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| | | Ensembl Gene Id | miRNA name | miTG score | Also Predicted | | | | | | | | 1 | ENSG00000074201 (CLNS1A) | hsa-miR-3692-5p | 0.971996473867196 |   | |  | | | | Gene details  | | loading... | | | miRNA details | | loading... | |
pubMed links: miRNA | gene | both
UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 8mer | 2019-2041 | 0.0445217232065096 | 8 | | | | | | | | | | | Position on chromosome: | 11:77327594-77327616 | | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,canFam2,loxAfr3,monDom5 | | Binding area: | | (Transcript) | 5' | UACUG__ACAA__AG____UC________A | 3' | | | _____AG____CA___UUG__ACCAGCAG_ | | | | _____||____||___.||__||||||||_ | | | | _____UC____GU___GAC__UGGUCGUC_ | | | (miRNA) | 3' | ____G__AUAG__GAG_____________C | 5' |
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| | | | | | | | | UTR3 | 8mer | 830-851 | 0.0180496218552264 | 2 | | | | | | | | | | | Position on chromosome: | 11:77326405-77326426 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | AUCAUA___CCUUA_________________C | 3' | | | ______CAG_____CCAC_CU__ACCAGCAG_ | | | | ______|||_____||||_|.__||||||||_ | | | | ______GUC_____GGUG_GG__UGGUCGUC_ | | | (miRNA) | 3' | _________AUA______A__AC________C | 5' |
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| | | | | | | | | UTR3 | 6mer | 827-851 | 0.00149060786283344 | 2 | | | | | | | | | | | Position on chromosome: | 11:77326402-77326426 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | AUA___CCUUA____CUA_____G______A | 3' | | | ___CAG_____CCAC___CC__A_CAGCAG_ | | | | ___|||_____||||___||__|_||||||_ | | | | ___GUC_____GGUG___GG__U_GUCGUC_ | | | (miRNA) | 3' | ______AUA______A____AC_G______C | 5' |
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| | | | | | | | | UTR3 | 6mer | 362-379 | 0.0046161703255579 | 2 | | | | | | | | | | | Position on chromosome: | 11:77325937-77325954 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | GAAAAUAGAAG____GAAAAAAG______ | 3' | | | ___________CUGA________AGCAGG | | | | ___________||||________|||||| | | | | ___________GACU________UCGUCC | | | (miRNA) | 3' | __________G____GG____________ | 5' |
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| | | | | 2 | ENSG00000074201 (CLNS1A) | hsa-miR-5096 | 0.948380896528323 | | | | | | | | Gene details | | loading... | | | miRNA details | | loading... | |
pubMed links: miRNA | gene | both
UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 8mer | 1847-1869 | 0.0309513737109488 | 5 | | | | | | | | | | | Position on chromosome: | 11:77327422-77327444 | | Conserved species: | panTro2,rheMac2,mm9,oryCun2,loxAfr3 | | Binding area: | | (Transcript) | 5' | UGUAA___AGCA____U___________A | 3' | | | _____GCU____GAUC_AUGUGGUGAAA_ | | | | _____||.____||.|_|..||||||||_ | | | | _____CGG____CUGG_UGUACCACUUU_ | | | (miRNA) | 3' | ________A_______U___________G | 5' |
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| | | | | | | | | UTR3 | 7mer | 10-29 | 0.0273294255613952 | 2 | | | | | | | | | | | Position on chromosome: | 11:77325585-77325604 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | UGAGACCA____________C_______A | 3' | | | ________GCCUGGCCAAUA_GGUGAAA_ | | | | ________|||||.||||.|_|||||||_ | | | | ________CGGACUGGUUGU_CCACUUU_ | | | (miRNA) | 3' | ____________________A_______G | 5' |
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| | | | | 3 | ENSG00000074201 (CLNS1A) | hsa-miR-6787-3p | 0.946230337940946 | | | | | | | | Gene details | | loading... | | | miRNA details | | loading... | |
pubMed links: miRNA | gene | both
UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 6mer | 2039-2060 | 0.00384962923663047 | 4 | | | | | | | | | | | Position on chromosome: | 11:77327614-77327635 | | Conserved species: | panTro2,rheMac2,bosTau4,canFam2 | | Binding area: | | (Transcript) | 5' | GUUCUUU__U__________ACUAUA______ | 3' | | | _______CU_GAGA___CAG______CUGAGA | | | | _______||_||||___|||______|||||| | | | | _______GA_CUCU___GUC______GACUCU | | | (miRNA) | 3' | _________C____CCC___GUC_________ | 5' |
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| | | | | | | | | UTR3 | 6mer | 1039-1060 | 0.00230776420200974 | 2 | | | | | | | | | | | Position on chromosome: | 11:77326614-77326635 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | CUUGAAA____AACUAAAAUUUA______ | 3' | | | _______UGGA____________CUGAGA | | | | _______||||____________|||||| | | | | _______ACCU____________GACUCU | | | (miRNA) | 3' | ______G____CUCCCGUCGUC_______ | 5' |
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| | | | | | | | | UTR3 | 8mer | 374-392 | 0.0512077064983761 | 2 | | | | | | | | | | | Position on chromosome: | 11:77325949-77325967 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | CCGUAGCAUU____AAA___A________ | 3' | | | __________GAGA___UAG_AGCUGAGA | | | | __________||||___.||_|||||||| | | | | __________CUCU___GUC_UCGACUCU | | | (miRNA) | 3' | _________C____CCC___G________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 590-613 | 0.00598670569761599 | 0 | | | | | | | | | | | Position on chromosome: | 11:77348636-77348659 | | Conserved species: | Not Conserved | | Binding area: | | (Transcript) | 5' | CGGCA____UACCCUUUA__U_________ | 3' | | | _____CUGG_________CA_C_GCUGAGA | | | | _____||||_________||_|_||||||| | | | | _____GACC_________GU_G_CGACUCU | | | (miRNA) | 3' | _________UCUCCC_____C_U_______ | 5' |
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| | | | | 4 | ENSG00000074201 (CLNS1A) | hsa-miR-6071 | 0.93877424483601 | | | | | | | | Gene details | | loading... | | | miRNA details | | loading... | |
pubMed links: miRNA | gene | both
UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 8mer | 2017-2029 | 0.0386237604624465 | 7 | | | | | | | | | | | Position on chromosome: | 11:77327592-77327604 | | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,canFam2,monDom5 | | Binding area: | | (Transcript) | 5' | ACUGAGACAACAAGUU___AC________ | 3' | | | ________________GUC__CAGCAGAA | | | | ________________|.|__|||||||| | | | | ________________CGG__GUCGUCUU | | | (miRNA) | 3' | _______________C___CC________ | 5' |
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| | | | | | | | | UTR3 | 6mer | 1861-1876 | 0.00299861625553105 | 2 | | | | | | | | | | | Position on chromosome: | 11:77327436-77327451 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | CUGUGUGCAUCA____UAA_C_______U | 3' | | | ____________UUUG___G_UAGCAGA_ | | | | ____________.|||___|_.||||||_ | | | | ____________GAAC___C_GUCGUCU_ | | | (miRNA) | 3' | ___________G____CGG_C_______U | 5' |
