ID:	ENSG00000100154
Description:
Chromosome:	22
DIANA resources:	microT v4 microT-CDS

Ensembl Gene Id

miRNA name

miTG score

Also Predicted

ENSG00000100154 (TTC28)

hsa-miR-153-3p

0.995368460547707

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

3816-3841

0.00585779163118931

Position on chromosome:

22:28377820-28377845

Conserved species:

panTro2,rheMac2,bosTau4,canFam2,dasNov2

Binding area:

(Transcript)	5'	ACA______GCUAAGAG__AUA_______	3'
		___UAUUUU________GU___UAUGCAG
		___.\|.\|\|\|________\|\|___\|\|\|\|\|\|.
		___GUGAAA________CA___AUACGUU
(miRNA)	3'	__A______A_________CUG_______	5'

UTR3

9mer

3470-3487

0.0750808396264334

Position on chromosome:

22:28377474-28377491

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	UCUUAUCCAGG______AGA__________	3'
		___________CAUUUU____ACUAUGCAA
		___________\|\|.\|\|\|____\|\|\|\|\|\|\|\|\|
		___________GUGAAA____UGAUACGUU
(miRNA)	3'	__________A______ACAC_________	5'

UTR3

6mer

3452-3472

0.00294414433452719

Position on chromosome:

22:28377456-28377476

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	GAACUAUG__A__________UAAA______	3'
		________CA___UUGUGAUU____AUGCAA
		________\|\|___\|\|\|\|\|\|.\|____\|\|\|\|\|\|
		________GU___AACACUGA____UACGUU
(miRNA)	3'	_______A__GAA__________________	5'

UTR3

6mer

2156-2162

0.00172299544617256

Position on chromosome:

22:28376160-28376166

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	AAACCUCAAGUUUCUAAAUCCA_______	3'
		______________________UAUGCAG
		______________________\|\|\|\|\|\|.
		______________________AUACGUU
(miRNA)	3'	_____________________G_______	5'

UTR3

6mer

1689-1706

0.00213454815161965

Position on chromosome:

22:28375693-28375710

Conserved species:

panTro2,rheMac2,canFam2

Binding area:

(Transcript)	5'	UUUCAGGCUA____GGAAAA_G______C	3'
		__________CACU______A_UAUGCA_
		__________\|\|\|\|______\|_\|\|\|\|\|\|_
		__________GUGA______U_AUACGU_
(miRNA)	3'	_________A____AAACAC_G______U	5'

UTR3

6mer

400-428

0.00517153049541981

Position on chromosome:

22:28374404-28374432

Conserved species:

panTro2,rheMac2,oryCun2

Binding area:

(Transcript)	5'	____G__CA_______GAAAAAUGCCA_____	3'
		_UCA_UU____GGCUG___________UGCAA
		_\|\|\|_\|\|____\|.\|\|.___________\|\|\|\|\|
		_AGU_AA____CUGAU___________ACGUU
(miRNA)	3'	U___G__AACA_____________________	5'

UTR3

6mer

186-204

0.0055645946423827

Position on chromosome:

22:28374190-28374208

Conserved species:

rheMac2,canFam2,loxAfr3,galGal3

Binding area:

(Transcript)	5'	CCACUGGCAU____GUUCCUUA________	3'
		__________UCAC_________UAUGCAG
		__________\|\|\|\|_________\|\|\|\|\|\|.
		__________AGUG_________AUACGUU
(miRNA)	3'	_________U____AAAACACUG_______	5'

ENSG00000100154 (TTC28)

hsa-miR-3658

0.990019961215172

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

9mer

3515-3535

0.0575607544986921

Position on chromosome:

22:28377519-28377539

Conserved species:

panTro2,rheMac2,rn4,mm9,canFam2,dasNov2

Binding area:

(Transcript)	5'	GCUGUCAA___AACU__AA___________	3'
		________CCA____UG___UUUUCUUAAA
		________\|\|\|____\|\|___\|\|\|\|\|\|\|\|\|\|
		________GGU____AC___AAAAGAAUUU
(miRNA)	3'	_______A_________CAC__________	5'

UTR3

7mer

2878-2903

0.00623476066476495

Position on chromosome:

22:28376882-28376907

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	CAA______AAGAGAGAGA___A________	3'
		___CCG_GG__________UGU__UCUUAAA
		___\|\|._\|\|__________\|\|\|__\|\|\|\|\|\|\|
		___GGU_CC__________ACA__AGAAUUU
(miRNA)	3'	__A___A_______________AA_______	5'

UTR3

6mer

2835-2852

0.000993511754856786

Position on chromosome:

22:28376839-28376856

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UUCUCCUACAG____GAC___AA_________	3'
		___________CUCU___GGU_____CUUAAA
		___________\|\|\|.___\|\|\|_____\|\|\|\|\|\|
		___________GAGG___CCA_____GAAUUU
(miRNA)	3'	__________A____UA____CAAAA______	5'

UTR3

7mer

2196-2207

0.00423629027058289

Position on chromosome:

22:28376200-28376211

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	GCAUUAGAUAGCAAAA_________________C	3'
		________________UCA_GG____UUCUUAA_
		________________.\|\|_\|\|____\|\|\|\|\|\|\|_
		________________GGU_CC____AAGAAUU_
(miRNA)	3'	_______________A___A__ACAA_______U	5'

UTR3

7mer

1866-1892

0.00594340657682482

Position on chromosome:

22:28375870-28375896

Conserved species:

panTro2

Binding area:

(Transcript)	5'	UG____AU_____UUUAUUCUG_______	3'
		__GUUU__GUGGU_________UCUUAAA
		__.\|.\|__.\|\|\|\|_________\|\|\|\|\|\|\|
		__UAGA__UACCA_________AGAAUUU
(miRNA)	3'	______GG_____CAAA____________	5'

UTR3

8mer

774-796

0.0108724491480027

Position on chromosome:

22:28374778-28374800

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	CAGAG__A__GA__CAAAGC________U	3'
		_____CA_GG__GU______UUUCUUAA_
		_____\|\|_\|\|__\|\|______\|\|\|\|\|\|\|\|_
		_____GU_CC__CA______AAAGAAUU_
(miRNA)	3'	____G__A__A_________________U	5'

ENSG00000100154 (TTC28)

hsa-miR-24-1-5p

0.988176236469095

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

371-395

0.083040008909177

Position on chromosome:

22:28374375-28374399

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,loxAfr3

Binding area:

