| | | Ensembl Gene Id | miRNA name | miTG score | Also Predicted | | | | |
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| | 1 | ENSG00000086289 (EPDR1) | hsa-miR-577 | 0.977456761218418 |   | |  | | |
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pubMed links: miRNA | gene | both
UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 6mer | 1069-1089 | 0.00258029078607521 | 2 | | | | | | | | | | | Position on chromosome: | 7:37991068-37991088 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | CUGCUUU____ACACUCAU______________U | 3' | | | _______CAGG________CCA_____UUAUCU_ | | | | _______||||________|||_____||||||_ | | | | _______GUCC________GGU_____AAUAGA_ | | | (miRNA) | 3' | ___________AU_________UAUAA______U | 5' |
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| | | | | | | | | UTR3 | 8mer | 1307-1325 | 0.0166234590749199 | 3 | | | | | | | | | | | Position on chromosome: | 7:37991306-37991324 | | Conserved species: | panTro2,rheMac2,loxAfr3 | | Binding area: | | (Transcript) | 5' | UAGAUGCUUC____GUU____________ | 3' | | | __________UACU___AUGUUUUAUCUG | | | | __________|||.___||.||||||||. | | | | __________AUGG___UAUAAAAUAGAU | | | (miRNA) | 3' | _________C____U______________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 1324-1336 | 0.0100253895190718 | 2 | | | | | | | | | | | Position on chromosome: | 7:37991323-37991335 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | CUGUUAUGUUUUAUC____CA__________U | 3' | | | _______________UGCC_____UUUAUCU_ | | | | _______________|.||_____|||||||_ | | | | _______________AUGG_____AAAUAGA_ | | | (miRNA) | 3' | ______________C____UUAUA_______U | 5' |
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| | | | | | | | | UTR3 | 8mer | 1393-1409 | 0.0430854657720998 | 5 | | | | | | | | | | | Position on chromosome: | 7:37991392-37991408 | | Conserved species: | panTro2,rheMac2,rn4,mm9,dasNov2 | | Binding area: | | (Transcript) | 5' | AAACAAUCUCAU____U___G________ | 3' | | | ____________UACU_AUA_UUUAUCUA | | | | ____________|||._|||_|||||||| | | | | ____________AUGG_UAU_AAAUAGAU | | | (miRNA) | 3' | ___________C____U___A________ | 5' |
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| | 2 | ENSG00000086289 (EPDR1) | hsa-miR-8063 | 0.974883790732888 |  | | | | |
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pubMed links: miRNA | gene | both
UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 9mer | 133-156 | 0.0432162806324969 | 5 | | | | | | | | | | | Position on chromosome: | 7:37990132-37990155 | | Conserved species: | panTro2,rheMac2,oryCun2,dasNov2,loxAfr3 | | Binding area: | | (Transcript) | 5' | AUGUG__________GUG___________ | 3' | | | _____GGGUUUUGAU___UCUGAUUUUGA | | | | _____..|....||.___.|||||||||| | | | | _____UUCGGGGCUG___GGACUAAAACU | | | (miRNA) | 3' | _______________A_____________ | 5' |
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| | | | | | | | | UTR3 | 8mer | 393-409 | 0.0199602230576831 | 2 | | | | | | | | | | | Position on chromosome: | 7:37990392-37990408 | | Conserved species: | panTro2,loxAfr3 | | Binding area: | | (Transcript) | 5' | AGUGAUAAUAAA____A____G____________ | 3' | | | ____________AAGC___GA____UGAUUUUGG | | | | ____________||||___||____||||||||. | | | | ____________UUCG___CU____ACUAAAACU | | | (miRNA) | 3' | ________________GGG__GAGG_________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 638-657 | 0.00732859708761753 | 2 | | | | | | | | | | | Position on chromosome: | 7:37990637-37990656 | | Conserved species: | panTro2,dasNov2 | | Binding area: | | (Transcript) | 5' | GUAAUUAUU____UAAAGAAAC_______ | 3' | | | _________CCUC_________AUUUUGA | | | | _________||.|_________||||||| | | | | _________GGGG_________UAAAACU | | | (miRNA) | 3' | ________C____CUGAGGAC________ | 5' |
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| | 3 | ENSG00000086289 (EPDR1) | hsa-miR-30d-5p | 0.935688223794465 | | | | | |
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| Gene details | | loading... | | | miRNA details | | loading... | |
pubMed links: miRNA | gene | both
UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 8mer | 157-176 | 0.0238844209189323 | 4 | | | | | | | | | | | Position on chromosome: | 7:37990156-37990175 | | Conserved species: | panTro2,oryCun2,dasNov2,loxAfr3 | | Binding area: | | (Transcript) | 5' | UGAUUUUGA___C__AAGCUC________ | 3' | | | _________CUA_UC______UGUUUACA | | | | _________|.|_||______|||||||| | | | | _________GGU_AG______ACAAAUGU | | | (miRNA) | 3' | ________A___C__CCCCU_________ | 5' |
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| | | | | | | | | UTR3 | 8mer | 1104-1130 | 0.0303299848824513 | 2 | | | | | | | | | | | Position on chromosome: | 7:37991103-37991129 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | C__G___A____UACCUUGU________U | 3' | | | _UU_GGU_CGGG________AUGUUUAC_ | | | | _|._.||_||||________||||||||_ | | | | _AG_UCA_GCCC________UACAAAUG_ | | | (miRNA) | 3' | A__G________C_______________U | 5' |
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| | | | | | | | | UTR3 | 7mer | 599-613 | 0.00484445280800378 | 0 | | | | | | | | | | | Position on chromosome: | 7:37989923-37989937 | | Conserved species: | Not Conserved | | Binding area: | | (Transcript) | 5' | UGGGUAUUAAAGA__CC______________C | 3' | | | _____________CC__UCGG___UGUUUAC_ | | | | _____________||__||||___|||||||_ | | | | _____________GG__AGCC___ACAAAUG_ | | | (miRNA) | 3' | ____________A__UC____CCU_______U | 5' |
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| | 4 | ENSG00000086289 (EPDR1) | hsa-miR-211-3p | 0.932394941295999 | | | | | |
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pubMed links: miRNA | gene | both
UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 6mer | 22-43 | 0.00195244264634355 | 0 | | | | | | | | | | | Position on chromosome: | 7:37990021-37990042 | | Conserved species: | Not Conserved | | Binding area: | | (Transcript) | 5' | AGCGGCA_____G_____A___CAGCC______ | 3' | | | _______GCAUC_____G_UGU_____CCCUGC | | | | _______|||.|_____|_|||_____|||||| | | | | _______CGUGG_____C_ACA_____GGGACG | | | (miRNA) | 3' | ____________GGAAA_G______________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 425-441 | 0.00934330515015956 | 2 | | | | | | | | | | | Position on chromosome: | 7:37990424-37990440 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | AUUUUAUUAUUA______AAAU_________ | 3' | | | ____________AUUCUU______UCCCUGC | | | | ____________|..|.|______||||||| | | | | ____________UGGGGA______AGGGACG | | | (miRNA) | 3' | ___________G______AACGAC_______ | 5' |
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| | | | | | | | | UTR3 | 9mer | 496-514 | 0.00766726441151567 | 1 | | | | | | | | | | | Position on chromosome: | 7:37990495-37990513 | | Conserved species: | panTro2 | | Binding area: | | (Transcript) | 5' | CACUGAGCCC______ACC___________ | 3' | | | __________UACUCC____CUGUCCCUGC | | | | __________.||.||____|||||||||| | | | | __________GUGGGG____GACAGGGACG | | | (miRNA) | 3' | _________C______AAAC__________ | 5' |
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| | | | | | | | | UTR3 | 8mer | 1206-1221 | 0.0346304939571301 | 2 | | | | | | | | | | | Position on chromosome: | 7:37991205-37991220 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | UGAAGAAUGCCA______C___________G | 3' | | | ____________GCCUCU___UUGUCCCUG_ | | | | ____________.||.||___.||||||||_ | | | | ____________UGGGGA___GACAGGGAC_ | | | (miRNA) | 3' | ___________G______AAC_________G | 5' |
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| | 5 | ENSG00000086289 (EPDR1) | hsa-miR-6833-3p | 0.931008161287059 | | | | | |
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| Gene details | | loading... | | | miRNA details | | loading... | |
pubMed links: miRNA | gene | both
UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 8mer | 78-102 | 0.0391507512873183 | 2 | | | | | | | | | | | Position on chromosome: | 7:37990077-37990101 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | UCAA__U___AAUGCUAAUU_________ | 3' | | | ____GA_GUG__________GGAGAGAAA | | | | ____||_|||__________.|||||||| | | | | ____CU_CAC__________UCUCUCUUU | | | (miRNA) | 3' | ___C__U___C__________________ | 5' |
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| | | | | | | | | UTR3 | 6mer | 316-336 | 0.00349552860772768 | 2 | | | | | | | | | | | Position on chromosome: | 7:37990315-37990335 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | UGCACAUA_________UC__UA_______ | 3' | | | ________GGGAAG_GG__AG__AGAGAAG | | | | ________.|||||_||__||__||||||. | | | | ________UCCUUC_CC__UC__UCUCUUU | | | (miRNA) | 3' | _______C______A_______________ | 5' |
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| | | | | | | | | UTR3 | 6mer | 442-447 | 0.00245392444151821 | 2 | | | | | | | | | | | Position on chromosome: | 7:37990441-37990446 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | UAUUAAUUCUUAAAUUCCCUGC______U | 3' | | | ______________________AGAGAA_ | | | | ______________________||||||_ | | | | ______________________UCUCUU_ | | | (miRNA) | 3' | _____________________C______U | 5' |
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| | | | | | | | | UTR3 | 6mer | 654-675 | 0.00320905157878354 | 2 | | | | | | | | | | | Position on chromosome: | 7:37990653-37990674 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | AACAUU_____C_____C__UUU______U | 3' | | | ______UUGAG_AAG_G_AG___AGAGAA_ | | | | ______.||||_|||_|_||___||||||_ | | | | ______GACUC_UUC_C_UC___UCUCUU_ | | | (miRNA) | 3' | ___________C___A_C___________U | 5' |
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| | | | | | | | | UTR3 | 6mer | 1342-1356 | 0.00492805276745857 | 4 | | | | | | | | | | | Position on chromosome: | 7:37991341-37991355 | | Conserved species: | panTro2,rheMac2,rn4,dasNov2 | | Binding area: | | (Transcript) | 5' | CAUUUAUCUUUCUU___UACC_________ | 3' | | | ______________AGU____AG_GAGAAA | | | | ______________|||____||_|||||| | | | | ______________UCA____UC_CUCUUU | | | (miRNA) | 3' | _____________U___CC____U______ | 5' |
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| | 6 | ENSG00000086289 (EPDR1) | hsa-miR-30b-5p | 0.926371434453135 | | | | | |
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| Gene details | | loading... | | | miRNA details | | loading... | |
pubMed links: miRNA | gene | both
UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 8mer | 164-176 | 0.0238544569067783 | 4 | | | | | | | | | | | Position on chromosome: | 7:37990163-37990175 | | Conserved species: | panTro2,oryCun2,dasNov2,loxAfr3 | | Binding area: | | (Transcript) | 5' | UGAUUUUGACUACUCA____C_________________ | 3' | | | ________________AGCU__________UGUUUACA | | | | ________________||||__________|||||||| | | | | ________________UCGA__________ACAAAUGU | | | (miRNA) | 3' | ____________________CUCACAUCCU________ | 5' |
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| | | | | | | | | UTR3 | 8mer | 1104-1130 | 0.0277739539918239 | 2 | | | | | | | | | | | Position on chromosome: | 7:37991103-37991129 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | C______AC___UACCUUGU________U | 3' | | | _UUGGGU__GGG________AUGUUUAC_ | | | | _.||.||__.||________||||||||_ | | | | _GACUCA__UCC________UACAAAUG_ | | | (miRNA) | 3' | C______CA___________________U | 5' |
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| | | | | | | | | UTR3 | 7mer | 586-613 | 0.0070254210565238 | 0 | | | | | | | | | | | Position on chromosome: | 7:37989910-37989937 | | Conserved species: | Not Conserved | | Binding area: | | (Transcript) | 5' | ______AUUAA__ACCCCUC_________C | 3' | | | _UGGGU_____AG_______GGUGUUUAC_ | | | | _||.||_____||_______|.|||||||_ | | | | _ACUCA_____UC_______CUACAAAUG_ | | | (miRNA) | 3' | G_____CA_____________________U | 5' |