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| | | | | | | | | UTR3 | 9mer | 825-849 | 0.0127815835120107 | 2 | | | | | | | | | | | Position on chromosome: | 11:77326400-77326424 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | UACA_____ACCACCUA__A_________ | 3' | | | ____GCCUU________CC_GCAGCAGAA | | | | ____|||||________||_||||||||| | | | | ____CGGAA________GG_CGUCGUCUU | | | (miRNA) | 3' | _________CC________C_________ | 5' |
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| | | | | | | | | UTR3 | 8mer | 174-190 | 0.0179876702903382 | 0 | | | | | | | | | | | Position on chromosome: | 11:77333651-77333667 | | Conserved species: | Not Conserved | | Binding area: | | (Transcript) | 5' | AAGAAGGAUUAU__CAU___AA________ | 3' | | | ____________CC____CU__CAGCAGAA | | | | ____________||____|.__|||||||| | | | | ____________GG____GG__GUCGUCUU | | | (miRNA) | 3' | ___________C__AACC__CC________ | 5' |
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| | | | | 5 | ENSG00000074201 (CLNS1A) | hsa-miR-95-5p | 0.934754057873859 | | | | | | | | Gene details | | loading... | | | miRNA details | | loading... | |
pubMed links: miRNA | gene | both
UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 9mer | 309-330 | 0.0542153269696964 | 3 | | | | | | | | | | | Position on chromosome: | 11:77325884-77325905 | | Conserved species: | panTro2,rheMac2,loxAfr3 | | Binding area: | | (Transcript) | 5' | AUAAUGA_____C____AAU_________ | 3' | | | _______UCAGC_AGAC___AUUUAUUGA | | | | _______|||.|_||||___||||||||| | | | | _______AGUUG_UCUG___UAAAUAACU | | | (miRNA) | 3' | ______A______________________ | 5' |
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| | | | | 6 | ENSG00000074201 (CLNS1A) | hsa-miR-4430 | 0.934664160380658 | | | | | | | | Gene details | | loading... | | | miRNA details | | loading... | |
pubMed links: miRNA | gene | both
UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 8mer | 1740-1757 | 0.0425275281245562 | 2 | | | | | | | | | | | Position on chromosome: | 11:77327315-77327332 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | CUUAGGUUGUA___U__AAU_________ | 3' | | | ___________UCC_UU___UUCCAGCCU | | | | ___________|||_.|___.|||||||| | | | | ___________AGG_GA___GAGGUCGGA | | | (miRNA) | 3' | __________G___C__GU__________ | 5' |
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| | | | | | | | | UTR3 | 6mer | 846-871 | 0.00425456591808644 | 4 | | | | | | | | | | | Position on chromosome: | 11:77326421-77326446 | | Conserved species: | panTro2,rheMac2,bosTau4,dasNov2 | | Binding area: | | (Transcript) | 5' | AGC__G_____UAAA__AUCAUA______ | 3' | | | ___CU_UGCUU____AC______CAGCCU | | | | ___||_.|||.____||______|||||| | | | | ___GA_GCGAG____UG______GUCGGA | | | (miRNA) | 3' | _____G___________AG__________ | 5' |
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| | | | | | | | | UTR3 | 6mer | 113-135 | 0.00324652953057014 | 1 | | | | | | | | | | | Position on chromosome: | 11:77325688-77325710 | | Conserved species: | panTro2 | | Binding area: | | (Transcript) | 5' | AUGUA______AAGAUAUGGUC______G | 3' | | | _____UUCAUU___________CCAGCC_ | | | | _____.|||.|___________||||||_ | | | | _____GAGUGA___________GGUCGG_ | | | (miRNA) | 3' | ____C_______________________A | 5' |
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| | | | | | | | | UTR3 | 7mer | 26-46 | 0.00416262788074268 | 2 | | | | | | | | | | | Position on chromosome: | 11:77325601-77325621 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | ACUUGAGG__AGGA____G_GA_______ | 3' | | | ________UC____GUUU_A__CCAGCCU | | | | ________||____|.|._|__||||||| | | | | ________AG____CGAG_U__GGUCGGA | | | (miRNA) | 3' | _______G__G_________GA_______ | 5' |
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| | | | | 7 | ENSG00000074201 (CLNS1A) | hsa-miR-197-3p | 0.933968456806203 | | | | | | | | Gene details | | loading... | | | miRNA details | | loading... | |
pubMed links: miRNA | gene | both
UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 8mer | 1848-1869 | 0.0461003779930734 | 5 | | | | | | | | | | | Position on chromosome: | 11:77327423-77327444 | | Conserved species: | panTro2,rheMac2,mm9,oryCun2,loxAfr3 | | Binding area: | | (Transcript) | 5' | UUUGUAA___A____C___UCUAU________ | 3' | | | _______GCU____G_AGA_____GUGGUGAA | | | | _______|||____|_|||_____|||||||| | | | | _______CGA____C_UCU_____CACCACUU | | | (miRNA) | 3' | __________CCCA_C___UC___________ | 5' |
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| | | | | | | | | UTR3 | 6mer | 11-27 | 0.00607783769027063 | 2 | | | | | | | | | | | Position on chromosome: | 11:77325586-77325602 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | UUUGAGACCAGC____CCAAUAC__________ | 3' | | | ____________CUGG___________GGUGAA | | | | ____________||||___________|||||| | | | | ____________GACC___________CCACUU | | | (miRNA) | 3' | ___________C____CACCUCUUCCA______ | 5' |
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| | | | | | | | | UTR3 | 7mer | 466-491 | 0.0289531146829741 | 0 | | | | | | | | | | | Position on chromosome: | 11:77340822-77340847 | | Conserved species: | Not Conserved | | Binding area: | | (Transcript) | 5' | CUA______CAUUUGUAUGUUA_______ | 3' | | | ___GGAGAG_____________UGGUGAA | | | | ___|||||._____________||||||| | | | | ___CCUCUU_____________ACCACUU | | | (miRNA) | 3' | __A______CC__________________ | 5' |
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| | | | | 8 | ENSG00000074201 (CLNS1A) | hsa-miR-651-3p | 0.933041178040616 | | | | | | | | Gene details | | loading... | | | miRNA details | | loading... | |
pubMed links: miRNA | gene | both
UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 8mer | 2089-2102 | 0.0169066749075657 | 2 | | | | | | | | | | | Position on chromosome: | 11:77327664-77327677 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | AGUGAAGUUAAUGAA__U____U_________ | 3' | | | _______________AG____C_UUUUCCUUU | | | | _______________||____|_.|||||||| | | | | _______________UC____G_GAAAGGAAA | | | (miRNA) | 3' | ______________A__CUAU_U_________ | 5' |
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| | | | | | | | | UTR3 | 6mer | 1801-1826 | 0.00296252277478136 | 2 | | | | | | | | | | | Position on chromosome: | 11:77327376-77327401 | | Conserved species: | panTro2,bosTau4 | | Binding area: | | (Transcript) | 5' | AGA__GCG____AAAGAGAGAGC______ | 3' | | | ___CU___GGGG___________UCCUUU | | | | ___||___.||.___________|||||| | | | | ___GA___UCCU___________AGGAAA | | | (miRNA) | 3' | _____AAA____AUGUGAA__________ | 5' |