(Transcript)	5'	UAAU_____UUGCUU_____A_________	3'
		____CUGGU______UCAGU__AGUAGGCA
		____\|\|\|.\|______\|\|\|\|.__\|\|\|\|\|\|\|\|
		____GACUA______AGUCG__UCAUCCGU
(miRNA)	3'	___U_____U__________AG________	5'

ENSG00000100154 (TTC28)

hsa-miR-153-5p

0.987435236577363

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

9mer

3878-3898

0.0260419215512936

Position on chromosome:

22:28377882-28377902

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UUCUUCAC___G__UUUG___________	3'
		________CAG_AU____UACAAAAAUGA
		________\|\|._\|\|____.\|\|\|\|\|\|\|\|\|\|
		________GUU_UA____GUGUUUUUACU
(miRNA)	3'	_______C___G_________________	5'

UTR3

7mer

3686-3705

0.00902789984326894

Position on chromosome:

22:28377690-28377709

Conserved species:

panTro2

Binding area:

(Transcript)	5'	UGUUAUAUU________AAA__G________	3'
		_________AGC__CAA___CA_AAAAAUGG
		_________\|\|\|__\|\|\|___\|\|_\|\|\|\|\|\|\|.
		_________UCG__GUU___GU_UUUUUACU
(miRNA)	3'	____________AC___GUA__G________	5'

UTR3

6mer

3675-3695

0.00370880623281393

Position on chromosome:

22:28377679-28377699

Conserved species:

panTro2,rheMac2,rn4,mm9,bosTau4,canFam2

Binding area:

(Transcript)	5'	CAAAAAC__AAAA_UG___UUU______C	3'
		_______AG____A__GUU___AAAAUG_
		_______\|\|____\|__.\|.___\|\|\|\|\|\|_
		_______UC____U__UAG___UUUUAC_
(miRNA)	3'	_________GACG_UG___UGU______U	5'

UTR3

6mer

3455-3481

0.0051119951219308

Position on chromosome:

22:28377459-28377485

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	U__AACUA______UGUGAUUU______C	3'
		_AG_____UGCAAU________AAAAUG_
		_\|\|_____\|\|\|\|\|.________\|\|\|\|\|\|_
		_UC_____ACGUUG________UUUUAC_
(miRNA)	3'	___G__________UAGUGU________U	5'

UTR3

6mer

3330-3352

0.00300232624933097

Position on chromosome:

22:28377334-28377356

Conserved species:

panTro2,rheMac2,oryCun2,dasNov2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	UUAAA________AAA___UUUU______U	3'
		_____AGCU_CAA___GUU____AAAAUG_
		_____\|\|\|\|_\|\|\|___.\|.____\|\|\|\|\|\|_
		_____UCGA_GUU___UAG____UUUUAC_
(miRNA)	3'	_________C___G_____UGU_______U	5'

UTR3

6mer

3270-3294

0.00157696041640355

Position on chromosome:

22:28377274-28377298

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	AUCA__U___G__G_AAAGGUU_______	3'
		____AG_UUG_AA_G_______GAAAUGA
		____\|\|_.\|\|_\|\|_._______.\|\|\|\|\|\|
		____UC_GAC_UU_U_______UUUUACU
(miRNA)	3'	__________G__G_AGUGU_________	5'

UTR3

7mer

2272-2291

0.00403304775168961

Position on chromosome:

22:28376276-28376295

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UUUCUUUAU___A____G_GA__________	3'
		_________GUU_GUAG_G____AAAAAUGG
		_________\|.\|_\|.\|._.____\|\|\|\|\|\|\|.
		_________CGA_CGUU_U____UUUUUACU
(miRNA)	3'	________U________G_AGUG________	5'

UTR3

7mer

1826-1842

0.00457404725928742

Position on chromosome:

22:28375830-28375846

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	AGGAAGGGAAAA___AAGUGAU_______	3'
		____________CAA_______AAAAUGA
		____________\|\|\|_______\|\|\|\|\|\|\|
		____________GUU_______UUUUACU
(miRNA)	3'	___________C___GUAGUGU_______	5'

UTR3

6mer

1745-1761

0.000722587718304951

Position on chromosome:

22:28375749-28375765

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	GUCUUGGUGUUC_____UG_GU__________	3'
		____________UUGUA__A_____AAAAUGG
		____________.\|\|.\|__\|_____\|\|\|\|\|\|.
		____________GACGU__U_____UUUUACU
(miRNA)	3'	___________C_____UG_AGUGU_______	5'

UTR3

6mer

1129-1151

0.00280223539483231

Position on chromosome:

22:28375133-28375155

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UGACUC___GU__GG__G___G_______	3'
		______CUG__AU__AU_ACA_AAAAUGG
		______\|\|\|__\|.__\|\|_\|\|\|_\|\|\|\|\|\|.
		______GAC__UG__UA_UGU_UUUUACU
(miRNA)	3'	_____C___GU______G___________	5'

UTR3

6mer

757-784

0.0026079067680261

Position on chromosome:

22:28374761-28374788

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	A____UUCU____UCUC______U______	3'
		_AGCU____UAAU____UC_CAG_AAAUGA
		_\|\|\|\|____.\|\|.____\|\|_\|\|._\|\|\|\|\|\|
		_UCGA____GUUG____AG_GUU_UUUACU
(miRNA)	3'	_____C_______U_____U__________	5'

UTR3

7mer

658-678

0.00839644940948131

Position on chromosome:

22:28374662-28374682

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	GAUCCACA___AUGU___A___________	3'
		________CUG____GCA_CAC_AAAAUGA
		________\|\|\|____.\|\|_\|\|\|_\|\|\|\|\|\|\|
		________GAC____UGU_GUG_UUUUACU
(miRNA)	3'	_______C___GU_____A___U_______	5'

UTR3

7mer

408-426

0.0053451568403811

Position on chromosome:

22:28374412-28374430

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	GAUAAUUUC________G___U_G_______C	3'
		_________AGUU_CAG___C_G_AAAAAUG_
		_________\|\|.\|_\|\|.___\|_._\|\|\|\|\|\|\|_
		_________UCGA_GUU___G_U_UUUUUAC_
(miRNA)	3'	_____________C___GUA___G_______U	5'

UTR3

7mer

316-334

0.00740186551942369

Position on chromosome:

22:28374320-28374338

Conserved species:

panTro2,canFam2,loxAfr3

Binding area:

(Transcript)	5'	CACCUAUUCU_____UC____U_________	3'
		__________GCUGU__UAUC___AAAAUGA
		__________\|\|\|\|.__.\|\|\|___\|\|\|\|\|\|\|
		__________CGACG__GUAG___UUUUACU
(miRNA)	3'	_________U_____UU____UGU_______	5'

