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| | | Ensembl Gene Id | miRNA name | miTG score | Also Predicted | | | | | | | | 1 | ENSG00000013297 (CLDN11) | hsa-miR-32-5p | 0.998512097551479 |   | |  | | | | Gene details  | | loading... | | | miRNA details | | loading... | |
pubMed links: miRNA | gene | both
UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 6mer | 798-821 | 0.00263254055473045 | 1 | | | | | | | | | | | Position on chromosome: | 3:170151343-170151366 | | Conserved species: | panTro2 | | Binding area: | | (Transcript) | 5' | GGACA__G___GG__GAG__GAGG______ | 3' | | | _____UG_GAU__GG____G____GCAAUA | | | | _____||_.|.__.|____|____|||||| | | | | _____AC_UUG__UC____C____CGUUAU | | | (miRNA) | 3' | _______G___AA__AUUA_A_________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 1001-1014 | 0.0204573000886718 | 5 | | | | | | | | | | | Position on chromosome: | 3:170151546-170151559 | | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2 | | Binding area: | | (Transcript) | 5' | GAAAUGAACCACAUA_____UA____________ | 3' | | | _______________GACUU_______UGCAAUA | | | | _______________.||||_______||||||| | | | | _______________UUGAA_______ACGUUAU | | | (miRNA) | 3' | ______________G_____UCAUUAC_______ | 5' |
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| | | | | | | | | UTR3 | 9mer | 1298-1320 | 0.0939970544675934 | 8 | | | | | | | | | | | Position on chromosome: | 3:170151843-170151865 | | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,dasNov2,loxAfr3 | | Binding area: | | (Transcript) | 5' | UUUAUU___GA_____AAUC_________ | 3' | | | ______CUU__AGUGA____UGUGCAAUA | | | | ______|||__|||.|____||||||||| | | | | ______GAA__UCAUU____ACACGUUAU | | | (miRNA) | 3' | _____U_______________________ | 5' |
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| | | | | 2 | ENSG00000013297 (CLDN11) | hsa-miR-92a-3p | 0.986973400043672 | | | | | | | | Gene details | | loading... | | | miRNA details | | loading... | |
pubMed links: miRNA | gene | both
UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 7mer | 994-1014 | 0.0219333927490035 | 5 | | | | | | | | | | | Position on chromosome: | 3:170151539-170151559 | | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2 | | Binding area: | | (Transcript) | 5' | GAAAUGAA__ACAUA___UUUA_______ | 3' | | | ________CC_____GAC____UGCAAUA | | | | ________||_____|||____||||||| | | | | ________GG_____CUG____ACGUUAU | | | (miRNA) | 3' | _______C__CC______UUC________ | 5' |
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| | | | | | | | | UTR3 | 8mer | 1304-1320 | 0.0595032743032662 | 8 | | | | | | | | | | | Position on chromosome: | 3:170151849-170151865 | | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,dasNov2,loxAfr3 | | Binding area: | | (Transcript) | 5' | UUUAUUCUUGAA_UG__AUCU________ | 3' | | | ____________G__AA____GUGCAAUA | | | | ____________|__||____|||||||| | | | | ____________C__UU____CACGUUAU | | | (miRNA) | 3' | ___________C_UG______________ | 5' |
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| | | | | 3 | ENSG00000013297 (CLDN11) | hsa-miR-3662 | 0.985571127860568 |  | | | | | | | Gene details | | loading... | | | miRNA details | | loading... | |
pubMed links: miRNA | gene | both
UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 6mer | 122-139 | 0.00711773644833504 | 6 | | | | | | | | | | | Position on chromosome: | 3:170150667-170150684 | | Conserved species: | panTro2,rheMac2,rn4,mm9,dasNov2,loxAfr3 | | Binding area: | | (Transcript) | 5' | UCUAGAAAAG____CU___UGG____________G | 3' | | | __________CAUC__GUC_________CAUUUU_ | | | | __________||||__|||_________||||||_ | | | | __________GUAG__CAG_________GUAAAA_ | | | (miRNA) | 3' | ______________U____UGAUGAGUA______G | 5' |
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| | | | | | | | | UTR3 | 6mer | 199-221 | 0.0042940820374918 | 2 | | | | | | | | | | | Position on chromosome: | 3:170150744-170150766 | | Conserved species: | panTro2,dasNov2 | | Binding area: | | (Transcript) | 5' | UCUAG______A__A___C__GA______U | 3' | | | _____C_UCAG_UA_UGC_CA__CAUUUU_ | | | | _____|_||||_.|_|.|_||__||||||_ | | | | _____G_AGUC_GU_AUG_GU__GUAAAA_ | | | (miRNA) | 3' | ______U____A__G___A__A_______G | 5' |
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| | | | | | | | | UTR3 | 8mer | 916-941 | 0.0352474947620665 | 6 | | | | | | | | | | | Position on chromosome: | 3:170151461-170151486 | | Conserved species: | panTro2,mm9,oryCun2,canFam2,dasNov2,loxAfr3 | | Binding area: | | (Transcript) | 5' | UA___ACUUUU___AG___G________U | 3' | | | __CAU______UCA__AUU_AUCAUUUU_ | | | | __|||______|||__|.|_||||||||_ | | | | __GUA______AGU__UGA_UAGUAAAA_ | | | (miRNA) | 3' | _____GUC______GA___G________G | 5' |
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| | | | | | | | | UTR3 | 6mer | 1043-1065 | 0.0054254308040628 | 4 | | | | | | | | | | | Position on chromosome: | 3:170151588-170151610 | | Conserved species: | panTro2,rheMac2,dasNov2,loxAfr3 | | Binding area: | | (Transcript) | 5' | CUCUA____AUG___CACAAAA______U | 3' | | | _____ACUG___UUC_______CAUUUU_ | | | | _____|||.___.||_______||||||_ | | | | _____UGAU___GAG_______GUAAAA_ | | | (miRNA) | 3' | ____G__________UA___________G | 5' |