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| | | | | | | | | UTR3 | 6mer | 1752-1770 | 0.00410795626841934 | 3 | | | | | | | | | | | Position on chromosome: | 11:77327327-77327345 | | Conserved species: | panTro2,rheMac2,bosTau4 | | Binding area: | | (Transcript) | 5' | CUGUUAUAAC__C_____U_____________ | 3' | | | __________CU_UUAGG_UGUA___UCCUUU | | | | __________||_|||||_|..|___|||||| | | | | __________GA_AAUCC_AUGU___AGGAAA | | | (miRNA) | 3' | ____________A_____U____GAA______ | 5' |
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| | | | | | | | | UTR3 | 7mer | 1412-1432 | 0.00696228038771678 | 2 | | | | | | | | | | | Position on chromosome: | 11:77326987-77327007 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | CAUUUCAG_____UUCUGC___________ | 3' | | | ________GGGAU______CAC_UUCCUUU | | | | ________.||||______|||_||||||| | | | | ________UCCUA______GUG_AAGGAAA | | | (miRNA) | 3' | _______A_____U________A_______ | 5' |
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| | | | | | | | | UTR3 | 8mer | 1126-1139 | 0.0133037910891645 | 3 | | | | | | | | | | | Position on chromosome: | 11:77326701-77326714 | | Conserved species: | panTro2,rheMac2,canFam2 | | Binding area: | | (Transcript) | 5' | GUAGACUGAAAAAAA___AA_________ | 3' | | | _______________ACG__UUUUCCUUU | | | | _______________||.__.|||||||| | | | | _______________UGU__GAAAGGAAA | | | (miRNA) | 3' | ______________A______________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 632-656 | 0.00951858801430156 | 3 | | | | | | | | | | | Position on chromosome: | 11:77326207-77326231 | | Conserved species: | panTro2,rheMac2,loxAfr3 | | Binding area: | | (Transcript) | 5' | AAUA____AAAUUC____UGAG_______ | 3' | | | ____UUAG______CAUU____UUCCUUU | | | | ____||||______||.|____||||||| | | | | ____AAUC______GUGA____AAGGAAA | | | (miRNA) | 3' | ___A____CUAU_________________ | 5' |
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| | | | | 9 | ENSG00000074201 (CLNS1A) | hsa-miR-378a-5p | 0.916377463806997 | | | | | | | | Gene details | | loading... | | | miRNA details | | loading... | |
pubMed links: miRNA | gene | both
UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 6mer | 1836-1862 | 0.00397861226385788 | 4 | | | | | | | | | | | Position on chromosome: | 11:77327411-77327437 | | Conserved species: | panTro2,rheMac2,oryCun2,loxAfr3 | | Binding area: | | (Transcript) | 5' | CA_____AUGU__UGAAAAUGCA______ | 3' | | | __GAUCU____GG__________CAGGAG | | | | __||.||____||__________|||||| | | | | __CUGGA____CC__________GUCCUC | | | (miRNA) | 3' | _C___________UCA_____________ | 5' |
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| | | | | | | | | UTR3 | 8mer | 675-690 | 0.018863308255409 | 1 | | | | | | | | | | | Position on chromosome: | 11:77326250-77326265 | | Conserved species: | rheMac2 | | Binding area: | | (Transcript) | 5' | UUGUCCAUUCUU___UA______________C | 3' | | | ____________CAG__AUC___AGUCAGGA_ | | | | ____________|||__|.|___||||||||_ | | | | ____________GUC__UGG___UCAGUCCU_ | | | (miRNA) | 3' | ___________U___C____ACC________C | 5' |
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| | | | | | | | | UTR3 | 8mer | 40-63 | 0.0264865216495055 | 1 | | | | | | | | | | | Position on chromosome: | 11:77325615-77325638 | | Conserved species: | panTro2 | | Binding area: | | (Transcript) | 5' | CAGGU_G____AUC_____A_________ | 3' | | | _____G_GCAG___ACUUG_GGUCAGGAG | | | | _____._.|||___||.||_.|||||||| | | | | _____U_UGUC___UGGAC_UCAGUCCUC | | | (miRNA) | 3' | ______G____C_______C_________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 95-112 | 0.00646185869614624 | 0 | | | | | | | | | | | Position on chromosome: | 11:77333572-77333589 | | Conserved species: | Not Conserved | | Binding area: | | (Transcript) | 5' | AGCCAGUAUA_____________________C | 3' | | | __________AUAU_GG__CUGGGGUCAGGA_ | | | | __________|.|._||__||||.|||||||_ | | | | __________UGUG_CC__GACCUCAGUCCU_ | | | (miRNA) | 3' | ______________U__UG____________C | 5' |
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| | | | | 10 | ENSG00000074201 (CLNS1A) | hsa-miR-7856-5p | 0.912200981874709 | | | | | | | | Gene details | | loading... | | | miRNA details | | loading... | |
pubMed links: miRNA | gene | both
UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 6mer | 1571-1596 | 0.002860562834567 | 0 | | | | | | | | | | | Position on chromosome: | 11:77327146-77327171 | | Conserved species: | Not Conserved | | Binding area: | | (Transcript) | 5' | AAA__AUUAA_G__AAA____U_______ | 3' | | | ___CC_____U_AG___UGUU_UUUAAAA | | | | ___||_____|_||___|||._.|||||| | | | | ___GG_____A_UC___ACAG_GAAUUUU | | | (miRNA) | 3' | __A__G_____G_________________ | 5' |
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| | | | | | | | | UTR3 | 9mer | 1281-1300 | 0.0335403637994398 | 1 | | | | | | | | | | | Position on chromosome: | 11:77326856-77326875 | | Conserved species: | panTro2 | | Binding area: | | (Transcript) | 5' | ACUUUUGAA___A____U____________ | 3' | | | _________AUC__UUA_GUGUCCUUAAAA | | | | _________|||__|.|_|||||||||||| | | | | _________UAG__AGU_CACAGGAAUUUU | | | (miRNA) | 3' | ________C___GG________________ | 5' |
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| | | | | | | | | UTR3 | 6mer | 627-650 | 0.00231636492614332 | 3 | | | | | | | | | | | Position on chromosome: | 11:77326202-77326225 | | Conserved species: | panTro2,rheMac2,loxAfr3 | | Binding area: | | (Transcript) | 5' | UAGAA_____AUU_G_______UU______ | 3' | | | _____AUUCC___U_AGU_UCC__UUAAAA | | | | _____||.||___|_|||_|||__|||||| | | | | _____UAGGG___A_UCA_AGG__AAUUUU | | | (miRNA) | 3' | ____C_________G___C___________ | 5' |
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| | | | | | | | | UTR3 | 6mer | 348-361 | 0.00429735110274907 | 3 | | | | | | | | | | | Position on chromosome: | 11:77325923-77325936 | | Conserved species: | panTro2,rheMac2,dasNov2 | | Binding area: | | (Transcript) | 5' | AGAAAAAAGAGCAGG______C________ | 3' | | | _______________UCAG_G_UUUUAAAA | | | | _______________||||_|_..|||||| | | | | _______________AGUC_C_GGAAUUUU | | | (miRNA) | 3' | ______________G____A_A________ | 5' |