UTR3

7mer

6878-6894

0.0122464933833442

Position on chromosome:

22:28693802-28693818

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	GCCCACUUAUCA_____U____________	3'
		____________GCAGC_UCA_GAAAAUGA
		____________\|\|\|.\|_\|\|\|_.\|\|\|\|\|\|\|
		____________CGUUG_AGU_UUUUUACU
(miRNA)	3'	___________A_____U___G________	5'

UTR3

7mer

1109-1132

0.00896115289533661

Position on chromosome:

22:28379318-28379341

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	CAGCA__C___AU__U_CAGU________	3'
		_____CU_CAA__UC_C____GAAAAUGA
		_____\|\|_\|\|\|__\|\|_\|____.\|\|\|\|\|\|\|
		_____GA_GUU__AG_G____UUUUUACU
(miRNA)	3'	____C__C___GU__U_____________	5'

ENSG00000100154 (TTC28)

hsa-miR-24-2-5p

0.987383987244309

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

371-395

0.0819669052644106

Position on chromosome:

22:28374375-28374399

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,loxAfr3

Binding area:

(Transcript)	5'	UAAU___GUU__C_______A_________	3'
		____CUG___UG_UUUCAGU__AGUAGGCA
		____\|\|\|___\|\|_\|\|\|\|\|\|.__\|\|\|\|\|\|\|\|
		____GAC___AC_AAAGUCG__UCAUCCGU
(miRNA)	3'	____________________AG________	5'

ENSG00000100154 (TTC28)

hsa-miR-3116

0.981063041117182

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

3486-3508

0.0703710267859364

Position on chromosome:

22:28377490-28377512

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3

Binding area:

(Transcript)	5'	AAAAAA_______AACUCUUA________	3'
		______AUUAUGU________UCCAGGCA
		______\|.\|\|\|\|\|________\|\|\|\|\|\|\|\|
		______UGAUACA________AGGUCCGU
(miRNA)	3'	_____A_______________________	5'

UTR3

8mer

3171-3185

0.00368166941873634

Position on chromosome:

22:28377175-28377189

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	GAUUUAACCAGAA____GC_____________U	3'
		_____________UCCC__C____UUCCAGGC_
		_____________\|\|\|\|__\|____\|\|\|\|\|\|\|\|_
		_____________AGGG__G____AAGGUCCG_
(miRNA)	3'	____________C____AU_AUAC________U	5'

UTR3

6mer

3039-3060

0.0006519674660011

Position on chromosome:

22:28377043-28377064

Conserved species:

panTro2

Binding area:

(Transcript)	5'	CACCUG_________AGCUGCCC______C	3'
		______CCU_CUGUG________CCAGGC_
		______\|\|\|_\|\|.\|\|________\|\|\|\|\|\|_
		______GGA_GAUAC________GGUCCG_
(miRNA)	3'	_____G___U_____AA____________U	5'

UTR3

6mer

1336-1363

0.000960153068766876

Position on chromosome:

22:28375340-28375367

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	C__C____AAGUA____GGACUA______	3'
		_AG_CUCU_____GCUG______CAGGCA
		_\|\|_\|.\|\|_____.\|\|.______\|\|\|\|\|\|
		_UC_GGGA_____UGAU______GUCCGU
(miRNA)	3'	___A_____________ACAAG_______	5'

UTR3

6mer

1269-1290

0.000535716728808745

Position on chromosome:

22:28375273-28375294

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	AGAUGG_________C____UGG______U	3'
		______GGUUUC_AC_AUGU___CCAGGC_
		______.\|\|..\|_\|\|_\|\|\|\|___\|\|\|\|\|\|_
		______UCAGGG_UG_UACA___GGUCCG_
(miRNA)	3'	____________A__A____A________U	5'

UTR3

7mer

5608-5630

0.00255566852954433

Position on chromosome:

22:28503995-28504017

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	ACUGC____GGGGAG_G____________U	3'
		_____UCUC______A_UAUG_UCCAGGC_
		_____\|\|.\|______\|_\|\|\|\|_\|\|\|\|\|\|\|_
		_____AGGG______U_AUAC_AGGUCCG_
(miRNA)	3'	____C____A______G____A_______U	5'

UTR3

8mer

3613-3630

0.0102445310664768

Position on chromosome:

22:28490167-28490184

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	CAGUGGAAAA___A_G__AC________C	3'
		__________CUC_A_UG__UUCCAGGC_
		__________\|.\|_\|_\|.__\|\|\|\|\|\|\|\|_
		__________GGG_U_AU__AAGGUCCG_
(miRNA)	3'	_________A___A_G__AC________U	5'

UTR3

7mer

1840-1863

0.00207850442954003

Position on chromosome:

22:28385967-28385990

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	UCCA__AGG_____GUUCA_C_______U	3'
		____CC___UGCUG_____G_UCCAGGC_
		____\|\|___\|.\|\|._____\|_\|\|\|\|\|\|\|_
		____GG___AUGAU_____C_AGGUCCG_
(miRNA)	3'	___A__G_______A_____A_______U	5'

ENSG00000100154 (TTC28)

hsa-miR-548ap-3p

0.977456630027144

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

3681-3688

0.02130516817397

Position on chromosome:

22:28377685-28377692

Conserved species:

panTro2,rheMac2,rn4,canFam2

Binding area:

(Transcript)	5'	UAUUAGCCAAAAACAGAAAAA________	3'
		_____________________UGGUUUUU
		_____________________\|\|\|\|\|\|\|\|
		_____________________ACCAAAAA
(miRNA)	3'	____________________C________	5'

UTR3

7mer

3394-3400

0.0221482090470165

Position on chromosome:

22:28377398-28377404

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3

Binding area:

(Transcript)	5'	UUUGUAUAUGGAUAAACAACU_______A	3'
		_____________________UGGUUUU_
		_____________________\|\|\|\|\|\|\|_
		_____________________ACCAAAA_
(miRNA)	3'	____________________C_______A	5'

UTR3

6mer

3337-3355

0.00301920166599338

Position on chromosome:

22:28377341-28377359

Conserved species:

panTro2,rheMac2,bosTau4,dasNov2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	UAUUAUUUUU_____CUCAAAAA______	3'
		__________AAAAG________GUUUUU
		__________\|\|\|\|\|________\|\|\|\|\|\|
		__________UUUUC________CAAAAA
(miRNA)	3'	_______________AUUAACAC______	5'

UTR3

6mer

2546-2558

0.00153541105252314

Position on chromosome:

22:28376550-28376562

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	GACCUCAGGAUCCCC______G_________A	3'
		_______________AGGUGG____GGUUUU_
		_______________\|.\|\|..____\|\|\|\|\|\|_
		_______________UUCAUU____CCAAAA_
(miRNA)	3'	______________U______AACA______A	5'

UTR3

7mer

2413-2419

0.00213687263034665

Position on chromosome:

22:28376417-28376423

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UUCUCCUGAGCUCCAUCCUAGG_______	3'
		______________________GGUUUUU
		______________________\|\|\|\|\|\|\|
		______________________CCAAAAA
(miRNA)	3'	_____________________A_______	5'

UTR3

7mer

1940-1946

0.00558212318774324

Position on chromosome:

22:28375944-28375950

Conserved species:

panTro2,rheMac2,bosTau4,canFam2,loxAfr3

Binding area:

(Transcript)	5'	AGUUACUCAUGGACUCUAACC_______A	3'
		_____________________UGGUUUU_
		_____________________\|\|\|\|\|\|\|_
		_____________________ACCAAAA_
(miRNA)	3'	____________________C_______A	5'

UTR3

8mer

1879-1903

0.00373939250328889

Position on chromosome:

22:28375883-28375907

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	CUG_____CCAA____UUA_________A	3'
		___AAGAG____UGGU___UGUGGUUUU_
		___\|\|.\|\|____\|..\|___\|\|\|\|\|\|\|\|\|_
		___UUUUC____AUUA___ACACCAAAA_
(miRNA)	3'	____________________________A	5'

UTR3

8mer

1585-1592

0.00436573004610323

Position on chromosome:

22:28375589-28375596

Conserved species:

panTro2,rheMac2,canFam2

Binding area:

(Transcript)	5'	GGCUAAGACUGGUCAGCGGUC________	3'
		_____________________UGGUUUUU
		_____________________\|\|\|\|\|\|\|\|
		_____________________ACCAAAAA
(miRNA)	3'	____________________C________	5'

UTR3

6mer

595-606

0.00356350105511413

Position on chromosome:

22:28374599-28374610

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	CGGUCCACACUGAAAC___CUG______A	3'
		________________UUG___GGUUUU_
		________________\|\|\|___\|\|\|\|\|\|_
		________________AAC___CCAAAA_
(miRNA)	3'	_______________U___A________A	5'

UTR3

8mer+mismatch

301-317

0.00491889848244271

Position on chromosome:

22:28374305-28374321

Conserved species:

panTro2,oryCun2,canFam2,loxAfr3

Binding area:

(Transcript)	5'	UAUCUAAAAU_____UACC________GU	3'
		__________GAGUG____UGUGGUUU__
		__________.\|\|\|.____\|\|\|\|\|\|\|\|__
		__________UUCAU____ACACCAAA__
(miRNA)	3'	_________U_____UA__________A_	5'

ENSG00000100154 (TTC28)

hsa-miR-513c-3p

0.977290221807633

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

3736-3759

0.0163303134985361

Position on chromosome:

22:28377740-28377763

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	CUGG__G____U__GAUAUA________C	3'
		____UU_GGGG_GG______UGAAAUUU_
		____.\|_.\|.._\|\|______\|\|\|\|\|\|\|\|_
		____GA_UCUU_CC______ACUUUAAA_
(miRNA)	3'	___A__G____U________________U	5'

UTR3

6mer

3322-3341

0.00466737080582741

Position on chromosome:

22:28377326-28377345

Conserved species:

panTro2,rheMac2,mm9,oryCun2,bosTau4,canFam2,echTel1

Binding area:

(Transcript)	5'	UCAAAAAG___________U__C______U	3'
		________UUUUUUA_AAA_GU_AAAUUU_
		________.\|\|.\|.\|_\|\|\|_\|\|_\|\|\|\|\|\|_
		________GAAGAGU_UUU_CA_UUUAAA_
(miRNA)	3'	_______A_______C___C__C______U	5'

UTR3

6mer

3212-3217

0.00219575509107937

Position on chromosome:

22:28377216-28377221

Conserved species:

rheMac2

Binding area:

(Transcript)	5'	AAAAAAAAAAAAAAAAAAAAAA______C	3'
		______________________AAAUUU_
		______________________\|\|\|\|\|\|_
		______________________UUUAAA_
(miRNA)	3'	_____________________C______U	5'

UTR3

6mer

2776-2801

0.00231168180091525

Position on chromosome:

22:28376780-28376805

Conserved species:

panTro2,rheMac2,oryCun2,dasNov2,loxAfr3

Binding area:

(Transcript)	5'	UCA___AG__________AACCAUU______	3'
		___UCU__UUAGG__GGU_______AAUUUA
		___\|\|\|__\|.\|\|.__\|\|\|_______\|\|\|\|\|\|
		___AGA__AGUCU__CCA_______UUAAAU
(miRNA)	3'	______AG_____UU___CU___________	5'

UTR3

6mer

2716-2737

0.000720812505709562

Position on chromosome:

22:28376720-28376741

Conserved species:

panTro2,rheMac2,canFam2,loxAfr3

Binding area:

(Transcript)	5'	AUUAGUA__GAG_____UU___A________	3'
		_______CU___UUUAG___GG__GAAUUUA
		_______\|\|___.\|.\|\|___\|\|__.\|\|\|\|\|\|
		_______GA___GAGUC___CC__UUUAAAU
(miRNA)	3'	______A__A_______UUU__AC_______	5'

UTR3

6mer

2407-2431

0.00168093563994229

Position on chromosome:

22:28376411-28376435

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UGAG__CCA__CU______UUUU______	3'
		____CU___UC__AGGGGU____AAUUUA
		____\|\|___\|\|__\|..\|\|\|____\|\|\|\|\|\|
		____GA___AG__UUUCCA____UUAAAU
(miRNA)	3'	___A__AG___UC______CU________	5'

UTR3

7mer

2233-2260

0.00303732239900853

Position on chromosome:

22:28376237-28376264

Conserved species:

rheMac2

Binding area:

(Transcript)	5'	A_____UGU__CAA___AAGACC_______	3'
		_C_CAG___AG___GUG______AAAUUUA
		_\|_\|\|\|___\|\|___\|\|\|______\|\|\|\|\|\|\|
		_G_GUC___UC___CAC______UUUAAAU
(miRNA)	3'	A_A___UU______________________	5'

UTR3

9mer

103-123

0.0412473304702582

Position on chromosome:

22:28374107-28374127

Conserved species:

rheMac2,bosTau4,galGal3

Binding area:

(Transcript)	5'	ACAUUAAA_______UAUUA__________	3'
		________CUUUUUA______UGAAAUUUA
		________\|\|\|.\|.\|______\|\|\|\|\|\|\|\|\|
		________GAAGAGU______ACUUUAAAU
(miRNA)	3'	_______A_______CUUUCC_________	5'