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| | | | | | | | | UTR3 | 7mer | 1087-1108 | 0.0128044757410155 | 2 | | | | | | | | | | | Position on chromosome: | 3:170151632-170151653 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | UAUGAUG_____U___A____A_______ | 3' | | | _______UAGUU_UUA_UCGU_CAUUUUC | | | | _______.|||._.||_||.|_||||||| | | | | _______GUCAG_GAU_AGUA_GUAAAAG | | | (miRNA) | 3' | ______A_____U___G____________ | 5' |
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| | | | | | | | | UTR3 | 6mer | 1114-1132 | 0.00542867885783178 | 4 | | | | | | | | | | | Position on chromosome: | 3:170151659-170151677 | | Conserved species: | panTro2,rheMac2,oryCun2,loxAfr3 | | Binding area: | | (Transcript) | 5' | UUUCAUAUG_U___A______A__________U | 3' | | | _________C_UCA___ACUA__CA_CAUUUU_ | | | | _________|_|||___||||__||_||||||_ | | | | _________G_AGU___UGAU__GU_GUAAAA_ | | | (miRNA) | 3' | __________U___CAG____GA__A______G | 5' |
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| | | | | | | | | UTR3 | 6mer | 1278-1294 | 0.00942456138598344 | 6 | | | | | | | | | | | Position on chromosome: | 3:170151823-170151839 | | Conserved species: | panTro2,rheMac2,bosTau4,canFam2,dasNov2,loxAfr3 | | Binding area: | | (Transcript) | 5' | AACUCUCCAAA_____AUGGUG______A | 3' | | | ___________UACUG______CAUUUU_ | | | | ___________.|||.______||||||_ | | | | ___________GUGAU______GUAAAA_ | | | (miRNA) | 3' | __________A_____GAGUA_______G | 5' |
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| | | | | 4 | ENSG00000013297 (CLDN11) | hsa-miR-92b-3p | 0.985323303554332 | | | | | | | | Gene details | | loading... | | | miRNA details | | loading... | |
pubMed links: miRNA | gene | both
UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 7mer | 994-1014 | 0.0213085538738061 | 5 | | | | | | | | | | | Position on chromosome: | 3:170151539-170151559 | | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2 | | Binding area: | | (Transcript) | 5' | GAAAUGAA__ACAUA___UUUA_______ | 3' | | | ________CC_____GAC____UGCAAUA | | | | ________||_____|||____||||||| | | | | ________GG_____CUG____ACGUUAU | | | (miRNA) | 3' | _______C__CC______CUC________ | 5' |
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| | | | | | | | | UTR3 | 8mer | 1299-1320 | 0.0581514625187764 | 8 | | | | | | | | | | | Position on chromosome: | 3:170151844-170151865 | | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,dasNov2,loxAfr3 | | Binding area: | | (Transcript) | 5' | UUUAUUC___AA____AAUCU________ | 3' | | | _______UUG__GUGA_____GUGCAAUA | | | | _______..|__..||_____|||||||| | | | | _______GGC__UGCU_____CACGUUAU | | | (miRNA) | 3' | ______C___CC_________________ | 5' |
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| | | | | 5 | ENSG00000013297 (CLDN11) | hsa-miR-6870-5p | 0.982571725494402 | | | | | | | | Gene details | | loading... | | | miRNA details | | loading... | |
pubMed links: miRNA | gene | both
UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 7mer | 154-168 | 0.0617519562842587 | 2 | | | | | | | | | | | Position on chromosome: | 3:170150699-170150713 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | GUAGUCUUAACUUC_______________ | 3' | | | ______________UCCCCAUUUCCCCCA | | | | ______________.||||||.||||||| | | | | ______________GGGGGUAGAGGGGGU | | | (miRNA) | 3' | _____________U_______________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 1122-1147 | 0.0148539264452491 | 2 | | | | | | | | | | | Position on chromosome: | 3:170151667-170151692 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | AAC____A_____UUUUAAAGCU________ | 3' | | | ___UAAC___CAU__________UUCCCCCA | | | | ___.|||___|||__________.||||||| | | | | ___GUUG___GUA__________GAGGGGGU | | | (miRNA) | 3' | __A____GGG_____________________ | 5' |
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| | | | | 6 | ENSG00000013297 (CLDN11) | hsa-miR-548x-3p | 0.982153902142948 | | | | | | | | Gene details | | loading... | | | miRNA details | | loading... | |
pubMed links: miRNA | gene | both
UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 6mer | 399-404 | 0.00507111360123963 | 1 | | | | | | | | | | | Position on chromosome: | 3:170150944-170150949 | | Conserved species: | rheMac2 | | Binding area: | | (Transcript) | 5' | UUUUUUUUUUUUUUUUUUUUUUU______ | 3' | | | _______________________UUUUUA | | | | _______________________|||||| | | | | _______________________AAAAAU | | | (miRNA) | 3' | ______________________C______ | 5' |
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| | | | | | | | | UTR3 | 6mer | 544-556 | 0.0035196628474662 | 1 | | | | | | | | | | | Position on chromosome: | 3:170151089-170151101 | | Conserved species: | panTro2 | | Binding area: | | (Transcript) | 5' | CGUUCACUACUACACC___CUAA______ | 3' | | | ________________CAG____UUUUUA | | | | ________________|||____|||||| | | | | ________________GUC____AAAAAU | | | (miRNA) | 3' | _______________C_____________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 545-563 | 0.00766691388809664 | 2 | | | | | | | | | | | Position on chromosome: | 3:170151090-170151108 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | ACUACACCC__C_____UUUA_______U | 3' | | | _________AG_UAAUU____AGUUUUU_ | | | | _________||_|||||____|||||||_ | | | | _________UC_AUUAA____UCAAAAA_ | | | (miRNA) | 3' | ________U________CG_________U | 5' |