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| | | | | | | | | UTR3 | 6mer | 142-157 | 0.0059492166660752 | 5 | | | | | | | | | | | Position on chromosome: | 11:77325717-77325732 | | Conserved species: | panTro2,rheMac2,bosTau4,loxAfr3,echTel1 | | Binding area: | | (Transcript) | 5' | GUUCUCUGUUCUA_____________________ | 3' | | | _____________GGUUCUUCA_____UUUAAAA | | | | _____________|.|.|.|||_____.|||||| | | | | _____________CUAGGGAGU_____GAAUUUU | | | (miRNA) | 3' | ______________________CACAG_______ | 5' |
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| | | | | 11 | ENSG00000074201 (CLNS1A) | hsa-miR-652-5p | 0.901997634578258 | | | | | | | | Gene details | | loading... | | | miRNA details | | loading... | |
pubMed links: miRNA | gene | both
UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 6mer | 793-819 | 0.00159931714268792 | 3 | | | | | | | | | | | Position on chromosome: | 11:77326368-77326394 | | Conserved species: | panTro2,rheMac2,bosTau4 | | Binding area: | | (Transcript) | 5' | U____A______CCACUGCUGC______U | 3' | | | _GCAC_CUCUCC__________AGGGUU_ | | | | _||||_||||||__________||||||_ | | | | _CGUG_GAGAGG__________UCCCAA_ | | | (miRNA) | 3' | C____G______A_______________C | 5' |
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| | | | | | | | | UTR3 | 8mer | 282-301 | 0.0258457596860549 | 3 | | | | | | | | | | | Position on chromosome: | 11:77325857-77325876 | | Conserved species: | panTro2,rheMac2,bosTau4 | | Binding area: | | (Transcript) | 5' | GAUUUCAUU__A_____AA___________ | 3' | | | _________UG__GCCU__UUUUAGGGUUG | | | | _________||__.||.__|..|||||||| | | | | _________AC__UGGG__AGGAUCCCAAC | | | (miRNA) | 3' | ________U__CG____AG___________ | 5' |
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| | | | | | | | | UTR3 | 8mer | 175-196 | 0.0195380634439359 | 1 | | | | | | | | | | | Position on chromosome: | 11:77325750-77325771 | | Conserved species: | panTro2 | | Binding area: | | (Transcript) | 5' | CAUCUA____U______AAAAG________A | 3' | | | ______AAUG___UCCU_____CUAGGGUU_ | | | | ______||||___.|||_____||||||||_ | | | | ______UUAC___GGGA_____GAUCCCAA_ | | | (miRNA) | 3' | _____C____CGU____GAG__________C | 5' |
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| | | | | 12 | ENSG00000074201 (CLNS1A) | hsa-miR-508-5p | 0.875370320866999 | | | | | | | | Gene details | | loading... | | | miRNA details | | loading... | |
pubMed links: miRNA | gene | both
UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 8mer | 2114-2137 | 0.0425650431577259 | 3 | | | | | | | | | | | Position on chromosome: | 11:77327689-77327712 | | Conserved species: | panTro2,rheMac2,oryCun2 | | Binding area: | | (Transcript) | 5' | GAACU_______UCUUCCA__________ | 3' | | | _____UGGUGCC_______CUCUGGAGUG | | | | _____||..|||_______|||||||||. | | | | _____ACUGCGG_______GAGACCUCAU | | | (miRNA) | 3' | ____C________________________ | 5' |
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| | | | | 13 | ENSG00000074201 (CLNS1A) | hsa-miR-4528 | 0.874244544653279 | | | | | | | | Gene details | | loading... | | | miRNA details | | loading... | |
pubMed links: miRNA | gene | both
UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 6mer | 2104-2127 | 0.00469878218130492 | 1 | | | | | | | | | | | Position on chromosome: | 11:77327679-77327702 | | Conserved species: | panTro2 | | Binding area: | | (Transcript) | 5' | CCUCU____CUCUGGA___AAGU______ | 3' | | | _____UCCA_______GUG____UAAUGA | | | | _____||||_______.|.____|||||| | | | | _____AGGU_______UAU____AUUACU | | | (miRNA) | 3' | ____C____CUAG______GUAU______ | 5' |
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| | | | | | | | | UTR3 | 6mer | 1564-1569 | 0.00444365432422332 | 3 | | | | | | | | | | | Position on chromosome: | 11:77327139-77327144 | | Conserved species: | panTro2,rheMac2,loxAfr3 | | Binding area: | | (Transcript) | 5' | AAUGAGAAAUGUUUUUUAAAAA______C | 3' | | | ______________________AUAAUG_ | | | | ______________________||||||_ | | | | ______________________UAUUAC_ | | | (miRNA) | 3' | _____________________A______U | 5' |
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| | | | | | | | | UTR3 | 8mer | 331-348 | 0.0332546022547324 | 3 | | | | | | | | | | | Position on chromosome: | 11:77325906-77325923 | | Conserved species: | panTro2,rheMac2,echTel1 | | Binding area: | | (Transcript) | 5' | AGGCUUUUAAA____AAAAUU________ | 3' | | | ___________AGAU______UAUAAUGA | | | | ___________||||______|||||||| | | | | ___________UCUA______AUAUUACU | | | (miRNA) | 3' | __________G____GUAUGU________ | 5' |
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| | | | | 14 | ENSG00000074201 (CLNS1A) | hsa-miR-548b-3p | 0.873407476142084 | | | | | | | | Gene details | | loading... | | | miRNA details | | loading... | |
pubMed links: miRNA | gene | both
UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 6mer | 2057-2079 | 0.00671477180785362 | 4 | | | | | | | | | | | Position on chromosome: | 11:77327632-77327654 | | Conserved species: | panTro2,rheMac2,bosTau4,loxAfr3 | | Binding area: | | (Transcript) | 5' | AAAACC____C___ACCAGUUCU______ | 3' | | | ______CAAC_UGA_________UUCUUG | | | | ______||||_|||_________|||||| | | | | ______GUUG_ACU_________AAGAAC | | | (miRNA) | 3' | _____C________CC_____________ | 5' |
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| | | | | | | | | UTR3 | 6mer | 1604-1621 | 0.00471223847612016 | 4 | | | | | | | | | | | Position on chromosome: | 11:77327179-77327196 | | Conserved species: | panTro2,rheMac2,oryCun2,bosTau4 | | Binding area: | | (Transcript) | 5' | UUUUCUAUAUU__UUU___U___CA________ | 3' | | | ___________AC____GC__CU____UUCUUG | | | | ___________||____||__||____|||||| | | | | ___________UG____CG__GA____AAGAAC | | | (miRNA) | 3' | _____________UUUU__UU__CUCC______ | 5' |
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| | | | | | | | | UTR3 | 8mer | 151-175 | 0.0308459419517818 | 2 | | | | | | | | | | | Position on chromosome: | 11:77325726-77325750 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | GGU___U___UCU___UUCU________C | 3' | | | ___UAA_GGU___CUG____AGGUUCUU_ | | | | ___.||_.|.___|||____||||||||_ | | | | ___GUU_UCG___GAC____UCCAAGAA_ | | | (miRNA) | 3' | __U___U___UU________________C | 5' |
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| | | | | 15 | ENSG00000074201 (CLNS1A) | hsa-miR-4468 | 0.87031425237071 | | | | | | | | Gene details | | loading... | | | miRNA details | | loading... | |
pubMed links: miRNA | gene | both
UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 8mer | 2157-2171 | 0.0386705509445537 | 6 | | | | | | | | | | | Position on chromosome: | 11:77327732;77330651-77327740;77330656 | | Conserved species: | panTro2,rheMac2,rn4,mm9,bosTau4,canFam2 | | Binding area: | | (Transcript) | 5' | UGAUUUAUGCAAG____AGA________C | 3' | | | _____________UUUA___UUCUGCUC_ | | | | _____________.|.|___||||||||_ | | | | _____________GAGU___AAGACGAG_ | | | (miRNA) | 3' | ____________A____AGG________A | 5' |
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| | | | | | | | | UTR3 | 6mer | 582-594 | 0.0031498603929828 | 2 | | | | | | | | | | | Position on chromosome: | 11:77326157-77326169 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | UGUGACUUUCCAUGAA___AAA________ | 3' | | | ________________CAU____UUGCUCU | | | | ________________|||____.|||||| | | | | ________________GUA____GACGAGA | | | (miRNA) | 3' | _______________A___GGAA_______ | 5' |
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| | | | | 16 | ENSG00000074201 (CLNS1A) | hsa-miR-3133 | 0.868234090822372 | | | | | | | | Gene details | | loading... | | | miRNA details | | loading... | |
pubMed links: miRNA | gene | both
UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 8mer | 2061-2068 | 0.0189007465724754 | 4 | | | | | | | | | | | Position on chromosome: | 11:77327636-77327643 | | Conserved species: | panTro2,oryCun2,bosTau4,canFam2 | | Binding area: | | (Transcript) | 5' | UCCAAAACCCAACCUGAACC________C | 3' | | | ____________________AGUUCUUU_ | | | | ____________________||||||||_ | | | | ____________________UCAAGAAA_ | | | (miRNA) | 3' | ___________________C________U | 5' |
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| | | | | | | | | UTR3 | 9mer | 1007-1016 | 0.0184028494191619 | 2 | | | | | | | | | | | Position on chromosome: | 11:77326582-77326591 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | CUGUACUAGCCACUGUCCU__________ | 3' | | | ___________________GAGUUCUUUA | | | | ___________________|||||||||| | | | | ___________________CUCAAGAAAU | | | (miRNA) | 3' | __________________U__________ | 5' |
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| | | | | | | | | UTR3 | 6mer | 264-287 | 0.00421762753092326 | 2 | | | | | | | | | | | Position on chromosome: | 11:77325839-77325862 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | UUUUA_____GCU___AUUGUU_______ | 3' | | | _____GGGUU___GGA______UUCUUUG | | | | _____|||||___.||______||||||. | | | | _____CCCAA___UCU______AAGAAAU | | | (miRNA) | 3' | ____A_____AAU___C____________ | 5' |
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| | | | | 17 | ENSG00000074201 (CLNS1A) | hsa-miR-6124 | 0.866646093530181 | | | | | | | | Gene details | | loading... | | | miRNA details | | loading... | |
pubMed links: miRNA | gene | both
UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 8mer | 2086-2100 | 0.0314076034181829 | 2 | | | | | | | | | | | Position on chromosome: | 11:77327661-77327675 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | AAGUUAAUGAAAG__UU___________A | 3' | | | _____________UC__UUUCCUUUUCC_ | | | | _____________.|__.||||||||||_ | | | | _____________GG__GAAGGAAAAGG_ | | | (miRNA) | 3' | ____________A__GG___________G | 5' |
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| | | | | | | | | UTR3 | 6mer | 1167-1183 | 0.00279956371806578 | 2 | | | | | | | | | | | Position on chromosome: | 11:77326742-77326758 | | Conserved species: | panTro2,bosTau4 | | Binding area: | | (Transcript) | 5' | UUCAUUUCAGCA__G__A___GG_______ | 3' | | | ____________CU_UC_CUU___UUUCCC | | | | ____________||_.|_|||___|||||| | | | | ____________GA_GG_GAA___AAAGGG | | | (miRNA) | 3' | ___________G__G__G___GGA______ | 5' |
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| | | | | | | | | UTR3 | 6mer | 1128-1134 | 0.00215775270520509 | 5 | | | | | | | | | | | Position on chromosome: | 11:77326703-77326709 | | Conserved species: | panTro2,rheMac2,canFam2,dasNov2,echTel1 | | Binding area: | | (Transcript) | 5' | AGGUAGACUGAAAAAAAACGAA________ | 3' | | | ______________________UUUUCCU_ | | | | ______________________..|||||_ | | | | ______________________GGAAGGA_ | | | (miRNA) | 3' | _____________________G_______A | 5' |
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| | | | | | | | | UTR3 | 6mer | 218-223 | 0.00493058909876175 | 2 | | | | | | | | | | | Position on chromosome: | 11:77325793-77325798 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | GACACUUUAAAGGUACAUAGACA_______ | 3' | | | _______________________UUUCCC_ | | | | _______________________.|.|||_ | | | | _______________________GAGGGG_ | | | (miRNA) | 3' | ______________________G______G | 5' |
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| | | | | 18 | ENSG00000074201 (CLNS1A) | hsa-miR-5585-5p | 0.861809762987886 | | | | | | | | Gene details | | loading... | | | miRNA details | | loading... | |
pubMed links: miRNA | gene | both
UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 8mer | 1680-1707 | 0.0406217972197377 | 4 | | | | | | | | | | | Position on chromosome: | 11:77327255-77327282 | | Conserved species: | panTro2,rheMac2,oryCun2,canFam2 | | Binding area: | | (Transcript) | 5' | G___G__AU_A___CCUCAAA________ | 3' | | | _UCU_GG__G_AGU_______GUACUUCA | | | | _|||_|.__|_||._______|||||||| | | | | _AGA_CU__C_UCG_______CAUGAAGU | | | (miRNA) | 3' | G___G_____A___AC_____________ | 5' |
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| | | | | 19 | ENSG00000074201 (CLNS1A) | hsa-miR-3915 | 0.857319811228154 | | | | | | | | Gene details | | loading... | | | miRNA details | | loading... | |
pubMed links: miRNA | gene | both
UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 7mer | 1689-1713 | 0.0135512551585767 | 2 | | | | | | | | | | | Position on chromosome: | 11:77327264-77327288 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | AACA______U__GGGAUGAAG_______ | 3' | | | ____AGUGAG_CU_________UCCUCAA | | | | ____|.|.||_|._________||||||| | | | | ____UUAUUC_GG_________AGGAGUU | | | (miRNA) | 3' | __________U__UAGAAA__________ | 5' |
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| | | | | | | | | UTR3 | 8mer | 457-484 | 0.0264625806610083 | 3 | | | | | | | | | | | Position on chromosome: | 11:77326032-77326059 | | Conserved species: | panTro2,rheMac2,canFam2 | | Binding area: | | (Transcript) | 5' | _____C_______CUGGGCUUA________U | 3' | | | _UGGG_ACC_UCU_________UUUCCUCA_ | | | | _|..|_|||_|||_________||||||||_ | | | | _AUUC_UGG_AGA_________AAAGGAGU_ | | | (miRNA) | 3' | U________U____________________U | 5' |