ENSG00000100154 (TTC28)

hsa-miR-513a-3p

0.977047719659858

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

3736-3763

0.0165153332177104

Position on chromosome:

22:28377740-28377767

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	__GG__G____U__GAUAUA________C	3'
		CU__UU_GGGG_GG______UGAAAUUU_
		\|.__.\|_.\|.._\|\|______\|\|\|\|\|\|\|\|_
		GG__GA_UCUU_CC______ACUUUAAA_
(miRNA)	3'	__AA__G____U________________U	5'

UTR3

6mer

3322-3341

0.00465953383093859

Position on chromosome:

22:28377326-28377345

Conserved species:

panTro2,rheMac2,mm9,oryCun2,bosTau4,canFam2,echTel1

Binding area:

(Transcript)	5'	UCAAAAAG___________U__C______U	3'
		________UUUUUUA_AAA_GU_AAAUUU_
		________.\|\|.\|.\|_\|\|\|_\|\|_\|\|\|\|\|\|_
		________GAAGAGU_UUU_CA_UUUAAA_
(miRNA)	3'	_______G_______C___C__C______U	5'

UTR3

6mer

3212-3217

0.00219575509107937

Position on chromosome:

22:28377216-28377221

Conserved species:

rheMac2

Binding area:

(Transcript)	5'	AAAAAAAAAAAAAAAAAAAAAA______C	3'
		______________________AAAUUU_
		______________________\|\|\|\|\|\|_
		______________________UUUAAA_
(miRNA)	3'	_____________________C______U	5'

UTR3

6mer

2776-2801

0.00231168180091525

Position on chromosome:

22:28376780-28376805

Conserved species:

panTro2,rheMac2,oryCun2,dasNov2,loxAfr3

Binding area:

(Transcript)	5'	UCA___AG__________AACCAUU______	3'
		___UCU__UUAGG__GGU_______AAUUUA
		___.\|\|__\|.\|\|.__\|\|\|_______\|\|\|\|\|\|
		___GGA__AGUCU__CCA_______UUAAAU
(miRNA)	3'	______AG_____UU___CU___________	5'

UTR3

6mer

2716-2737

0.000725595441723473

Position on chromosome:

22:28376720-28376741

Conserved species:

panTro2,rheMac2,canFam2,loxAfr3

Binding area:

(Transcript)	5'	AUUAGUA__GAG_____UU___A________	3'
		_______CU___UUUAG___GG__GAAUUUA
		_______\|\|___.\|.\|\|___\|\|__.\|\|\|\|\|\|
		_______GA___GAGUC___CC__UUUAAAU
(miRNA)	3'	______G__A_______UUU__AC_______	5'

UTR3

6mer

2407-2429

0.00163539435489286

Position on chromosome:

22:28376411-28376433

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UGAGCU__A__C_________UUUU______	3'
		______CC_UC_UAGG__GGU____AAUUUA
		______\|\|_\|\|_.\|\|.__\|\|\|____\|\|\|\|\|\|
		______GG_AG_GUCU__CCA____UUAAAU
(miRNA)	3'	________A__A____UU___CU________	5'

UTR3

7mer

2233-2260

0.00304998356887926

Position on chromosome:

22:28376237-28376264

Conserved species:

rheMac2

Binding area:

(Transcript)	5'	A__AGUG___C______AAGACC_______	3'
		_CC____UAG_AA_GUG______AAAUUUA
		_\|\|____.\|\|_\|\|_\|\|\|______\|\|\|\|\|\|\|
		_GG____GUC_UU_CAC______UUUAAAU
(miRNA)	3'	___AAGA___U__C________________	5'

UTR3

9mer

103-123

0.0409205882652523

Position on chromosome:

22:28374107-28374127

Conserved species:

rheMac2,bosTau4,galGal3

Binding area:

(Transcript)	5'	ACAUUAAA_______UAUUA__________	3'
		________CUUUUUA______UGAAAUUUA
		________\|\|\|.\|.\|______\|\|\|\|\|\|\|\|\|
		________GAAGAGU______ACUUUAAAU
(miRNA)	3'	_______G_______CUUUCC_________	5'

ENSG00000100154 (TTC28)

hsa-miR-6750-5p

0.975449221011911

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

7mer

4133-4156

0.0038525124792037

Position on chromosome:

22:28378137-28378160

Conserved species:

panTro2

Binding area:

(Transcript)	5'	GGCCU____UUU___________CC_______	3'
		_____GGCG___GCU___UCAGC__UUCCCUG
		_____.\|\|.___\|\|\|___.\|\|\|\|__\|\|\|\|\|\|\|
		_____UCGU___CGA___GGUCG__AAGGGAC
(miRNA)	3'	_______________GUG_____AC_______	5'

UTR3

6mer

3926-3945

0.00394641992891789

Position on chromosome:

22:28377930-28377949

Conserved species:

panTro2,rheMac2,canFam2

Binding area:

(Transcript)	5'	CAAAUGUUU_____________AAC______	3'
		_________GUUUACCU__UUG___UCCCUG
		_________\|.\|.\|\|\|.__.\|\|___\|\|\|\|\|\|
		_________CGAGUGGG__GAC___AGGGAC
(miRNA)	3'	________U________UC___A________	5'

UTR3

8mer

3160-3182

0.0184881461413134

Position on chromosome:

22:28377164-28377186

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	AAUCC__C_________GCUC_________U	3'
		_____CG_CU__UCCAG____CUGUUCCCU_
		_____\|._\|\|__.\|\|\|\|____\|\|\|\|\|\|\|\|\|_
		_____GU_GA__GGGUC____GACAAGGGA_
(miRNA)	3'	____C__C__GU__________________C	5'

UTR3

6mer

3133-3155

0.000983239382714152

Position on chromosome:

22:28377137-28377159

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	UUUUA_______CUGAAUUUUA______U	3'
		_____UUAGCUG__________UUCCCU_
		_____..\|\|\|\|\|__________\|\|\|\|\|\|_
		_____GGUCGAC__________AAGGGA_
(miRNA)	3'	____G_______________________C	5'

UTR3

6mer

2088-2115

0.00106959024181664

Position on chromosome:

22:28376092-28376119

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	C_UU___U___A___GCCAAG_A______	3'
		_C__CUU_CCC_AGU______G_UCCCUG
		_\|__\|\|._\|\|\|_\|\|.______\|_\|\|\|\|\|\|
		_G__GAG_GGG_UCG______C_AGGGAC
(miRNA)	3'	C_UC___U_______A______A______	5'