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| | | | | | | | | UTR3 | 6mer | 864-890 | 0.00531594907759056 | 8 | | | | | | | | | | | Position on chromosome: | 3:170151409-170151435 | | Conserved species: | panTro2,rheMac2,rn4,mm9,bosTau4,canFam2,dasNov2,loxAfr3 | | Binding area: | | (Transcript) | 5' | UU_____CC__GG____GGAUAU______ | 3' | | | __GAGGG__AG__GUAG______UUUUUA | | | | __||..|__|.__|.||______|||||| | | | | __CUUUC__UU__CGUC______AAAAAU | | | (miRNA) | 3' | _______A___AA________________ | 5' |
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| | | | | | | | | UTR3 | 8mer | 1074-1095 | 0.0546380870159153 | 7 | | | | | | | | | | | Position on chromosome: | 3:170151619-170151640 | | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,dasNov2 | | Binding area: | | (Transcript) | 5' | GAUUUCA__UUU___UGA___________ | 3' | | | _______GG___GUA___UGUAGUUUUUA | | | | _______|.___|||___||.|||||||| | | | | _______CU___CAU___ACGUCAAAAAU | | | (miRNA) | 3' | _________UU____UA____________ | 5' |
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| | | | | 7 | ENSG00000013297 (CLDN11) | hsa-miR-205-5p | 0.980664496467192 | | | | | | | | Gene details | | loading... | | | miRNA details | | loading... | |
pubMed links: miRNA | gene | both
UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 8mer | 970-987 | 0.0748768227137667 | 11 | | | | | | | | | | | Position on chromosome: | 3:170151515-170151532 | | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,galGal3 | | Binding area: | | (Transcript) | 5' | UGAAAUCCUCA____AUCAAU_________ | 3' | | | ___________AUUC_______AUGAAGGA | | | | ___________|.||_______|||||||| | | | | ___________UGAG_______UACUUCCU | | | (miRNA) | 3' | __________C____GCCACCU________ | 5' |
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| | | | | 8 | ENSG00000013297 (CLDN11) | hsa-miR-548aj-3p | 0.978347308573411 | | | | | | | | Gene details | | loading... | | | miRNA details | | loading... | |
pubMed links: miRNA | gene | both
UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 6mer | 399-404 | 0.00507111360123963 | 1 | | | | | | | | | | | Position on chromosome: | 3:170150944-170150949 | | Conserved species: | rheMac2 | | Binding area: | | (Transcript) | 5' | UUUUUUUUUUUUUUUUUUUUUUU______ | 3' | | | _______________________UUUUUA | | | | _______________________|||||| | | | | _______________________AAAAAU | | | (miRNA) | 3' | ______________________C______ | 5' |
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| | | | | | | | | UTR3 | 6mer | 544-556 | 0.0035196628474662 | 1 | | | | | | | | | | | Position on chromosome: | 3:170151089-170151101 | | Conserved species: | panTro2 | | Binding area: | | (Transcript) | 5' | CGUUCACUACUACACC___CUAA______ | 3' | | | ________________CAG____UUUUUA | | | | ________________|||____|||||| | | | | ________________GUC____AAAAAU | | | (miRNA) | 3' | _______________C_____________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 545-563 | 0.00766691388809664 | 2 | | | | | | | | | | | Position on chromosome: | 3:170151090-170151108 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | ACUACACCC__C_____UUUA_______U | 3' | | | _________AG_UAAUU____AGUUUUU_ | | | | _________||_|||||____|||||||_ | | | | _________UC_AUUAA____UCAAAAA_ | | | (miRNA) | 3' | ________U________CG_________U | 5' |
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| | | | | | | | | UTR3 | 6mer | 871-890 | 0.0039887316375753 | 5 | | | | | | | | | | | Position on chromosome: | 3:170151416-170151435 | | Conserved species: | panTro2,rheMac2,bosTau4,canFam2,loxAfr3 | | Binding area: | | (Transcript) | 5' | UUGAGGGCC________GGA__U______ | 3' | | | _________AGGGGUAG___UA_UUUUUA | | | | _________|...|||.___.|_|||||| | | | | _________UUUUCAUU___GU_AAAAAU | | | (miRNA) | 3' | ________A________AAC__C______ | 5' |
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| | | | | | | | | UTR3 | 8mer | 1073-1095 | 0.0527418170205384 | 7 | | | | | | | | | | | Position on chromosome: | 3:170151618-170151640 | | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,dasNov2 | | Binding area: | | (Transcript) | 5' | GAUUUC___UUU___UGA___________ | 3' | | | ______AGG___GUA___UGUAGUUUUUA | | | | ______|..___|||___||.|||||||| | | | | ______UUU___CAU___ACGUCAAAAAU | | | (miRNA) | 3' | _____A___U_____UA____________ | 5' |
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| | | | | 9 | ENSG00000013297 (CLDN11) | hsa-miR-1275 | 0.962452041189395 | | | | | | | | Gene details | | loading... | | | miRNA details | | loading... | |
pubMed links: miRNA | gene | both
UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 7mer | 141-169 | 0.00999305082763969 | 2 | | | | | | | | | | | Position on chromosome: | 3:170150686-170150714 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | _______UAACUUCUCCCCAU_________ | 3' | | | _UAGUCU______________UUCCCCCAU | | | | _.||.||______________.|||||||. | | | | _GUCGGA______________GAGGGGGUG | | | (miRNA) | 3' | U_____________________________ | 5' |
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| | | | | | | | | UTR3 | 8mer | 1136-1148 | 0.0537302974215706 | 2 | | | | | | | | | | | Position on chromosome: | 3:170151681-170151693 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | ACUAACACAUUUUUAA______________ | 3' | | | ________________AG_CUUUCCCCCAC | | | | ________________||_||.|||||||| | | | | ________________UC_GAGAGGGGGUG | | | (miRNA) | 3' | _______________G__G___________ | 5' |