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| | | | | 20 | ENSG00000074201 (CLNS1A) | hsa-miR-374a-5p | 0.854432264408304 | | | | | | | | Gene details | | loading... | | | miRNA details | | loading... | |
pubMed links: miRNA | gene | both
UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 9mer | 1341-1362 | 0.00995861661436678 | 2 | | | | | | | | | | | Position on chromosome: | 11:77326916-77326937 | | Conserved species: | panTro2,mm9 | | Binding area: | | (Transcript) | 5' | UAGUUUU___AG__ACCU_____________ | 3' | | | _______CAU__AU____GG__GUAUUAUAA | | | | _______||.__||____||__||||||||| | | | | _______GUG__UA____CC__CAUAAUAUU | | | (miRNA) | 3' | __________AA__GU____AA_________ | 5' |
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| | | | | | | | | UTR3 | 9mer | 994-1010 | 0.020230592198115 | 2 | | | | | | | | | | | Position on chromosome: | 11:77326569-77326585 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | UGUCCUGAGUUC____________________ | 3' | | | ____________UUUAUUA___UGUAUUAUAA | | | | ____________.||||.|___|||||||||| | | | | ____________GAAUAGU___ACAUAAUAUU | | | (miRNA) | 3' | ___________U_______CCA__________ | 5' |
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| | | | | | | | | UTR3 | 6mer | 612-633 | 0.00367612753984049 | 1 | | | | | | | | | | | Position on chromosome: | 11:77326187-77326208 | | Conserved species: | panTro2 | | Binding area: | | (Transcript) | 5' | AGUUCCU____AA___AACAAAU______ | 3' | | | _______UUUA__AGG_______UUAUAA | | | | _______.|||__|||_______|||||| | | | | _______GAAU__UCC_______AAUAUU | | | (miRNA) | 3' | ______U____AG___AACAU________ | 5' |
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| | | | | | | | | UTR3 | 6mer | 334-362 | 0.00576589371864104 | 3 | | | | | | | | | | | Position on chromosome: | 11:77325909-77325937 | | Conserved species: | panTro2,rheMac2,echTel1 | | Binding area: | | (Transcript) | 5' | _______C__U__AAAGAUAAAAU______ | 3' | | | _GUCAGG_UU_UA___________UUAUAA | | | | _.|||||_||_||___________|||||| | | | | _UAGUCC_AA_AU___________AAUAUU | | | (miRNA) | 3' | A_________C___________________ | 5' |
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| | | | | 21 | ENSG00000074201 (CLNS1A) | hsa-miR-6081 | 0.848257771008067 | | | | | | | | Gene details | | loading... | | | miRNA details | | loading... | |
pubMed links: miRNA | gene | both
UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 8mer | 2155-2177 | 0.0356300778869462 | 2 | | | | | | | | | | | Position on chromosome: | 11:77327730;77330651-77327740;77330662 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | GAUUUA___AAGUUUAAGAUU________ | 3' | | | ______UGC____________CUGCUCCU | | | | ______.||____________|||||||| | | | | ______GCG____________GACGAGGA | | | (miRNA) | 3' | _____C___GAACCGGCCGU_________ | 5' |
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| | | | | | | | | UTR3 | 6mer | 1803-1824 | 0.00320365944970658 | 2 | | | | | | | | | | | Position on chromosome: | 11:77327378-77327399 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | GUAGACU___GG____AAA_A_AGA_______ | 3' | | | _______GCG____GG___G_G____GCUCCU | | | | _______|||____||___|_|____|||||| | | | | _______CGC____CC___C_C____CGAGGA | | | (miRNA) | 3' | ______C___GGAA__GG____GUGA______ | 5' |
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| | | | | 22 | ENSG00000074201 (CLNS1A) | hsa-miR-4299 | 0.84398489704698 | | | | | | | | Gene details | | loading... | | | miRNA details | | loading... | |
pubMed links: miRNA | gene | both
UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 9mer | 2021-2035 | 0.033112417621837 | 8 | | | | | | | | | | | Position on chromosome: | 11:77327596-77327610 | | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3 | | Binding area: | | (Transcript) | 5' | CUAUACUGAGACAA__AGU__________ | 3' | | | ______________CA___UGUCACCAGC | | | | ______________||___|||||||||| | | | | ______________GU___ACAGUGGUCG | | | (miRNA) | 3' | _____________A_______________ | 5' |
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| | | | | | | | | UTR3 | 6mer | 832-849 | 0.00178834615320373 | 2 | | | | | | | | | | | Position on chromosome: | 11:77326407-77326424 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | AACAUCAUACA_____ACCACC_______ | 3' | | | ___________GCCUU______UACCAGC | | | | ___________||||.______.|||||| | | | | ___________CGGAG______GUGGUCG | | | (miRNA) | 3' | ________________AGUACA_______ | 5' |
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| | | | | | | | | UTR3 | 6mer | 28-47 | 0.00339657228495845 | 2 | | | | | | | | | | | Position on chromosome: | 11:77325603-77325622 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | UCACUUGAG___AGGAGUU__AG______ | 3' | | | _________GUC_______UG__ACCAGC | | | | _________|.|_______||__|||||| | | | | _________CGG_______AC__UGGUCG | | | (miRNA) | 3' | ____________AGAGU____AG______ | 5' |
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| | | | | 23 | ENSG00000074201 (CLNS1A) | hsa-miR-3974 | 0.840833237905455 | | | | | | | | Gene details | | loading... | | | miRNA details | | loading... | |
pubMed links: miRNA | gene | both
UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 9mer | 1998-2022 | 0.0379093159087473 | 5 | | | | | | | | | | | Position on chromosome: | 11:77327573-77327597 | | Conserved species: | panTro2,rheMac2,oryCun2,bosTau4,canFam2 | | Binding area: | | (Transcript) | 5' | ACCA___GA__AUAG___AU_________ | 3' | | | ____GCA__AG____AUA__AUGACCUUU | | | | ____|||__|.____|.|__||||||||| | | | | ____CGU__UU____UGU__UACUGGAAA | | | (miRNA) | 3' | _______AA__GGAA______________ | 5' |
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| | | | | 24 | ENSG00000074201 (CLNS1A) | hsa-miR-138-5p | 0.83775679503313 |  | | | | | | | Gene details | | loading... | | | miRNA details | | loading... | |
pubMed links: miRNA | gene | both
UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 7mer | 2021-2044 | 0.0325379821335962 | 9 | | | | | | | | | | | Position on chromosome: | 11:77327596-77327619 | | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,monDom5 | | Binding area: | | (Transcript) | 5' | UAUA____GACA____GUUGU_______A | 3' | | | ____CUGA____ACAA_____CACCAGC_ | | | | ____||||____||||_____|||||||_ | | | | ____GACU____UGUU_____GUGGUCG_ | | | (miRNA) | 3' | ___G____AAG_________________A | 5' |