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| | 7 | ENSG00000086289 (EPDR1) | hsa-miR-3182 | 0.918998218403313 | | | | | |
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| Gene details | | loading... | | | miRNA details | | loading... | |
pubMed links: miRNA | gene | both
UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 8mer | 155-180 | 0.0504021761360859 | 1 | | | | | | | | | | | Position on chromosome: | 7:37990154-37990179 | | Conserved species: | panTro2 | | Binding area: | | (Transcript) | 5' | UU______UCAAGCUCUGU_________A | 3' | | | __GACUAC___________UUACAGAAG_ | | | | __||||||___________.||||||||_ | | | | __CUGAUG___________GAUGUCUUC_ | | | (miRNA) | 3' | ________U___________________G | 5' |
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| | 8 | ENSG00000086289 (EPDR1) | hsa-miR-30a-5p | 0.916943023133189 | | | | | |
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| Gene details | | loading... | | | miRNA details | | loading... | |
pubMed links: miRNA | gene | both
UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 8mer | 157-176 | 0.0241086094237218 | 4 | | | | | | | | | | | Position on chromosome: | 7:37990156-37990175 | | Conserved species: | panTro2,oryCun2,dasNov2,loxAfr3 | | Binding area: | | (Transcript) | 5' | UGAUUUUGA___C__A__CUC________ | 3' | | | _________CUA_UC_AG___UGUUUACA | | | | _________|.|_||_||___|||||||| | | | | _________GGU_AG_UC___ACAAAUGU | | | (miRNA) | 3' | ________A___C__C__CU_________ | 5' |
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| | | | | | | | | UTR3 | 8mer | 1104-1130 | 0.0254420414756272 | 2 | | | | | | | | | | | Position on chromosome: | 7:37991103-37991129 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | C__G___A____UACCUUGU________U | 3' | | | _UU_GGU_CGGG________AUGUUUAC_ | | | | _|._.||_||.|________||||||||_ | | | | _AG_UCA_GCUC________UACAAAUG_ | | | (miRNA) | 3' | A__G________C_______________U | 5' |
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| | | | | | | | | UTR3 | 7mer | 599-613 | 0.00525073548576997 | 0 | | | | | | | | | | | Position on chromosome: | 7:37989923-37989937 | | Conserved species: | Not Conserved | | Binding area: | | (Transcript) | 5' | UGGGUAUUAAAGA__CC______________C | 3' | | | _____________CC__UCGG___UGUUUAC_ | | | | _____________||__|||.___|||||||_ | | | | _____________GG__AGCU___ACAAAUG_ | | | (miRNA) | 3' | ____________A__UC____CCU_______U | 5' |
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| | 9 | ENSG00000086289 (EPDR1) | hsa-miR-30c-5p | 0.914938123075785 | | | | | |
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| Gene details | | loading... | | | miRNA details | | loading... | |
pubMed links: miRNA | gene | both
UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 8mer | 153-176 | 0.0238347657880403 | 4 | | | | | | | | | | | Position on chromosome: | 7:37990152-37990175 | | Conserved species: | panTro2,oryCun2,dasNov2,loxAfr3 | | Binding area: | | (Transcript) | 5' | UGAUU____CUACUCA__CUC________ | 3' | | | _____UUGA_______AG___UGUUUACA | | | | _____.|||_______||___|||||||| | | | | _____GACU_______UC___ACAAAUGU | | | (miRNA) | 3' | ____C____CUCACA___CU_________ | 5' |
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| | | | | | | | | UTR3 | 8mer | 1104-1130 | 0.0251469767458547 | 2 | | | | | | | | | | | Position on chromosome: | 7:37991103-37991129 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | C_____UACGG___CCUU_U________U | 3' | | | _UUGGG_____GUA____G_AUGUUUAC_ | | | | _.||.|_____|||____|_||||||||_ | | | | _GACUC_____CAU____C_UACAAAUG_ | | | (miRNA) | 3' | C_____UCA__________C________U | 5' |
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| | | | | | | | | UTR3 | 7mer | 596-613 | 0.00683656571038118 | 0 | | | | | | | | | | | Position on chromosome: | 7:37989920-37989937 | | Conserved species: | Not Conserved | | Binding area: | | (Transcript) | 5' | UGGGUAUUAA___CCCCUC_________C | 3' | | | __________AGA______GGUGUUUAC_ | | | | __________|||______|.|||||||_ | | | | __________UCU______CUACAAAUG_ | | | (miRNA) | 3' | _________C___CACAUC_________U | 5' |
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| | 10 | ENSG00000086289 (EPDR1) | hsa-miR-30e-5p | 0.909721052108438 | | | | | |
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| Gene details | | loading... | | | miRNA details | | loading... | |
pubMed links: miRNA | gene | both
UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 8mer | 157-176 | 0.0246339526677887 | 4 | | | | | | | | | | | Position on chromosome: | 7:37990156-37990175 | | Conserved species: | panTro2,oryCun2,dasNov2,loxAfr3 | | Binding area: | | (Transcript) | 5' | UGAUUUUGA___C_____CUC________ | 3' | | | _________CUA_UCAAG___UGUUUACA | | | | _________|.|_|||||___|||||||| | | | | _________GGU_AGUUC___ACAAAUGU | | | (miRNA) | 3' | ________A___C_____CU_________ | 5' |
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| | | | | | | | | UTR3 | 8mer | 1111-1130 | 0.0233145677118508 | 2 | | | | | | | | | | | Position on chromosome: | 7:37991110-37991129 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | CUUGGGUA_G___ACCUU_U________U | 3' | | | ________C_GGU_____G_AUGUUUAC_ | | | | ________|_.||_____|_||||||||_ | | | | ________G_UCA_____C_UACAAAUG_ | | | (miRNA) | 3' | _______A_G___GUU___C________U | 5' |
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| | | | | | | | | UTR3 | 7mer | 599-613 | 0.00600926697909236 | 0 | | | | | | | | | | | Position on chromosome: | 7:37989923-37989937 | | Conserved species: | Not Conserved | | Binding area: | | (Transcript) | 5' | UGGGUAUUAAAGA__CC______________C | 3' | | | _____________CC__UCG___GUGUUUAC_ | | | | _____________||__||.___.|||||||_ | | | | _____________GG__AGU___UACAAAUG_ | | | (miRNA) | 3' | ____________A__UC___UCC________U | 5' |