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| | | | | 10 | ENSG00000013297 (CLDN11) | hsa-miR-3152-3p | 0.961887171726929 | | | | | | | | Gene details | | loading... | | | miRNA details | | loading... | |
pubMed links: miRNA | gene | both
UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 8mer | 1112-1128 | 0.0634697067035302 | 2 | | | | | | | | | | | Position on chromosome: | 3:170151657-170151673 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | UACAUUUUCAUA___UU_AAA_________ | 3' | | | ____________UGC__C____CUAACACA | | | | ____________|||__|____|||||||| | | | | ____________ACG__G____GAUUGUGU | | | (miRNA) | 3' | ___________A___GG_AUAA________ | 5' |
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| | | | | 11 | ENSG00000013297 (CLDN11) | hsa-miR-1285-3p | 0.954058127567022 | | | | | | | | Gene details | | loading... | | | miRNA details | | loading... | |
pubMed links: miRNA | gene | both
UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 6mer | 23-47 | 0.00214308681611094 | 1 | | | | | | | | | | | Position on chromosome: | 3:170150568-170150592 | | Conserved species: | panTro2 | | Binding area: | | (Transcript) | 5' | ACAG____G__UG_AGA__CUGG_______ | 3' | | | ____AGGU__C__U___UG____GCCCAGG | | | | ____||||__|__|___||____||||||. | | | | ____UCCA__G__A___AC____CGGGUCU | | | (miRNA) | 3' | ________GA_UG_A____AA_________ | 5' |
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| | | | | | | | | UTR3 | 8mer | 199-215 | 0.0317394396298322 | 1 | | | | | | | | | | | Position on chromosome: | 3:170150744-170150760 | | Conserved species: | panTro2 | | Binding area: | | (Transcript) | 5' | AGAAAUCUCUAG____GA_AA_________ | 3' | | | ____________CUCA__U___UGCCCAGA | | | | ____________||||__|___|||||||| | | | | ____________GAGU__A___ACGGGUCU | | | (miRNA) | 3' | ___________A____GA_ACA________ | 5' |
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| | | | | | | | | UTR3 | 8mer+wobble | 409-430 | 0.00361515978261266 | 1 | | | | | | | | | | | Position on chromosome: | 3:170150954-170150975 | | Conserved species: | panTro2 | | Binding area: | | (Transcript) | 5' | UUAAAUA___C______C___________ | 3' | | | _______GGG_CUCACU_UGUUGCUCAGG | | | | _______.||_||||||_||||||.|||. | | | | _______UCC_GAGUGA_ACAACGGGUCU | | | (miRNA) | 3' | __________A______A___________ | 5' |
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| | | | | | | | | UTR3 | 8mer | 574-595 | 0.0226257034624416 | 2 | | | | | | | | | | | Position on chromosome: | 3:170151119-170151140 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | AGAGAUG___G___C__A___________ | 3' | | | _______AGG_CUC_CU_UGUUGCCCAGG | | | | _______|||_|||_||_||||||||||. | | | | _______UCC_GAG_GA_ACAACGGGUCU | | | (miRNA) | 3' | __________A___U__A___________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 530-549 | 0.00775470187006391 | 0 | | | | | | | | | | | Position on chromosome: | 3:170150451-170150470 | | Conserved species: | Not Conserved | | Binding area: | | (Transcript) | 5' | CAUCCUCUG__G____GGA_A________ | 3' | | | _________CU_CGCU___G_UGCCCAGG | | | | _________||_|.||___|_|||||||. | | | | _________GA_GUGA___C_ACGGGUCU | | | (miRNA) | 3' | ________A_______AA__A________ | 5' |
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| | | | | 12 | ENSG00000013297 (CLDN11) | hsa-miR-767-5p | 0.946677207635621 | | | | | | | | Gene details | | loading... | | | miRNA details | | loading... | |
pubMed links: miRNA | gene | both
UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 8mer | 1269-1290 | 0.0577206909402816 | 6 | | | | | | | | | | | Position on chromosome: | 3:170151814-170151835 | | Conserved species: | panTro2,rheMac2,bosTau4,canFam2,dasNov2,loxAfr3 | | Binding area: | | (Transcript) | 5' | CCCCAAA___UC___AAU___G________ | 3' | | | _______CUC___CA___ACU_AUGGUGCA | | | | _______|||___||___||._|||||||| | | | | _______GAG___GU___UGG_UACCACGU | | | (miRNA) | 3' | ______C___UCU_________________ | 5' |
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| | | | | 13 | ENSG00000013297 (CLDN11) | hsa-miR-99b-5p | 0.945395554033627 | | | | | | | | Gene details | | loading... | | | miRNA details | | loading... | |
pubMed links: miRNA | gene | both
UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 8mer | 1204-1231 | 0.0573103563801715 | 7 | | | | | | | | | | | Position on chromosome: | 3:170151749-170151776 | | Conserved species: | panTro2,rheMac2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1 | | Binding area: | | (Transcript) | 5' | U____CU__UGAAUU___C__________ | 3' | | | _UGUA__GU______UGG_UUUACGGGUG | | | | _.|.|__||______.||_|.|||||||| | | | | _GCGU__CA______GCC_AGAUGCCCAC | | | (miRNA) | 3' | _____UC___________A__________ | 5' |
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| | | | | 14 | ENSG00000013297 (CLDN11) | hsa-miR-501-3p | 0.938549682849744 | | | | | | | | Gene details | | loading... | | | miRNA details | | loading... | |
pubMed links: miRNA | gene | both
UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 8mer | 1272-1292 | 0.0552611304928388 | 8 | | | | | | | | | | | Position on chromosome: | 3:170151817-170151837 | | Conserved species: | panTro2,rheMac2,rn4,mm9,bosTau4,canFam2,dasNov2,loxAfr3 | | Binding area: | | (Transcript) | 5' | CCAAACUC___AAAUA___AU________ | 3' | | | ________UCC_____CUG__GGUGCAUU | | | | ________|||_____|.|__|||||||| | | | | ________AGG_____GGC__CCACGUAA | | | (miRNA) | 3' | _______U___AACG______________ | 5' |
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| | | | | 15 | ENSG00000013297 (CLDN11) | hsa-miR-625-5p | 0.924300227344262 | | | | | | | | Gene details | | loading... | | | miRNA details | | loading... | |
pubMed links: miRNA | gene | both
UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 8mer | 149-167 | 0.0235808535802934 | 2 | | | | | | | | | | | Position on chromosome: | 3:170150694-170150712 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | GUAGUCUUA___UCUCCCCA________A | 3' | | | _________ACU________UUUCCCCC_ | | | | _________|||________||||||||_ | | | | _________UGA________AAAGGGGG_ | | | (miRNA) | 3' | ________C___UAUCUUG_________A | 5' |
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| | | | | | | | | UTR3 | 8mer | 1120-1146 | 0.0280217652275108 | 2 | | | | | | | | | | | Position on chromosome: | 3:170151665-170151691 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | A____ACACAUUUU__A___________A | 3' | | | _ACUA_________UA_AGCUUUCCCCC_ | | | | _||||_________||_|.|||||||||_ | | | | _UGAU_________AU_UUGAAAGGGGG_ | | | (miRNA) | 3' | C_______________C___________A | 5' |
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| | | | | 16 | ENSG00000013297 (CLDN11) | hsa-miR-137 | 0.921613001453778 | | | | | | | | Gene details | | loading... | | | miRNA details | | loading... | |
pubMed links: miRNA | gene | both
UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 6mer | 802-822 | 0.00250457915961039 | 1 | | | | | | | | | | | Position on chromosome: | 3:170151347-170151367 | | Conserved species: | panTro2 | | Binding area: | | (Transcript) | 5' | GACAUGGG___G_GGAGGGA_________ | 3' | | | ________AUG_G_______GGGCAAUAG | | | | ________|.|_|_______..||||||. | | | | ________UGC_C_______UUCGUUAUU | | | (miRNA) | 3' | _______A___G_AUAAGAA_________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 989-1015 | 0.0208278420012417 | 5 | | | | | | | | | | | Position on chromosome: | 3:170151534-170151560 | | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2 | | Binding area: | | (Transcript) | 5' | AA___AACCACA__GA___UAU_______ | 3' | | | __AUG_______UA__CUU___GCAAUAA | | | | __|.|_______||__|||___||||||| | | | | __UGC_______AU__GAA___CGUUAUU | | | (miRNA) | 3' | _A___GC_______AA___UU________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 1298-1321 | 0.0276524868127027 | 10 | | | | | | | | | | | Position on chromosome: | 3:170151843-170151866 | | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1 | | Binding area: | | (Transcript) | 5' | UUAUU__UGAA___AAA___GU________ | 3' | | | _____CU____GUG___UCU___GCAAUAA | | | | _____||____|.|___|||___||||||| | | | | _____GA____CGC___AGA___CGUUAUU | | | (miRNA) | 3' | _______UG_____AUA___AUU_______ | 5' |
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| | | | | 17 | ENSG00000013297 (CLDN11) | hsa-miR-548l | 0.921401857989326 | | | | | | | | Gene details | | loading... | | | miRNA details | | loading... | |
pubMed links: miRNA | gene | both
UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 8mer | 355-377 | 0.0182485049299689 | 0 | | | | | | | | | | | Position on chromosome: | 3:170150900-170150922 | | Conserved species: | Not Conserved | | Binding area: | | (Transcript) | 5' | GGUGGG__AGA_____ACA___________ | 3' | | | ______GA___GAAAU____AGAUACUUUU | | | | ______||___.|||.____|.|||||||| | | | | ______CU___UUUUG____UUUAUGAAAA | | | (miRNA) | 3' | ________G_______GGCG__________ | 5' |
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| | | | | | | | | UTR3 | 8mer | 903-924 | 0.0277202477471536 | 8 | | | | | | | | | | | Position on chromosome: | 3:170151448-170151469 | | Conserved species: | panTro2,rheMac2,rn4,bosTau4,canFam2,dasNov2,loxAfr3,galGal3 | | Binding area: | | (Transcript) | 5' | UGAUUUU___UUU_______C________ | 3' | | | _______ACA___AUCUGUA_AUACUUUU | | | | _______|||___|.|.|.|_|||||||| | | | | _______UGU___UGGGCGU_UAUGAAAA | | | (miRNA) | 3' | ______C___UU________U________ | 5' |
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| | | | | | | | | UTR3 | 6mer | 1133-1152 | 0.00496844550520332 | 2 | | | | | | | | | | | Position on chromosome: | 3:170151678-170151697 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | ACACAUUUU_______UU_CCCC______ | 3' | | | _________UAAAGCU__C____ACUUUU | | | | _________.|||.|.__|____|||||| | | | | _________GUUUUGG__G____UGAAAA | | | (miRNA) | 3' | ________U_______GC_UUUA______ | 5' |
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| | | | | 18 | ENSG00000013297 (CLDN11) | hsa-miR-502-3p | 0.910419317250399 | | | | | | | | Gene details | | loading... | | | miRNA details | | loading... | |
pubMed links: miRNA | gene | both
UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 8mer | 1272-1292 | 0.0486035660397444 | 8 | | | | | | | | | | | Position on chromosome: | 3:170151817-170151837 | | Conserved species: | panTro2,rheMac2,rn4,mm9,bosTau4,canFam2,dasNov2,loxAfr3 | | Binding area: | | (Transcript) | 5' | CCAAACUC___AAAUA__G_U________ | 3' | | | ________UCC_____CU_A_GGUGCAUU | | | | ________|||_____|._|_|||||||| | | | | ________AGG_____GG_U_CCACGUAA | | | (miRNA) | 3' | _______U___AAC____G__________ | 5' |