UTR3

6mer

1368-1387

0.00136425560031754

Position on chromosome:

22:28375372-28375391

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UUCCUCCUG____________AAUUC______	3'
		_________GGUUCA___AGC_____UCCCUG
		_________.\|.\|\|\|___\|\|\|_____\|\|\|\|\|\|
		_________UCGAGU___UCG_____AGGGAC
(miRNA)	3'	________G______GGG___ACA________	5'

UTR3

9mer

254-277

0.0240751892745065

Position on chromosome:

22:28374258-28374281

Conserved species:

panTro2

Binding area:

(Transcript)	5'	UGUGC___A__C____AAGA_________	3'
		_____CAG_UC_UUCA____UGUUCCCUG
		_____\|\|\|_\|\|_..\|\|____\|\|\|\|\|\|\|\|\|
		_____GUC_AG_GGGU____ACAAGGGAC
(miRNA)	3'	____C___G__U____CG___________	5'

UTR3

7mer

7-33

0.0171073735714601

Position on chromosome:

22:28374011-28374037

Conserved species:

panTro2,bosTau4,loxAfr3

Binding area:

(Transcript)	5'	U_____GU__AUUAA___AUGA_______C	3'
		_CAG_U__CU_____AGC____GUUCCCU_
		_\|\|\|_\|__\|._____\|\|\|____\|\|\|\|\|\|\|_
		_GUC_A__GG_____UCG____CAAGGGA_
(miRNA)	3'	C___G_GU__G_______A__________C	5'

ENSG00000100154 (TTC28)

hsa-miR-95-5p

0.974718009537888

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

7mer

3427-3442

0.00648534281156345

Position on chromosome:

22:28377431-28377446

Conserved species:

panTro2,canFam2,dasNov2

Binding area:

(Transcript)	5'	GCAACUUUGUGCU_____A_____________	3'
		_____________UUUAA___ACA_UUAUUGA
		_____________\|\|.\|\|___\|\|\|_\|\|\|\|\|\|\|
		_____________AAGUU___UGU_AAUAACU
(miRNA)	3'	____________U_____GUC___A_______	5'

UTR3

7mer

1978-1993

0.00266470370738932

Position on chromosome:

22:28375982-28375997

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	ACCACCCUGCCGC___CU___UG_________	3'
		_____________UUC____G__G_UUAUUGA
		_____________\|\|\|____\|__._\|\|\|\|\|\|\|
		_____________AAG____C__U_AAUAACU
(miRNA)	3'	____________U___UUGU_UG_A_______	5'

UTR3

8mer

72-88

0.0612447498512086

Position on chromosome:

22:28374076-28374092

Conserved species:

panTro2,rheMac2,rn4,mm9,bosTau4,canFam2,loxAfr3,galGal3,xenTro2,danRer6

Binding area:

(Transcript)	5'	AUGUAAAAAGAA_UU__U__U________	3'
		____________C__CA_AU_UUUAUUGA
		____________\|__\|\|_\|._\|\|\|\|\|\|\|\|
		____________G__GU_UG_AAAUAACU
(miRNA)	3'	___________A_UU__C__U________	5'

ENSG00000100154 (TTC28)

hsa-miR-548aa

0.972098395259248

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

3681-3696

0.0226276388396453

Position on chromosome:

22:28377685-28377700

Conserved species:

panTro2,rheMac2,rn4,canFam2

Binding area:

(Transcript)	5'	UAUUAGCCAAAAA_____AAA____________	3'
		_____________CAGAA_______UGGUUUUU
		_____________\|\|.\|\|_______\|\|\|\|\|\|\|\|
		_____________GUUUU_______ACCAAAAA
(miRNA)	3'	____________C_____CAUUAAC________	5'

UTR3

7mer

3394-3413

0.0230175782689701

Position on chromosome:

22:28377398-28377417

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3

Binding area:

(Transcript)	5'	UUUGUAUA___A_____CAACU__________A	3'
		________UGG__UAAA________UGGUUUU_
		________\|\|\|__.\|\|\|________\|\|\|\|\|\|\|_
		________ACC__GUUU________ACCAAAA_
(miRNA)	3'	___________AC____UCAUUAAC_______A	5'

UTR3

6mer

3337-3356

0.00300142546737853

Position on chromosome:

22:28377341-28377360

Conserved species:

panTro2,rheMac2,bosTau4,dasNov2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	UAUUAUUUU______CUCAAAAA______	3'
		_________UAAAAG________GUUUUU
		_________.\|\|\|\|\|________\|\|\|\|\|\|
		_________GUUUUC________CAAAAA
(miRNA)	3'	________C______AUUAACAC______	5'

UTR3

6mer

2546-2566

0.00144156905257507

Position on chromosome:

22:28376550-28376570

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	GACCUCA__AUC_CC______G_________A	3'
		_______GG___C__AGGUGG____GGUUUU_
		_______\|\|___\|__\|.\|\|..____\|\|\|\|\|\|_
		_______CC___G__UUCAUU____CCAAAA_
(miRNA)	3'	______A__AC__UU______AACA______A	5'

UTR3

7mer

2413-2432

0.00214921710143018

Position on chromosome:

22:28376417-28376436

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UUCUCCUGA__UCCAUCCUAGG________	3'
		_________GC____________GGUUUUU
		_________\|\|____________\|\|\|\|\|\|\|
		_________CG____________CCAAAAA
(miRNA)	3'	________A__UUUUCAUUAACA_______	5'

UTR3

7mer

1940-1958

0.00555573747216962

Position on chromosome:

22:28375944-28375962

Conserved species:

panTro2,rheMac2,bosTau4,canFam2,loxAfr3

Binding area:

(Transcript)	5'	AGUUACUCA___ACUCUAACC____________A	3'
		_________UGG______________UGGUUUU_
		_________\|\|\|______________\|\|\|\|\|\|\|_
		_________ACC______________ACCAAAA_
(miRNA)	3'	____________ACGUUUUCAUUAAC_______A	5'

UTR3

8mer

1879-1897

0.00391637878790994

Position on chromosome:

22:28375883-28375901

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	CUGAAGAGC___U___UUA_________A	3'
		_________CAA_GGU___UGUGGUUUU_
		_________\|\|\|_.\|\|___\|\|\|\|\|\|\|\|\|_
		_________GUU_UCA___ACACCAAAA_
(miRNA)	3'	________C___U___UUA_________A	5'

UTR3

8mer

1585-1604

0.00376311445113229

Position on chromosome:

22:28375589-28375608

Conserved species:

panTro2,rheMac2,canFam2

Binding area:

(Transcript)	5'	GGCUAAGAC________C___C____________	3'
		_________UGGU_CAG_GGU_____UGGUUUUU
		_________\|\|\|\|_\|\|._.\|\|_____\|\|\|\|\|\|\|\|
		_________ACCA_GUU_UCA_____ACCAAAAA
(miRNA)	3'	_____________C___U___UUAAC________	5'

UTR3

6mer

595-621

0.00326677132295231

Position on chromosome:

22:28374599-28374625

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	C___C__CACUG__AC___CUG______A	3'
		_GGU_CA_____AA__UUG___GGUUUU_
		_\|\|\|_\|\|_____\|\|__\|\|\|___\|\|\|\|\|\|_
		_CCA_GU_____UU__AAC___CCAAAA_
(miRNA)	3'	A___C__UUUCA_______A________A	5'

ENSG00000100154 (TTC28)

hsa-miR-548t-3p

0.972098395259248

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

3681-3696

0.0226276388396453

Position on chromosome:

22:28377685-28377700

Conserved species:

panTro2,rheMac2,rn4,canFam2

Binding area:

(Transcript)	5'	UAUUAGCCAAAAA_____AAA____________	3'
		_____________CAGAA_______UGGUUUUU
		_____________\|\|.\|\|_______\|\|\|\|\|\|\|\|
		_____________GUUUU_______ACCAAAAA
(miRNA)	3'	____________C_____CAUUAAC________	5'

UTR3

7mer

3394-3413

0.0230175782689701

Position on chromosome:

22:28377398-28377417

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3

Binding area:

(Transcript)	5'	UUUGUAUA___A_____CAACU__________A	3'
		________UGG__UAAA________UGGUUUU_
		________\|\|\|__.\|\|\|________\|\|\|\|\|\|\|_
		________ACC__GUUU________ACCAAAA_
(miRNA)	3'	___________AC____UCAUUAAC_______A	5'

UTR3

6mer

3337-3356

0.00300142546737853

Position on chromosome:

22:28377341-28377360

Conserved species:

panTro2,rheMac2,bosTau4,dasNov2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	UAUUAUUUU______CUCAAAAA______	3'
		_________UAAAAG________GUUUUU
		_________.\|\|\|\|\|________\|\|\|\|\|\|
		_________GUUUUC________CAAAAA
(miRNA)	3'	________C______AUUAACAC______	5'

UTR3

6mer

2546-2566

0.00144156905257507

Position on chromosome:

22:28376550-28376570

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	GACCUCA__AUC_CC______G_________A	3'
		_______GG___C__AGGUGG____GGUUUU_
		_______\|\|___\|__\|.\|\|..____\|\|\|\|\|\|_
		_______CC___G__UUCAUU____CCAAAA_
(miRNA)	3'	______A__AC__UU______AACA______A	5'

UTR3

7mer

2413-2432

0.00214921710143018

Position on chromosome:

22:28376417-28376436

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UUCUCCUGA__UCCAUCCUAGG________	3'
		_________GC____________GGUUUUU
		_________\|\|____________\|\|\|\|\|\|\|
		_________CG____________CCAAAAA
(miRNA)	3'	________A__UUUUCAUUAACA_______	5'

UTR3

7mer

1940-1958

0.00555573747216962

Position on chromosome:

22:28375944-28375962

Conserved species:

panTro2,rheMac2,bosTau4,canFam2,loxAfr3

Binding area:

(Transcript)	5'	AGUUACUCA___ACUCUAACC____________A	3'
		_________UGG______________UGGUUUU_
		_________\|\|\|______________\|\|\|\|\|\|\|_
		_________ACC______________ACCAAAA_
(miRNA)	3'	____________ACGUUUUCAUUAAC_______A	5'

UTR3

8mer

1879-1897

0.00391637878790994

Position on chromosome:

22:28375883-28375901

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	CUGAAGAGC___U___UUA_________A	3'
		_________CAA_GGU___UGUGGUUUU_
		_________\|\|\|_.\|\|___\|\|\|\|\|\|\|\|\|_
		_________GUU_UCA___ACACCAAAA_
(miRNA)	3'	________C___U___UUA_________A	5'

UTR3

8mer

1585-1604

0.00376311445113229

Position on chromosome:

22:28375589-28375608

Conserved species:

panTro2,rheMac2,canFam2

Binding area:

(Transcript)	5'	GGCUAAGAC________C___C____________	3'
		_________UGGU_CAG_GGU_____UGGUUUUU
		_________\|\|\|\|_\|\|._.\|\|_____\|\|\|\|\|\|\|\|
		_________ACCA_GUU_UCA_____ACCAAAAA
(miRNA)	3'	_____________C___U___UUAAC________	5'

UTR3

6mer

595-621

0.00326677132295231

Position on chromosome:

22:28374599-28374625

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	C___C__CACUG__AC___CUG______A	3'
		_GGU_CA_____AA__UUG___GGUUUU_
		_\|\|\|_\|\|_____\|\|__\|\|\|___\|\|\|\|\|\|_
		_CCA_GU_____UU__AAC___CCAAAA_
(miRNA)	3'	A___C__UUUCA_______A________A	5'

ENSG00000100154 (TTC28)

hsa-miR-3163

0.97067976812158

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

7mer

3805-3827

0.0124745049212212

Position on chromosome:

22:28377809-28377831

Conserved species:

panTro2,rheMac2,canFam2,dasNov2

Binding area:

(Transcript)	5'	UAAGAG__AUAUA___AG___CC_______	3'
		______GU_____UGC___UA__UUUUAUA
		______\|\|_____\|\|\|___.\|__\|\|\|\|\|\|\|
		______CA_____ACG___GU__AAAAUAU
(miRNA)	3'	________GAAUG___GGA___________	5'

UTR3

6mer

3392-3406

0.00647325132197559

Position on chromosome:

22:28377396-28377410

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,canFam2,dasNov2,loxAfr3

Binding area:

(Transcript)	5'	UGUAUAUGGAUAA__AA____G_______U	3'
		_____________AC___CUU_GUUUUAU_
		_____________\|\|___\|.\|_.\|\|\|\|\|\|_
		_____________UG___GGA_UAAAAUA_
(miRNA)	3'	____________A__ACG___G_______U	5'

UTR3

6mer

3155-3171

0.00207994133161866

Position on chromosome:

22:28377159-28377175

Conserved species:

panTro2,rheMac2,loxAfr3

Binding area:

(Transcript)	5'	CGCCUUCCAGG__C_________C______U	3'
		___________CU__CUGUUC_C_UUUUAU_
		___________\|\|__\|\|\|..\|_\|_\|\|\|\|\|\|_
		___________GA__GACGGG_G_AAAAUA_
(miRNA)	3'	__________A__AU______A_U______U	5'

UTR3

7mer

3138-3152

0.00229831175249029

Position on chromosome:

22:28377142-28377156

Conserved species:

panTro2,rheMac2,bosTau4,canFam2

Binding area:

(Transcript)	5'	UUCCCUUUUAUUA______GA________U	3'
		_____________GCUGCU___AUUUUAU_
		_____________.\|\|\|\|.___\|\|\|\|\|\|\|_
		_____________UGACGG___UAAAAUA_
(miRNA)	3'	____________A______GAG_______U	5'

UTR3

8mer

2769-2786

0.0183386187876842

Position on chromosome:

22:28376773-28376790

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,loxAfr3

Binding area:

(Transcript)	5'	GUUAGGGGUAA__AUUAA___________	3'
		___________CC_____UUUAUUUUAUA
		___________\|\|_____.\|.\|\|\|\|\|\|\|\|
		___________GG_____GAGUAAAAUAU
(miRNA)	3'	__________C__________________	5'

UTR3

6mer

2323-2344

0.00168307699969694

Position on chromosome:

22:28376327-28376348

Conserved species:

panTro2,rheMac2,canFam2,loxAfr3

Binding area:

(Transcript)	5'	UCCCAAC____AAAG__AAGUAC______	3'
		_______ACUG____CG______UUUAUA
		_______\|\|\|\|____\|.______\|\|\|\|\|\|
		_______UGAC____GU______AAAUAU
(miRNA)	3'	______A____GGGA__A___________	5'

UTR3

6mer

1876-1891

0.00142147228318293

Position on chromosome:

22:28375880-28375895

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	GAAGAGCCAAUGG_____G__G________	3'
		_____________UUUAU_UG_UUUUAUU_
		_____________.\|\|\|._\|\|_..\|.\|\|\|_
		_____________GAAUG_AC_GGAGUAA_
(miRNA)	3'	____________A________G_______A	5'

UTR3

7mer

115-139

0.0231358294797829

Position on chromosome:

22:28374119-28374143

Conserved species:

panTro2,rheMac2,rn4,mm9,bosTau4,canFam2,loxAfr3,galGal3,xenTro2,danRer6

Binding area:

(Transcript)	5'	CACC___U__AGACA___AACU_______	3'
		____AUU_CC_____UUA____UUUUAUA
		____\|.\|_\|\|_____\|.\|____\|\|\|\|\|\|\|
		____UGA_GG_____AGU____AAAAUAU
(miRNA)	3'	___A___C__G__________________	5'

ENSG00000100154 (TTC28)

hsa-miR-548d-3p

0.96959304552233

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

3681-3702

0.0341210841414563

Position on chromosome:

22:28377685-28377706

Conserved species:

panTro2,rheMac2,rn4,canFam2

Binding area:

(Transcript)	5'	AUUAGC____AAC_____AA_________A	3'
		______CAAA___AGAAA___UGGUUUUU_
		______\|\|\|\|___\|\|\|\|\|___\|\|\|\|\|\|\|\|_
		______GUUU___UCUUU___ACCAAAAA_
(miRNA)	3'	_____C____________GAC________C	5'

UTR3

6mer

3418-3440

0.00590337942105292

Position on chromosome:

22:28377422-28377444

Conserved species:

panTro2,rheMac2,rn4,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3

Binding area:

(Transcript)	5'	UGCUUU_____CAUU____ACCU______	3'
		______UAAAA____AUUG____UUUUUG
		______.\|\|\|\|____\|.\|\|____\|\|\|\|\|\|
		______GUUUU____UGAC____AAAAAC
(miRNA)	3'	_____C_____CUU_____ACC_______	5'

UTR3

6mer

3337-3356

0.00299462664911561

Position on chromosome:

22:28377341-28377360

Conserved species:

panTro2,rheMac2,bosTau4,dasNov2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	AUUAUUUU______CUCAAAAA______U	3'
		________UAAAAG________GUUUUU_
		________.\|\|\|\|\|________\|\|\|\|\|\|_
		________GUUUUC________CAAAAA_
(miRNA)	3'	_______C______UUUGACAC______C	5'

UTR3

7mer

2413-2419

0.00430475989002812

Position on chromosome:

22:28376417-28376423

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UCUCCUGAGCUCCAUCCUAGG_______A	3'
		_____________________GGUUUUU_
		_____________________\|\|\|\|\|\|\|_
		_____________________CCAAAAA_
(miRNA)	3'	____________________A_______C	5'

UTR3

8mer

1585-1608

0.00746840163836107

Position on chromosome:

22:28375589-28375612

Conserved species:

panTro2,rheMac2,canFam2

Binding area:

(Transcript)	5'	GCUA______GUCAGCGGUC________C	3'
		____AGACUG__________UGGUUUUU_
		____\|.\|\|\|\|__________\|\|\|\|\|\|\|\|_
		____UUUGAC__________ACCAAAAA_
(miRNA)	3'	___C________________________C	5'

UTR3

6mer

1524-1529

0.000827490192801588

Position on chromosome:

22:28375528-28375533

Conserved species:

panTro2

Binding area:

(Transcript)	5'	GUUAUAUAAGUAAUUACAUCAUA______	3'
		_______________________UUUUUG
		_______________________\|\|\|\|\|\|
		_______________________AAAAAC
(miRNA)	3'	______________________C______	5'

UTR3

6mer

1463-1490

0.000985773592185043

Position on chromosome:

22:28375467-28375494

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	U___U______C____CCUUUUUUUUUU______	3'
		_CAA_____AC__UGG____________UUUUUG
		_\|\|\|_____\|\|__\|\|\|____________\|\|\|\|\|\|
		_GUU_____UG__ACC____________AAAAAC
(miRNA)	3'	C___UUCUU__AC_____________________	5'

UTR3

6mer

1309-1314

0.00183298304378563

Position on chromosome:

22:28375313-28375318

Conserved species:

panTro2

Binding area:

(Transcript)	5'	CACCCACUACCAUGCCUUGCUAA______	3'
		_______________________UUUUUG
		_______________________\|\|\|\|\|\|
		_______________________AAAAAC
(miRNA)	3'	______________________C______	5'

UTR3

6mer

151-166

0.00885338565990449

Position on chromosome:

22:28374155-28374170

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,xenTro2

Binding area:

(Transcript)	5'	CCAUCUUUGGCCU_______ACUU______	3'
		_____________AC_GUGG