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| | 11 | ENSG00000086289 (EPDR1) | hsa-miR-6721-5p | 0.904544204164004 | | | | | |
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pubMed links: miRNA | gene | both
UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 7mer | 1303-1329 | 0.0474595275670201 | 2 | | | | | | | | | | | Position on chromosome: | 7:37991302-37991328 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | UG_______UGUU___UUUUA________ | 3' | | | __CUUCUAC____AUG_____UCUGCCCA | | | | __||.||||____||._____.||||||| | | | | __GAGGAUG____UAU_____GGACGGGU | | | (miRNA) | 3' | _________U______UCGG_________ | 5' |
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| | 12 | ENSG00000086289 (EPDR1) | hsa-miR-335-3p | 0.899457778693614 | | | | | |
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pubMed links: miRNA | gene | both
UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 8mer | 604-616 | 0.0148058909713837 | 3 | | | | | | | | | | | Position on chromosome: | 7:37990603-37990615 | | Conserved species: | panTro2,rheMac2,loxAfr3 | | Binding area: | | (Transcript) | 5' | GAUAUAAACAUUUAGA__________________ | 3' | | | ________________AGGA_____AAUGAAAAG | | | | ________________||||_____||||||||. | | | | ________________UCCU_____UUACUUUUU | | | (miRNA) | 3' | _______________G____CGUUA_________ | 5' |
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| | | | | | | | | UTR3 | 8mer | 1374-1383 | 0.0317129843600934 | 1 | | | | | | | | | | | Position on chromosome: | 7:37991373-37991382 | | Conserved species: | panTro2 | | Binding area: | | (Transcript) | 5' | AUGUGUGACACCUAUAUU__________C | 3' | | | __________________AUAAUGAAAA_ | | | | __________________||||||||||_ | | | | __________________UAUUACUUUU_ | | | (miRNA) | 3' | _________________U__________U | 5' |
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| | 13 | ENSG00000086289 (EPDR1) | hsa-miR-3202 | 0.887781094131132 | | | | | |
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pubMed links: miRNA | gene | both
UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 9mer | 543-557 | 0.0352541034638817 | 1 | | | | | | | | | | | Position on chromosome: | 7:37990542-37990556 | | Conserved species: | loxAfr3 | | Binding area: | | (Transcript) | 5' | CAAAAAAAUGAUAA___AAA_________ | 3' | | | ______________CUU___UCCCUUCCA | | | | ______________|||___||||||||| | | | | ______________GAA___AGGGAAGGU | | | (miRNA) | 3' | _____________A___G___________ | 5' |
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| | | | | | | | | UTR3 | 6mer | 887-911 | 0.00302134657905323 | 3 | | | | | | | | | | | Position on chromosome: | 7:37990886-37990910 | | Conserved species: | rheMac2,oryCun2,loxAfr3 | | Binding area: | | (Transcript) | 5' | ACU_____UGCCCGCA____GG______U | 3' | | | ___GGGCU________CUUU__CCUUCC_ | | | | ___..|||________|||.__||||||_ | | | | ___UUCGA________GAAG__GGAAGG_ | | | (miRNA) | 3' | __U_________________AG______U | 5' |
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| | | | | | | | | UTR3 | 7mer | 943-960 | 0.00289589200068739 | 2 | | | | | | | | | | | Position on chromosome: | 7:37990942-37990959 | | Conserved species: | panTro2,loxAfr3 | | Binding area: | | (Transcript) | 5' | UCUCUGUCUGA_____GCAUC________ | 3' | | | ___________CUUCU_____UCCUUCCA | | | | ___________|||||_____.||||||| | | | | ___________GAAGA_____GGGAAGGU | | | (miRNA) | 3' | __________A__________________ | 5' |
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| | | | | | | | | UTR3 | 6mer | 1250-1277 | 0.0033381975372605 | 2 | | | | | | | | | | | Position on chromosome: | 7:37991249-37991276 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | G___G___AUUGCUAGGGAGAGA______ | 3' | | | _UUU_UCC_______________CUUCCA | | | | _.||_|||_______________|||||| | | | | _GAA_AGG_______________GAAGGU | | | (miRNA) | 3' | A___G________________________ | 5' |
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| | 14 | ENSG00000086289 (EPDR1) | hsa-miR-559 | 0.882708586287722 | | | | | |
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pubMed links: miRNA | gene | both
UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 8mer | 1113-1133 | 0.0436933202551631 | 7 | | | | | | | | | | | Position on chromosome: | 7:37991112-37991132 | | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,loxAfr3,echTel1 | | Binding area: | | (Transcript) | 5' | GGGUACG__UACCU______________U | 3' | | | _______GG_____UGUAUGUUUACUUU_ | | | | _______||_____||.||.||||||||_ | | | | _______CC_____ACGUAUAAAUGAAA_ | | | (miRNA) | 3' | ______A_____________________U | 5' |
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| | 15 | ENSG00000086289 (EPDR1) | hsa-miR-4698 | 0.871308422013272 | | | | | |
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pubMed links: miRNA | gene | both
UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 6mer | 131-141 | 0.0035269732458905 | 2 | | | | | | | | | | | Position on chromosome: | 7:37990130-37990140 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | GGAAGAUGCACAUUGAUG_______________________ | 3' | | | __________________UGGGG____________UUUUGA | | | | __________________|||||____________|||||| | | | | __________________ACCCC____________AAAACU | | | (miRNA) | 3' | _______________________AGAAGGAGAUGU______ | 5' |
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| | | | | | | | | UTR3 | 7mer | 131-156 | 0.0130264705084157 | 5 | | | | | | | | | | | Position on chromosome: | 7:37990130-37990155 | | Conserved species: | panTro2,rheMac2,oryCun2,dasNov2,loxAfr3 | | Binding area: | | (Transcript) | 5' | AUG_________GAUG_G____________ | 3' | | | ___UGGGGUUUU____U_UCUG_AUUUUGA | | | | ___||||||.||____._|||._||||||| | | | | ___ACCCCAGAA____G_AGAU_UAAAACU | | | (miRNA) | 3' | _________________G____G_______ | 5' |