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| | | | | 19 | ENSG00000013297 (CLDN11) | hsa-miR-1277-5p | 0.900861278602399 | | | | | | | | Gene details | | loading... | | | miRNA details | | loading... | |
pubMed links: miRNA | gene | both
UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 7mer | 271-289 | 0.0218216961588201 | 2 | | | | | | | | | | | Position on chromosome: | 3:170150816-170150834 | | Conserved species: | panTro2,canFam2 | | Binding area: | | (Transcript) | 5' | UUCUUUUGC___U___UAAAA________A | 3' | | | _________UGU_UAU______AUAUAUU_ | | | | _________.||_.||______|||||||_ | | | | _________GCA_GUA______UAUAUAA_ | | | (miRNA) | 3' | ________U___U___UAUAUA_______A | 5' |
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| | | | | | | | | UTR3 | 9mer | 283-299 | 0.0182065326964095 | 2 | | | | | | | | | | | Position on chromosome: | 3:170150828-170150844 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | UGUUUAUUAAAA__________________ | 3' | | | ____________AUAUAU_UAUAUAUAUUU | | | | ____________|.||||_||||||||||| | | | | ____________UGUAUA_AUAUAUAUAAA | | | (miRNA) | 3' | ___________A______U___________ | 5' |
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| | | | | | | | | UTR3 | 6mer | 865-886 | 0.00674588707384173 | 5 | | | | | | | | | | | Position on chromosome: | 3:170151410-170151431 | | Conserved species: | panTro2,rheMac2,oryCun2,bosTau4,canFam2 | | Binding area: | | (Transcript) | 5' | UAAGUUG_G_GC__GGG___GGG______ | 3' | | | _______A_G__CA___GUA___AUAUUU | | | | _______|_|__||___.||___|||||| | | | | _______U_C__GU___UAU___UAUAAA | | | (miRNA) | 3' | ______A_G_AU__AUA___AUA______ | 5' |
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| | | | | 20 | ENSG00000013297 (CLDN11) | hsa-miR-363-3p | 0.889521559656727 | | | | | | | | Gene details | | loading... | | | miRNA details | | loading... | |
pubMed links: miRNA | gene | both
UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 6mer | 998-1013 | 0.00930378945620894 | 5 | | | | | | | | | | | Position on chromosome: | 3:170151543-170151558 | | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2 | | Binding area: | | (Transcript) | 5' | GAAAUGAACCAC_____CUU____________A | 3' | | | ____________AUAGA____UA___UGCAAU_ | | | | ____________|.|||____||___||||||_ | | | | ____________UGUCU____AU___ACGUUA_ | | | (miRNA) | 3' | ___________A_____ACCU__GGC______A | 5' |
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| | | | | | | | | UTR3 | 7mer | 1299-1319 | 0.0354932342591343 | 8 | | | | | | | | | | | Position on chromosome: | 3:170151844-170151864 | | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,dasNov2,loxAfr3 | | Binding area: | | (Transcript) | 5' | UUUAUUC_UG_A___AAAU_________A | 3' | | | _______U__A_GUG____CUGUGCAAU_ | | | | _______|__|_.||____|.|||||||_ | | | | _______A__U_UAC____GGCACGUUA_ | | | (miRNA) | 3' | ________UG_C___CUAU_________A | 5' |
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| | | | | 21 | ENSG00000013297 (CLDN11) | hsa-miR-548n | 0.889343663523919 | | | | | | | | Gene details | | loading... | | | miRNA details | | loading... | |
pubMed links: miRNA | gene | both
UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 6mer | 158-175 | 0.00391619053141557 | 3 | | | | | | | | | | | Position on chromosome: | 3:170150703-170150720 | | Conserved species: | panTro2,rheMac2,oryCun2 | | Binding area: | | (Transcript) | 5' | UAACUUCUCCC__UU____CC__U_________ | 3' | | | ___________CA___UCC__CA____CUUUUG | | | | ___________||___|||__||____|||||| | | | | ___________GU___AGG__GU____GAAAAC | | | (miRNA) | 3' | __________U__UUU___U___UAAU______ | 5' |
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| | | | | | | | | UTR3 | 7mer | 354-377 | 0.0138365224489738 | 0 | | | | | | | | | | | Position on chromosome: | 3:170150899-170150922 | | Conserved species: | Not Conserved | | Binding area: | | (Transcript) | 5' | GUGG_G____GAAA_____GA_______U | 3' | | | ____G_AAGA____UACAA__UACUUUU_ | | | | ____._||.|____.||||__|||||||_ | | | | ____U_UUUU____GUGUU__AUGAAAA_ | | | (miRNA) | 3' | _____G____AG_______A________C | 5' |
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| | | | | | | | | UTR3 | 6mer | 713-739 | 0.00438257722766601 | 2 | | | | | | | | | | | Position on chromosome: | 3:170151258-170151284 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | CA__GG_AG__U__UAAAGAUG_______ | 3' | | | __AU__G__CC_CA________GCUUUUG | | | | __|.__.__||_||________.|||||| | | | | __UG__U__GG_GU________UGAAAAC | | | (miRNA) | 3' | ____UU_UA__U__UAA____________ | 5' |
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| | | | | | | | | UTR3 | 6mer | 831-857 | 0.00440763456999924 | 4 | | | | | | | | | | | Position on chromosome: | 3:170151376-170151402 | | Conserved species: | panTro2,rheMac2,canFam2,dasNov2 | | Binding area: | | (Transcript) | 5' | GA__UU_________GAAACUUUCC______ | 3' | | | __AC____UCCAUGG__________CUUUUG | | | | __||____||||...__________|||||| | | | | __UG____AGGUGUU__________GAAAAC | | | (miRNA) | 3' | ____UUUU_______AAU_____________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 903-924 | 0.0129117491270943 | 9 | | | | | | | | | | | Position on chromosome: | 3:170151448-170151469 | | Conserved species: | panTro2,rheMac2,rn4,mm9,bosTau4,canFam2,dasNov2,loxAfr3,galGal3 | | Binding area: | | (Transcript) | 5' | GAUUUU___UUU____GU____________U | 3' | | | ______ACA___AUCU__ACA__UACUUUU_ | | | | ______|||___|||.__|||__|||||||_ | | | | ______UGU___UAGG__UGU__AUGAAAA_ | | | (miRNA) | 3' | _________UU__________UA_______C | 5' |