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| | | | | | | | | UTR3 | 6mer | 832-851 | 0.00134703686424885 | 2 | | | | | | | | | | | Position on chromosome: | 11:77326407-77326426 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | ACAUCAUA_A____UAC____C________A | 3' | | | ________C_GCCU____CAC__UACCAGC_ | | | | ________|_||||____|||__.||||||_ | | | | ________G_CGGA____GUG__GUGGUCG_ | | | (miRNA) | 3' | _________C____CUAA___UU_______A | 5' |
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| | | | | | | | | UTR3 | 6mer | 28-48 | 0.00365149931829324 | 2 | | | | | | | | | | | Position on chromosome: | 11:77325603-77325623 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | CACUUGA____A__AG_UU__G______C | 3' | | | _______GGUC_GG__U__GA_ACCAGC_ | | | | _______||.|_|.__.__.|_||||||_ | | | | _______CCGG_CU__G__UU_UGGUCG_ | | | (miRNA) | 3' | ______G____A__AA_UG__G______A | 5' |
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| | | | | 25 | ENSG00000074201 (CLNS1A) | hsa-miR-6818-3p | 0.837512952037515 | | | | | | | | Gene details | | loading... | | | miRNA details | | loading... | |
pubMed links: miRNA | gene | both
UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 6mer | 2051-2075 | 0.0065075307768415 | 4 | | | | | | | | | | | Position on chromosome: | 11:77327626-77327650 | | Conserved species: | panTro2,rheMac2,bosTau4,canFam2 | | Binding area: | | (Transcript) | 5' | CAAC___AACC__UUCUUUCUU_______ | 3' | | | ____CUG____AG_________GAGACAG | | | | ____|||____||_________||||||. | | | | ____GAC____UC_________CUCUGUU | | | (miRNA) | 3' | _______ACAC__CUUGUU__________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 2036-2060 | 0.0110502413272426 | 4 | | | | | | | | | | | Position on chromosome: | 11:77327611-77327635 | | Conserved species: | panTro2,rheMac2,bosTau4,canFam2 | | Binding area: | | (Transcript) | 5' | CUUU_______________ACUAUACU_______ | 3' | | | ____CU___UGAG__ACAG________GAGACAA | | | | ____||___||||__|||.________||||||| | | | | ____GA___ACUC__UGUU________CUCUGUU | | | (miRNA) | 3' | ______CAC____CU___________________ | 5' |
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| | | | | | | | | UTR3 | 6mer | 319-333 | 0.00452594551228556 | 2 | | | | | | | | | | | Position on chromosome: | 11:77325894-77325908 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | GAUAAAAUUUAUAA___UC___C________ | 3' | | | ______________UGA__AGC___AGACAA | | | | ______________|||__|.|___|||||| | | | | ______________ACU__UUG___UCUGUU | | | (miRNA) | 3' | _____________C___CC___UUC______ | 5' |
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| | | | | | | | | UTR3 | 7mer | 243-266 | 0.0154234971743838 | 2 | | | | | | | | | | | Position on chromosome: | 11:77325818-77325841 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | UUCU_______UUCCU__UGU_______C | 3' | | | ____UUGUGUG_____GA___AGAGACA_ | | | | ____.||||||_____||___|||||||_ | | | | ____GACACAC_____CU___UCUCUGU_ | | | (miRNA) | 3' | ___________UC_____UGU_______U | 5' |
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| | | | | 26 | ENSG00000074201 (CLNS1A) | hsa-miR-1206 | 0.83513504857304 | | | | | | | | Gene details | | loading... | | | miRNA details | | loading... | |
pubMed links: miRNA | gene | both
UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 7mer | 1505-1523 | 0.011596306127925 | 3 | | | | | | | | | | | Position on chromosome: | 11:77327080-77327098 | | Conserved species: | panTro2,bosTau4,canFam2 | | Binding area: | | (Transcript) | 5' | UUUUUGUUUA____UUGAGA__G_______ | 3' | | | __________CUUG_______A_AUGAACA | | | | __________|||._______|_||||||| | | | | __________GAAU_______U_UACUUGU | | | (miRNA) | 3' | _________C____UUGUAGA_G_______ | 5' |
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| | | | | | | | | UTR3 | 8mer | 593-607 | 0.0198351367859327 | 2 | | | | | | | | | | | Position on chromosome: | 11:77326168-77326182 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | AAAUUUAUAAUUGU_______C________ | 3' | | | ______________GAC_UUU_CAUGAACA | | | | ______________.||_|.|_|||||||| | | | | ______________UUG_AGA_GUACUUGU | | | (miRNA) | 3' | _____________U___U___U________ | 5' |
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| | | | | | | | | UTR3 | 9mer | 238-254 | 0.0332216386295118 | 0 | | | | | | | | | | | Position on chromosome: | 11:77333715;77336008-77333718;77336020 | | Conserved species: | Not Conserved | | Binding area: | | (Transcript) | 5' | GAAGAAUAUGAU__GG_________________ | 3' | | | ____________GU__AAGC____ACAUGAACA | | | | ____________|.__||.|____||||||||| | | | | ____________CG__UUUG____UGUACUUGU | | | (miRNA) | 3' | ______________AA____UAGA_________ | 5' |
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| | | | | 27 | ENSG00000074201 (CLNS1A) | hsa-miR-6131 | 0.833389534246606 | | | | | | | | Gene details | | loading... | | | miRNA details | | loading... | |
pubMed links: miRNA | gene | both
UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 6mer | 2021-2046 | 0.0104856372004254 | 9 | | | | | | | | | | | Position on chromosome: | 11:77327596-77327621 | | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,monDom5 | | Binding area: | | (Transcript) | 5' | UA____GAGA__ACAAG___UC______A | 3' | | | __UACU____CA_____UUG__ACCAGC_ | | | | __.|||____||_____.||__||||||_ | | | | __GUGA____GU_____GAC__UGGUCG_ | | | (miRNA) | 3' | ______GG____A_______________G | 5' |
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| | | | | | | | | UTR3 | 6mer | 1741-1757 | 0.00486907596728705 | 3 | | | | | | | | | | | Position on chromosome: | 11:77327316-77327332 | | Conserved species: | panTro2,rheMac2,bosTau4 | | Binding area: | | (Transcript) | 5' | UCUUAGGUUGUA____UUAAUUU______ | 3' | | | ____________UCCU_______CCAGCC | | | | ____________|||._______|||||| | | | | ____________AGGG_______GGUCGG | | | (miRNA) | 3' | ___________G____UAGACU_______ | 5' |
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| | | | | | | | | UTR3 | 6mer | 832-848 | 0.00153423090582025 | 2 | | | | | | | | | | | Position on chromosome: | 11:77326407-77326423 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | ACAUCAUACAG_____A___C_________A | 3' | | | ___________C_CUU_CCA_CU_ACCAGC_ | | | | ___________|_||._|||_||_||||||_ | | | | ___________G_GAG_GGU_GA_UGGUCG_ | | | (miRNA) | 3' | ____________U_______A__C______G | 5' |
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| | | | | | | | | UTR3 | 6mer | 113-137 | 0.00268715743722634 | 1 | | | | | | | | | | | Position on chromosome: | 11:77325688-77325712 | | Conserved species: | panTro2 | | Binding area: | | (Transcript) | 5' | AAUG_____AUUAAGAUA___UC______ | 3' | | | ____UAUUC_________UGG__CCAGCC | | | | ____.|.||_________||.__|||||| | | | | ____GUGAG_________ACU__GGUCGG | | | (miRNA) | 3' | _________GGUAG_______________ | 5' |