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| | | | | | | | | UTR3 | 6mer | 403-409 | 0.00524129319940155 | 3 | | | | | | | | | | | Position on chromosome: | 7:37990402-37990408 | | Conserved species: | panTro2,rheMac2,loxAfr3 | | Binding area: | | (Transcript) | 5' | AGUGAUAAUAAAAAGCAGAGUG_______ | 3' | | | ______________________AUUUUGG | | | | ______________________||||||. | | | | ______________________UAAAACU | | | (miRNA) | 3' | _____________________G_______ | 5' |
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| | | | | | | | | UTR3 | 9mer | 636-657 | 0.0201701088749529 | 2 | | | | | | | | | | | Position on chromosome: | 7:37990635-37990656 | | Conserved species: | panTro2,dasNov2 | | Binding area: | | (Transcript) | 5' | GUAAUUA_______AAAGAA_________ | 3' | | | _______UUCCUCU______ACAUUUUGA | | | | _______|||||||______||||||||| | | | | _______AAGGAGA______UGUAAAACU | | | (miRNA) | 3' | ______G______________________ | 5' |
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| | 16 | ENSG00000086289 (EPDR1) | hsa-miR-6508-3p | 0.864160593376296 | | | | | |
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pubMed links: miRNA | gene | both
UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 9mer | 560-584 | 0.0388512088765772 | 3 | | | | | | | | | | | Position on chromosome: | 7:37990559-37990583 | | Conserved species: | panTro2,rn4,mm9 | | Binding area: | | (Transcript) | 5' | CAGA__UA____UUUUAUG__________ | 3' | | | ____CU__AGAA_______GCAUGGCCCA | | | | ____||__||||_______|||||||||| | | | | ____GA__UCUU_______CGUACCGGGU | | | (miRNA) | 3' | ___A________UA_______________ | 5' |
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| | | | | | | | | UTR3 | 8mer | 621-640 | 0.0155725058295236 | 0 | | | | | | | | | | | Position on chromosome: | 7:37989945-37989964 | | Conserved species: | Not Conserved | | Binding area: | | (Transcript) | 5' | ACCCCUCCA__CAC____CAG________ | 3' | | | _________AG___GUGC___AUGGCCCA | | | | _________||___.|||___|||||||| | | | | _________UC___UACG___UACCGGGU | | | (miRNA) | 3' | ________A__UU________________ | 5' |
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| | 17 | ENSG00000086289 (EPDR1) | hsa-miR-3125 | 0.858706698823136 | | | | | |
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UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 8mer | 617-643 | 0.0401998985811773 | 4 | | | | | | | | | | | Position on chromosome: | 7:37990616-37990642 | | Conserved species: | panTro2,rheMac2,mm9,oryCun2 | | Binding area: | | (Transcript) | 5' | AG__AAA____GAAGUAAUUA________ | 3' | | | __CU___AUAG__________UUCCUCUA | | | | __||___|.||__________|||||||| | | | | __GA___UGUC__________AAGGAGAU | | | (miRNA) | 3' | _A__GG_____G_________________ | 5' |
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| | 18 | ENSG00000086289 (EPDR1) | hsa-miR-6083 | 0.845651359068577 | | | | | |
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UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 6mer | 88-107 | 0.00769720833643446 | 3 | | | | | | | | | | | Position on chromosome: | 7:37990087-37990106 | | Conserved species: | panTro2,rheMac2,dasNov2 | | Binding area: | | (Transcript) | 5' | UGUGAAUG___AUU__AGAGAA______U | 3' | | | ________CUA___GG______AUAUAA_ | | | | ________|.|___.|______||||||_ | | | | ________GGU___UC______UAUAUU_ | | | (miRNA) | 3' | _______G___G____GGAGAC______C | 5' |
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| | | | | | | | | UTR3 | 8mer | 576-594 | 0.0244162895652369 | 3 | | | | | | | | | | | Position on chromosome: | 7:37990575-37990593 | | Conserved species: | panTro2,rheMac2,loxAfr3 | | Binding area: | | (Transcript) | 5' | AUUUUAUGG_______CAA_________A | 3' | | | _________CAUGGCC___UUGAUAUAA_ | | | | _________||..|||___.||||||||_ | | | | _________GUGUCGG___GACUAUAUU_ | | | (miRNA) | 3' | ________G_______A___________C | 5' |
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| | | | | | | | | UTR3 | 6mer | 1475-1491 | 0.00639159329997667 | 5 | | | | | | | | | | | Position on chromosome: | 7:37991474-37991490 | | Conserved species: | panTro2,rheMac2,oryCun2,dasNov2,loxAfr3 | | Binding area: | | (Transcript) | 5' | CAAUAAAUAUGG___A____GGU______ | 3' | | | ____________AUA_UCUU___UAUAAG | | | | ____________|.|_.||.___|||||| | | | | ____________UGU_GGAG___AUAUUC | | | (miRNA) | 3' | ___________G___C____ACU______ | 5' |
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| | 19 | ENSG00000086289 (EPDR1) | hsa-miR-377-3p | 0.836297702627893 | | | | | |
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UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 8mer | 1033-1056 | 0.0164660893105128 | 3 | | | | | | | | | | | Position on chromosome: | 7:37991032-37991055 | | Conserved species: | panTro2,rheMac2,loxAfr3 | | Binding area: | | (Transcript) | 5' | UUCUC____UAAUUAUUAAGC________ | 3' | | | _____ACAA____________UGUGUGAU | | | | _____||||____________|||||||| | | | | _____UGUU____________ACACACUA | | | (miRNA) | 3' | _________UUCAACGGAA__________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 1348-1363 | 0.0149647288366708 | 4 | | | | | | | | | | | Position on chromosome: | 7:37991347-37991362 | | Conserved species: | panTro2,rheMac2,rn4,dasNov2 | | Binding area: | | (Transcript) | 5' | UUUCUUAGUUAC______AAA___________C | 3' | | | ____________CAGGAG_______UGUGUGA_ | | | | ____________||..||_______|||||||_ | | | | ____________GUUUUC_______ACACACU_ | | | (miRNA) | 3' | ___________U______AACGGAA_______A | 5' |
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| | | | | | | | | UTR3 | 6mer | 1516-1534 | 0.00593088155495764 | 2 | | | | | | | | | | | Position on chromosome: | 7:37991515-37991533 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | GCUGUAAUAA_____________CA_______ | 3' | | | __________AUAAAG__UGCUU___UGUGAU | | | | __________|.|||.__|||.|___|||||| | | | | __________UGUUUU__ACGGA___ACACUA | | | (miRNA) | 3' | ________________CA_____AAC______ | 5' |