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| | | | | | | | | UTR3 | 6mer | 1133-1152 | 0.00531278442694325 | 2 | | | | | | | | | | | Position on chromosome: | 3:170151678-170151697 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | CACAUUUU_____CUU_____CC________C | 3' | | | ________UAAAG___UCC_C____ACUUUU_ | | | | ________.|||.___|||_|____||||||_ | | | | ________GUUUU___AGG_G____UGAAAA_ | | | (miRNA) | 3' | _______U___________U_UUAA______C | 5' |
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| | | | | 22 | ENSG00000013297 (CLDN11) | hsa-miR-3187-5p | 0.877405381711933 | | | | | | | | Gene details | | loading... | | | miRNA details | | loading... | |
pubMed links: miRNA | gene | both
UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 7mer | 20-47 | 0.00328814191853123 | 1 | | | | | | | | | | | Position on chromosome: | 3:170150565-170150592 | | Conserved species: | panTro2 | | Binding area: | | (Transcript) | 5' | A___AGGUGCUG__G_____GG_______ | 3' | | | _CAG________UA_AUGCU__GCCCAGG | | | | _|||________.|_|.|||__||||||| | | | | _GUC________GU_UGCGA__CGGGUCC | | | (miRNA) | 3' | A___G_________G______________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 192-214 | 0.0181003543556698 | 1 | | | | | | | | | | | Position on chromosome: | 3:170150737-170150759 | | Conserved species: | panTro2 | | Binding area: | | (Transcript) | 5' | AGAAA___C____U__G__AA_______A | 3' | | | _____UCU_UAGC_CA_AU__UGCCCAG_ | | | | _____.||_.|||_||_|.__|||||||_ | | | | _____GGA_GUCG_GU_UG__ACGGGUC_ | | | (miRNA) | 3' | ________A_______G__CG_______C | 5' |
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| | | | | | | | | UTR3 | 8mer | 578-595 | 0.0202381620360868 | 2 | | | | | | | | | | | Position on chromosome: | 3:170151123-170151140 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | AGAGAUGAGGG_UC________________ | 3' | | | ___________C__CC_UAUGUUGCCCAGG | | | | ___________|__||_.|.|.|||||||| | | | | ___________G__GG_GUGCGACGGGUCC | | | (miRNA) | 3' | __________A_UC__U_____________ | 5' |
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| | | | | | | | | UTR3 | 8mer | 524-549 | 0.0104054569636694 | 0 | | | | | | | | | | | Position on chromosome: | 3:170150445-170150470 | | Conserved species: | Not Conserved | | Binding area: | | (Transcript) | 5' | CAU_____U__UG___UG_AGA________ | 3' | | | ___CC_UC_GC__CGC__G___UGCCCAGG | | | | ___||_||_||__|.|__|___|||||||| | | | | ___GG_AG_CG__GUG__C___ACGGGUCC | | | (miRNA) | 3' | _____A__U_______UG_G__________ | 5' |
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| | | | | 23 | ENSG00000013297 (CLDN11) | hsa-miR-7856-5p | 0.870769173254821 | | | | | | | | Gene details | | loading... | | | miRNA details | | loading... | |
pubMed links: miRNA | gene | both
UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 8mer | 168-187 | 0.0379293512591459 | 8 | | | | | | | | | | | Position on chromosome: | 3:170150713-170150732 | | Conserved species: | panTro2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3 | | Binding area: | | (Transcript) | 5' | AUUUCCCCC__________UG________ | 3' | | | _________AUCUUUUGGU__CCUUAAAA | | | | _________|||..|..||__|||||||| | | | | _________UAGGGAGUCA__GGAAUUUU | | | (miRNA) | 3' | ________C__________CA________ | 5' |
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| | | | | | | | | UTR3 | 6mer | 261-282 | 0.00395703423477907 | 3 | | | | | | | | | | | Position on chromosome: | 3:170150806-170150827 | | Conserved species: | panTro2,rheMac2,oryCun2 | | Binding area: | | (Transcript) | 5' | CUUGGGC_______UGC_____A______ | 3' | | | _______AUUCUUU___UGUUU_UUAAAA | | | | _______||.|.|.___|||.._|||||| | | | | _______UAGGGAG___ACAGG_AAUUUU | | | (miRNA) | 3' | ______C_______UC_____________ | 5' |
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| | | | | 24 | ENSG00000013297 (CLDN11) | hsa-miR-25-3p | 0.870537383931426 | | | | | | | | Gene details | | loading... | | | miRNA details | | loading... | |
pubMed links: miRNA | gene | both
UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 6mer | 996-1013 | 0.00909059147805528 | 5 | | | | | | | | | | | Position on chromosome: | 3:170151541-170151558 | | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2 | | Binding area: | | (Transcript) | 5' | GAAAUGAACC__AU____UUUA______A | 3' | | | __________AC__AGAC____UGCAAU_ | | | | __________||__||||____||||||_ | | | | __________UG__UCUG____ACGUUA_ | | | (miRNA) | 3' | _________C__GC____UUC_______C | 5' |
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| | | | | | | | | UTR3 | 7mer | 1299-1319 | 0.0327621544883292 | 8 | | | | | | | | | | | Position on chromosome: | 3:170151844-170151864 | | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,dasNov2,loxAfr3 | | Binding area: | | (Transcript) | 5' | UUUAUUC___A__UG__AUCU_______A | 3' | | | _______UUG_AG__AA____GUGCAAU_ | | | | _______..|_||__||____|||||||_ | | | | _______GGC_UC__UU____CACGUUA_ | | | (miRNA) | 3' | ______U______UG_____________C | 5' |