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| | | | | | | | | UTR3 | 8mer | 27-55 | 0.0174408630778206 | 2 | | | | | | | | | | | Position on chromosome: | 11:77325602-77325630 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | _____GAGG___GGAG__UGA________ | 3' | | | CACUU____UCA____UU___GACCAGCC | | | | ||||.____.||____.|___|||||||| | | | | GUGAG____GGU____GA___CUGGUCGG | | | (miRNA) | 3' | ____________A________________ | 5' |
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| | | | | 28 | ENSG00000074201 (CLNS1A) | hsa-miR-3064-5p | 0.833087285033414 | | | | | | | | Gene details | | loading... | | | miRNA details | | loading... | |
pubMed links: miRNA | gene | both
UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 8mer | 322-338 | 0.0336794691086986 | 2 | | | | | | | | | | | Position on chromosome: | 11:77325897-77325913 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | AAAGAUAAAAUU____AUGAU_________ | 3' | | | ____________UAUA______CAGCCAGA | | | | ____________.|.|______|||||||| | | | | ____________GUGU______GUCGGUCU | | | (miRNA) | 3' | ___________C____GGUGUU________ | 5' |
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| | | | | | | | | UTR3 | 8mer | 649-669 | 0.0032270268806188 | 0 | | | | | | | | | | | Position on chromosome: | 11:77348695-77348715 | | Conserved species: | Not Conserved | | Binding area: | | (Transcript) | 5' | GCGGAGGG__UC_UG_G____________ | 3' | | | ________GC__C__C_GCAGCAGCCAGA | | | | ________||__|__|_.||.|||||||| | | | | ________CG__G__G_UGUUGUCGGUCU | | | (miRNA) | 3' | _______A__U__UG______________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 117-134 | 0.0171190086947575 | 0 | | | | | | | | | | | Position on chromosome: | 11:77333594-77333611 | | Conserved species: | Not Conserved | | Binding area: | | (Transcript) | 5' | AAUGCUUUCU__GU__GUG_________U | 3' | | | __________CA__CU___AGCAGCCAG_ | | | | __________||__|.___|.|||||||_ | | | | __________GU__GG___UUGUCGGUC_ | | | (miRNA) | 3' | _________C__GU__UG__________U | 5' |
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| | | | | 29 | ENSG00000074201 (CLNS1A) | hsa-miR-1197 | 0.830444829695354 | | | | | | | | Gene details | | loading... | | | miRNA details | | loading... | |
pubMed links: miRNA | gene | both
UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 8mer | 1286-1312 | 0.0340971078948357 | 1 | | | | | | | | | | | Position on chromosome: | 11:77326861-77326887 | | Conserved species: | panTro2 | | Binding area: | | (Transcript) | 5' | U______UUUGAAAUCAUU_________U | 3' | | | _UGGACU____________AUGUGUCCU_ | | | | _|.|||.____________|||||||||_ | | | | _AUCUGG____________UACACAGGA_ | | | (miRNA) | 3' | C___________________________U | 5' |
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| | | | | | | | | UTR3 | 6mer | 1016-1041 | 0.00257566161746779 | 4 | | | | | | | | | | | Position on chromosome: | 11:77326591-77326616 | | Conserved species: | panTro2,rheMac2,bosTau4,dasNov2 | | Binding area: | | (Transcript) | 5' | CUG_____UC__UACUAGCCAC_______ | 3' | | | ___AGACC__UG__________UGUCCUG | | | | ___|||||__||__________||||||. | | | | ___UCUGG__AC__________ACAGGAU | | | (miRNA) | 3' | __A_____U____________________ | 5' |
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| | | | | 30 | ENSG00000074201 (CLNS1A) | hsa-miR-340-5p | 0.826691237070676 | | | | | | | | Gene details | | loading... | | | miRNA details | | loading... | |
pubMed links: miRNA | gene | both
UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 6mer | 1341-1369 | 0.00263605613726513 | 2 | | | | | | | | | | | Position on chromosome: | 11:77326916-77326944 | | Conserved species: | panTro2,mm9 | | Binding area: | | (Transcript) | 5' | ______U____AGAUACCUGG__A______ | 3' | | | _UAGUU_UCAU__________GU_UUAUAA | | | | _.|||._||||__________|._|||||| | | | | _GUCAG_AGUA__________CG_AAUAUU | | | (miRNA) | 3' | A__________A___________A______ | 5' |
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| | | | | | | | | UTR3 | 6mer | 1315-1341 | 0.00184833184811866 | 4 | | | | | | | | | | | Position on chromosome: | 11:77326890-77326916 | | Conserved species: | panTro2,rheMac2,bosTau4,canFam2 | | Binding area: | | (Transcript) | 5' | A__G__G__UUGUAAUUAC__A______C | 3' | | | _AG_CU_AU__________UG_UUUAUA_ | | | | _||_||_||__________||_||||||_ | | | | _UC_GA_UA__________AC_AAAUAU_ | | | (miRNA) | 3' | G__A__G______________G______U | 5' |
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| | | | | | | | | UTR3 | 6mer | 994-1015 | 0.00253999298411039 | 2 | | | | | | | | | | | Position on chromosome: | 11:77326569-77326590 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | UGUCCUG___UC_____UA___A______ | 3' | | | _______AGU__UUUAU__UGU_UUAUAA | | | | _______|||__.|.||__||._|||||| | | | | _______UCA__GAGUA__ACG_AAUAUU | | | (miRNA) | 3' | ______G_______________A______ | 5' |
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| | | | | | | | | UTR3 | 7mer | 949-969 | 0.0042231674816811 | 4 | | | | | | | | | | | Position on chromosome: | 11:77326524-77326544 | | Conserved species: | panTro2,rheMac2,rn4,mm9 | | Binding area: | | (Transcript) | 5' | AUGAGAUA__C______CCCA________ | 3' | | | ________CG_UUUUAU____CUUUAUAG | | | | ________|._|.|.||____|||||||. | | | | ________GU_AGAGUA____GAAAUAUU | | | (miRNA) | 3' | _______A__C______AC__________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 612-627 | 0.00889844901114217 | 1 | | | | | | | | | | | Position on chromosome: | 11:77326187-77326202 | | Conserved species: | panTro2 | | Binding area: | | (Transcript) | 5' | AGUUCCUUUUAAA__GAA__AA_________ | 3' | | | _____________AG___CA____UUUAUAA | | | | _____________||___||____||||||| | | | | _____________UC___GU____AAAUAUU | | | (miRNA) | 3' | ____________G__AGA__AACG_______ | 5' |
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| | | | | | | | | UTR3 | 7mer | 334-362 | 0.0160948566558906 | 3 | | | | | | | | | | | Position on chromosome: | 11:77325909-77325937 | | Conserved species: | panTro2,rheMac2,echTel1 | | Binding area: | | (Transcript) | 5' | ______G___UUAAAAGAUAAAA_______ | 3' | | | _GUCAG_CUU_____________UUUAUAA | | | | _.||||_||._____________||||||| | | | | _UAGUC_GAG_____________AAAUAUU | | | (miRNA) | 3' | U_____A___UAACG_______________ | 5' |
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