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| | 20 | ENSG00000086289 (EPDR1) | hsa-miR-6873-3p | 0.835908892836443 | | | | | |
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pubMed links: miRNA | gene | both
UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 7mer | 92-101 | 0.027016647586998 | 2 | | | | | | | | | | | Position on chromosome: | 7:37990091-37990100 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | GUCAAGAUGUGAAUGCUAA____________ | 3' | | | ___________________UUG_GAGAGAA_ | | | | ___________________.||_|||||||_ | | | | ___________________GAC_CUCUCUU_ | | | (miRNA) | 3' | ______________________U_______U | 5' |
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| | | | | | | | | UTR3 | 6mer | 315-335 | 0.00212332007923403 | 2 | | | | | | | | | | | Position on chromosome: | 7:37990314-37990334 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | AUGCACAU_________U___UA______ | 3' | | | ________AGGGAAGGG_CAG__AGAGAA | | | | ________||.|||.|._|||__|||||| | | | | ________UCUCUUUCU_GUC__UCUCUU | | | (miRNA) | 3' | _______C_____________________ | 5' |
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| | | | | | | | | UTR3 | 6mer | 438-447 | 0.00248615044791896 | 2 | | | | | | | | | | | Position on chromosome: | 7:37990437-37990446 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | UUAUUAAUUCUUAAAUUCC___C________ | 3' | | | ___________________CUG__AGAGAA_ | | | | ___________________|||__||||||_ | | | | ___________________GAC__UCUCUU_ | | | (miRNA) | 3' | ______________________UC______U | 5' |
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| | | | | | | | | UTR3 | 6mer | 654-675 | 0.00250508360347145 | 2 | | | | | | | | | | | Position on chromosome: | 7:37990653-37990674 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | AAACAUU_____C___________UUU______ | 3' | | | _______UUGAG_____AAGGCAG___AGAGAA | | | | _______.||||_____|||.|||___|||||| | | | | _______GACUC_____UUCUGUC___UCUCUU | | | (miRNA) | 3' | ____________UCUCU________________ | 5' |
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| | | | | | | | | UTR3 | 6mer | 1245-1272 | 0.00318412508662606 | 1 | | | | | | | | | | | Position on chromosome: | 7:37991244-37991271 | | Conserved species: | panTro2 | | Binding area: | | (Transcript) | 5' | G_____UUUGUCCAUUGCU___________ | 3' | | | _UUGAG_____________AGGGAGAGAC_ | | | | _.||||_____________||.||.||||_ | | | | _GACUC_____________UCUCUUUCUG_ | | | (miRNA) | 3' | _____________________________U | 5' |
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| | 21 | ENSG00000086289 (EPDR1) | hsa-miR-4282 | 0.826229161172376 | | | | | |
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pubMed links: miRNA | gene | both
UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 7mer | 92-112 | 0.0136120480683336 | 4 | | | | | | | | | | | Position on chromosome: | 7:37990091-37990111 | | Conserved species: | panTro2,mm9,dasNov2,loxAfr3 | | Binding area: | | (Transcript) | 5' | AAUGCUAA_____GAGAAAUAU_______ | 3' | | | ________UUGGA_________AAUUUUA | | | | ________.||||_________||||||| | | | | ________GACCU_________UUAAAAU | | | (miRNA) | 3' | _______G_____ACGU____________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 404-418 | 0.0103567049837717 | 2 | | | | | | | | | | | Position on chromosome: | 7:37990403-37990417 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | AAAAAGCAGAGUGA______UC__________ | 3' | | | ______________UUUUGG_____AAUUUUA | | | | ______________|..|||_____||||||| | | | | ______________AGGACC_____UUAAAAU | | | (miRNA) | 3' | ____________________UACGU_______ | 5' |
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| | | | | | | | | UTR3 | 7mer | 554-572 | 0.00582876433434362 | 1 | | | | | | | | | | | Position on chromosome: | 7:37990553-37990571 | | Conserved species: | panTro2 | | Binding area: | | (Transcript) | 5' | UUAAAUCCCU___AGACUUAA________ | 3' | | | __________UCC________GAAUUUUA | | | | __________|||________.||||||| | | | | __________AGG________UUUAAAAU | | | (miRNA) | 3' | _____________ACCUACG_________ | 5' |
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| | | | | | | | | UTR3 | 6mer | 1427-1435 | 0.00639068053166995 | 2 | | | | | | | | | | | Position on chromosome: | 7:37991426-37991434 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | CUAUAUUAAACAAAUUUAAU___________ | 3' | | | ____________________UGC__AUUUUA | | | | ____________________|||__|||||| | | | | ____________________ACG__UAAAAU | | | (miRNA) | 3' | ___________________U___UU______ | 5' |
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| | 22 | ENSG00000086289 (EPDR1) | hsa-miR-153-5p | 0.822237886707811 | | | | | |
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pubMed links: miRNA | gene | both
UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 8mer | 523-539 | 0.0319995301205663 | 2 | | | | | | | | | | | Position on chromosome: | 7:37990522-37990538 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | CUGCACUCCCUU_____________A________ | 3' | | | ____________GGUUGC_____CA_AAAAAUGA | | | | ____________.|.|||_____||_|||||||| | | | | ____________UCGACG_____GU_UUUUUACU | | | (miRNA) | 3' | __________________UUGUA__G________ | 5' |
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| | | | | | | | | UTR3 | 6mer | 586-612 | 0.00373837206805037 | 5 | | | | | | | | | | | Position on chromosome: | 7:37990585-37990611 | | Conserved species: | panTro2,rheMac2,oryCun2,dasNov2,loxAfr3 | | Binding area: | | (Transcript) | 5' | AA___AUAUA______UAGAA________ | 3' | | | __UUG_____AACAUU_____GGAAAUGA | | | | __.||_____|||||._____..|||||| | | | | __GAC_____UUGUAG_____UUUUUACU | | | (miRNA) | 3' | _C___G__________UG___________ | 5' |
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| | 23 | ENSG00000086289 (EPDR1) | hsa-miR-4474-5p | 0.821380481477868 | | | | | |
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pubMed links: miRNA | gene | both
UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 8mer | 53-73 | 0.0276923600854619 | 1 | | | | | | | | | | | Position on chromosome: | 7:37990052-37990072 | | Conserved species: | panTro2 | | Binding area: | | (Transcript) | 5' | GCCCCAGC__GAGA___A___________ | 3' | | | ________UG____UGG_UAUGAGACUAG | | | | ________||____||._.|||||||||. | | | | ________AC____ACU_GUACUCUGAUU | | | (miRNA) | 3' | __________ACAG___A___________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 800-822 | 0.00794984747919236 | 3 | | | | | | | | | | | Position on chromosome: | 7:37990799-37990821 | | Conserved species: | panTro2,oryCun2,dasNov2 | | Binding area: | | (Transcript) | 5' | UAGCA____ACAGGGAG___G_______U | 3' | | | _____CUGA________UCA_GAGACUA_ | | | | _____||||________|||_|||||||_ | | | | _____GACU________AGU_CUCUGAU_ | | | (miRNA) | 3' | ____A_______________A_______U | 5' |
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| | 24 | ENSG00000086289 (EPDR1) | hsa-miR-515-5p | 0.821102438391647 | | | | | |
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pubMed links: miRNA | gene | both
UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 6mer | 33-58 | 0.00337351724882982 | 2 | | | | | | | | | | | Position on chromosome: | 7:37990032-37990057 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | GU___CCCCC___GGCCCCAGC______U | 3' | | | __CAG_____UGC_________UGGAGA_ | | | | __|||_____|||_________||||||_ | | | | __GUC_____ACG_________ACCUCU_ | | | (miRNA) | 3' | _____UUUC____AAAGAAA________U | 5' |
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| | | | | | | | | UTR3 | 7mer | 77-99 | 0.025327305623671 | 2 | | | | | | | | | | | Position on chromosome: | 7:37990076-37990098 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | UAGUCA___U____AAUG__AA________ | 3' | | | ______AGA__GUG____CU__UUGGAGAG | | | | ______|||__|||____||__|||||||. | | | | ______UCU__CAC____GA__AACCUCUU | | | (miRNA) | 3' | _____G___UU___GAAA__A_________ | 5' |
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| | | | | | | | | UTR3 | 6mer | 1335-1355 | 0.00463839600012297 | 4 | | | | | | | | | | | Position on chromosome: | 7:37991334-37991354 | | Conserved species: | panTro2,rheMac2,dasNov2,echTel1 | | Binding area: | | (Transcript) | 5' | CCAUUUAU_______AGUUACCA______ | 3' | | | ________CUUUCUU________GGAGAA | | | | ________|||||||________|||||| | | | | ________GAAAGAA________CCUCUU | | | (miRNA) | 3' | _______C_______AA____________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 630-649 | 0.0138443079548179 | 0 | | | | | | | | | | | Position on chromosome: | 7:37989954-37989973 | | Conserved species: | Not Conserved | | Binding area: | | (Transcript) | 5' | AGCACGUGC____UG____CCAAC_________ | 3' | | | _________CAGA____GC_______UGGAGAA | | | | _________||||____||_______||||||| | | | | _________GUCU____CG_______ACCUCUU | | | (miRNA) | 3' | _____________UUCA__AAAGAAA_______ | 5' |
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| | 25 | ENSG00000086289 (EPDR1) | hsa-miR-298 | 0.814657225203584 | | | | | |
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pubMed links: miRNA | gene | both
UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 6mer | 263-277 | 0.00363728647844532 | 2 | | | | | | | | | | | Position on chromosome: | 7:37990262-37990276 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | UAAUGCCUGUUCA___CU__G________A | 3' | | | _____________GGG___G_UUUUCUGC_ | | | | _____________|||___._.|..||||_ | | | | _____________CCC___U_GAGGGACG_ | | | (miRNA) | 3' | ____________A___UCU_G________A | 5' |
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| | | | | | | | | UTR3 | 7mer | 928-949 | 0.0219718870902813 | 6 | | | | | | | | | | | Position on chromosome: | 7:37990927-37990948 | | Conserved species: | panTro2,rheMac2,canFam2,dasNov2,loxAfr3,echTel1 | | Binding area: | | (Transcript) | 5' | CUUCAU__________UCUGA_______A | 3' | | | ______AACCUCUCUG_____CUUCUGC_ | | | | ______||||||.|||_____|||||||_ | | | | ______UUGGAGGGAC_____GAAGACG_ | | | (miRNA) | 3' | _____C______________________A | 5' |
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| | | | | | | | | UTR3 | 7mer | 1045-1066 | 0.00929481054312153 | 2 | | | | | | | | | | | Position on chromosome: | 7:37991044-37991065 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | AAUUAUU__G__G_G__AUAA________ | 3' | | | _______AA_CU_U_UG____UUUCUGCU | | | | _______||_||_._||____.||||||| | | | | _______UU_GA_G_AC____GAAGACGA | | | (miRNA) | 3' | ______C__G__G_G______________ | 5' |
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| | 26 | ENSG00000086289 (EPDR1) | hsa-miR-505-3p | 0.813342918435065 | | | | | |
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pubMed links: miRNA | gene | both
UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 7mer | 345-367 | 0.03476210513879 | 2 | | | | | | | | | | | Position on chromosome: | 7:37990344-37990366 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | GCCUU_G_______UAUUUAU_______A | 3' | | | _____G_CAGCAAG_______UGUUGAC_ | | | | _____._|||||||_______|||||||_ | | | | _____U_GUCGUUC_______ACAACUG_ | | | (miRNA) | 3' | ____U_G_____________________C | 5' |
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| | 27 | ENSG00000086289 (EPDR1) | hsa-miR-944 | 0.812635115662129 | | | | | |
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pubMed links: miRNA | gene | both
UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 7mer | 88-110 | 0.011353265583487 | 4 | | | | | | | | | | | Position on chromosome: | 7:37990087-37990109 | | Conserved species: | panTro2,rheMac2,dasNov2,loxAfr3 | | Binding area: | | (Transcript) | 5' | UGAAUG__A___G__GAGAAAU_______ | 3' | | | ______CU_AUU_GA_______AUAAUUU | | | | ______||_||._||_______||||||| | | | | ______GA_UAG_CU_______UAUUAAA | | | (miRNA) | 3' | ________G___G__ACAUGU________ | 5' |
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| | | | | | | | | UTR3 | 8mer | 1021-1041 | 0.0175775482545264 | 2 | | | | | | | | | | | Position on chromosome: | 7:37991020-37991040 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | UCUUGAG___G_AUUUCUC_________A | 3' | | | _______CAU_C_______ACAAUAAUU_ | | | | _______|||_|_______|||||||||_ | | | | _______GUA_G_______UGUUAUUAA_ | | | (miRNA) | 3' | ______A___G_CUACA___________A | 5' |
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| | | | | | | | | UTR3 | 7mer | 1048-1061 | 0.00575520299431205 | 3 | | | | | | | | | | | Position on chromosome: | 7:37991047-37991060 | | Conserved species: | panTro2,rheMac2,loxAfr3 | | Binding area: | | (Transcript) | 5' | ACAAUAAUUAUUAAG_________________ | 3' | | | _______________CUG_UGUG__AUAAUUU | | | | _______________|.|_|||.__||||||| | | | | _______________GGC_ACAU__UAUUAAA | | | (miRNA) | 3' | ______________A___U____GU_______ | 5' |
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| | 28 | ENSG00000086289 (EPDR1) | hsa-miR-936 | 0.811886968808827 | | | | | |
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pubMed links: miRNA | gene | both
UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 8mer | 1291-1312 | 0.0308495660776943 | 2 | | | | | | | | | | | Position on chromosome: | 7:37991290-37991311 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | AAAUUUA__________AGA_G__________ | 3' | | | _______CU___AUUCU___U_CUUCUACUGU | | | | _______||___||||.___|_|.|||||||| | | | | _______GA___UAAGG___A_GGAGAUGACA | | | (miRNA) | 3' | _________CGC_________G__________ | 5' |
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| | | | | | | | | UTR3 | 6mer | 1438-1454 | 0.00375626553506671 | 0 | | | | | | | | | | | Position on chromosome: | 7:37991437-37991453 | | Conserved species: | Not Conserved | | Binding area: | | (Transcript) | 5' | UUGCAUUUUAAA__________GA________ | 3' | | | ____________GC_AUUCUUU____UACUGU | | | | ____________||_||||.|.____|||||| | | | | ____________CG_UAAGGAG____AUGACA | | | (miRNA) | 3' | ___________A__C_______GGAG______ | 5' |
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| | 29 | ENSG00000086289 (EPDR1) | hsa-miR-4528 | 0.808150157307423 | | | | | |
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| Gene details | | loading... | | | miRNA details | | loading... | |
pubMed links: miRNA | gene | both
UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 6mer | 283-299 | 0.00294904901595159 | 0 | | | | | | | | | | | Position on chromosome: | 7:37990282-37990298 | | Conserved species: | Not Conserved | | Binding area: | | (Transcript) | 5' | UUCUGCAUGCA___________C______C | 3' | | | ___________CGGGU_AUACA_AUAAUG_ | | | | ___________|.|.|_|||||_||||||_ | | | | ___________GUCUA_UAUGU_UAUUAC_ | | | (miRNA) | 3' | __________G_____G_____A______U | 5' |
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| | | | | | | | | UTR3 | 8mer | 1366-1380 | 0.031259898622683 | 1 | | | | | | | | | | | Position on chromosome: | 7:37991365-37991379 | | Conserved species: | panTro2 | | Binding area: | | (Transcript) | 5' | AGAAAUGUGUGACA____________________ | 3' | | | ______________CC____UAUAU_UAUAAUGA | | | | ______________||____.|||._|||||||| | | | | ______________GG____GUAUG_AUAUUACU | | | (miRNA) | 3' | _____________A__UCUA_____U________ | 5' |
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| | 30 | ENSG00000086289 (EPDR1) | hsa-miR-1256 | 0.803627172594811 | | | | | |
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pubMed links: miRNA | gene | both
UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 7mer | 237-257 | 0.00592806681816017 | 2 | | | | | | | | | | | Position on chromosome: | 7:37990236-37990256 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | UAUGGACA__U_____UAUUUC________ | 3' | | | ________CU__UGGG______UAAUGCCU | | | | ________||__||.|______.||||||| | | | | ________GA__ACUC______GUUACGGA | | | (miRNA) | 3' | _______C__UC____UUCA__________ | 5' |
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| | | | | | | | | UTR3 | 6mer | 438-451 | 0.00412204008584033 | 2 | | | | | | | | | | | Position on chromosome: | 7:37990437-37990450 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | AAUUCUUAAAUUCC___CA______________C | 3' | | | ______________CUG__GAG_____AAUGCC_ | | | | ______________||.__|||_____||||||_ | | | | ______________GAU__CUC_____UUACGG_ | | | (miRNA) | 3' | _____________C___CA___UUCAG______A | 5' |
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| | | | | | | | | UTR3 | 8mer+wobble | 1150-1177 | 0.0200559702754028 | 5 | | | | | | | | | | | Position on chromosome: | 7:37991149-37991176 | | Conserved species: | panTro2,rheMac2,oryCun2,canFam2,dasNov2 | | Binding area: | | (Transcript) | 5' | ___A____CCU__CACAU__________C | 3' | | | AGC_AGUG___GG_____AGUCAGUGCC_ | | | | |||_||||___|._____|||||.||||_ | | | | UCG_UCAC___CU_____UCAGUUACGG_ | | | (miRNA) | 3' | ___A____U___________________A | 5' |
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| | | | | | | | | UTR3 | 6mer | 1192-1204 | 0.00363029381219254 | 4 | | | | | | | | | | | Position on chromosome: | 7:37991191-37991203 | | Conserved species: | panTro2,rheMac2,canFam2,echTel1 | | Binding area: | | (Transcript) | 5' | CCUAAGUAUUCGUAG_________________A | 3' | | | _______________AGUGA__AG__AAUGCC_ | | | | _______________|||||__||__||||||_ | | | | _______________UCACU__UC__UUACGG_ | | | (miRNA) | 3' | ______________A_____CU__AG______A | 5' |
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