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| | | | | 25 | ENSG00000013297 (CLDN11) | hsa-miR-1324 | 0.86843729653309 | | | | | | | | Gene details | | loading... | | | miRNA details | | loading... | |
pubMed links: miRNA | gene | both
UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 8mer | 107-133 | 0.0152910264799332 | 4 | | | | | | | | | | | Position on chromosome: | 3:170150652-170150678 | | Conserved species: | panTro2,rheMac2,oryCun2,bosTau4 | | Binding area: | | (Transcript) | 5' | CC_______C_____AAGCAUC________ | 3' | | | __AAAG_GU_UAGAA_______CUGUCUGG | | | | __||||_|._|||||_______|||||||| | | | | __UUUC_CG_AUCUU_______GACAGACC | | | (miRNA) | 3' | _C____A__U_____AA_____________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 1313-1337 | 0.0262592464514239 | 5 | | | | | | | | | | | Position on chromosome: | 3:170151858-170151882 | | Conserved species: | panTro2,rheMac2,oryCun2,bosTau4,monDom5 | | Binding area: | | (Transcript) | 5' | UCU____A___A___AACAGA_______C | 3' | | | ___GUGC_AUA_AAU______CUGUCUG_ | | | | ___||||_|||_|||______|||||||_ | | | | ___CACG_UAU_UUA______GACAGAC_ | | | (miRNA) | 3' | __U________C___A____________C | 5' |
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| | | | | 26 | ENSG00000013297 (CLDN11) | hsa-miR-4688 | 0.865634932390207 | | | | | | | | Gene details | | loading... | | | miRNA details | | loading... | |
pubMed links: miRNA | gene | both
UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 8mer | 225-242 | 0.0411529673235937 | 0 | | | | | | | | | | | Position on chromosome: | 3:170150770-170150787 | | Conserved species: | Not Conserved | | Binding area: | | (Transcript) | 5' | GACAUUUUUUU___UU__________________ | 3' | | | ___________CCC__GG_____UGUUGCCCCUA | | | | ___________|||__||_____||.|||||||| | | | | ___________GGG__CC_____ACGACGGGGAU | | | (miRNA) | 3' | ______________U___AGGAG___________ | 5' |
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| | | | | 27 | ENSG00000013297 (CLDN11) | hsa-miR-5189-5p | 0.863416742137532 | | | | | | | | Gene details | | loading... | | | miRNA details | | loading... | |
pubMed links: miRNA | gene | both
UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 6mer | 28-47 | 0.00174557577250404 | 1 | | | | | | | | | | | Position on chromosome: | 3:170150573-170150592 | | Conserved species: | panTro2 | | Binding area: | | (Transcript) | 5' | ACAGAGGUG____AGA______GG________ | 3' | | | _________CUGU_____UGCU___GCCCAGG | | | | _________||||_____.||.___||||||. | | | | _________GACA_____GCGG___CGGGUCU | | | (miRNA) | 3' | ________G____GGUAG____ACA_______ | 5' |
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| | | | | | | | | UTR3 | 8mer | 194-215 | 0.0297418604494428 | 1 | | | | | | | | | | | Position on chromosome: | 3:170150739-170150760 | | Conserved species: | panTro2 | | Binding area: | | (Transcript) | 5' | AGAAAUC____GC__A_AUAA________ | 3' | | | _______UCUA__UC_G____UGCCCAGA | | | | _______||.|__.|_|____|||||||| | | | | _______AGGU__GG_C____ACGGGUCU | | | (miRNA) | 3' | ______C____A_____GGAC________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 579-595 | 0.00857766207227244 | 2 | | | | | | | | | | | Position on chromosome: | 3:170151124-170151140 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | AGAGAUGAGGGC___CUA______________ | 3' | | | ____________UCC___UGU___UGCCCAGG | | | | ____________|||___.|.___|||||||. | | | | ____________AGG___GCG___ACGGGUCU | | | (miRNA) | 3' | ___________C___UAG___GAC________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 523-549 | 0.00607779398854352 | 0 | | | | | | | | | | | Position on chromosome: | 3:170150444-170150470 | | Conserved species: | Not Conserved | | Binding area: | | (Transcript) | 5' | CA___UCUG____G___GAGA________ | 3' | | | __UCC____CUGC_CUG____UGCCCAGG | | | | __|||____|.||_|||____|||||||. | | | | __AGG____GGCG_GAC____ACGGGUCU | | | (miRNA) | 3' | _C___UA______________________ | 5' |
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| | | | | 28 | ENSG00000013297 (CLDN11) | hsa-miR-548am-3p | 0.862692656223181 | | | | | | | | Gene details | | loading... | | | miRNA details | | loading... | |
pubMed links: miRNA | gene | both
UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 7mer | 539-563 | 0.0115373370104489 | 2 | | | | | | | | | | | Position on chromosome: | 3:170151084-170151108 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | ACU___CCC__C_____UUUA_______U | 3' | | | ___ACA___AG_UAAUU____AGUUUUU_ | | | | ___|||___||_|||.|____|||||||_ | | | | ___UGU___UC_AUUGA____UCAAAAA_ | | | (miRNA) | 3' | ______UU_________CG_________C | 5' |
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| | | | | | | | | UTR3 | 7mer | 1072-1094 | 0.0292059514293361 | 7 | | | | | | | | | | | Position on chromosome: | 3:170151617-170151639 | | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,dasNov2 | | Binding area: | | (Transcript) | 5' | GAUUU____UUU___UGA__________A | 3' | | | _____CAGG___GUA___UGUAGUUUUU_ | | | | _____||..___|||___||.|||||||_ | | | | _____GUUU___CAU___ACGUCAAAAA_ | | | (miRNA) | 3' | ____U____U_____UG___________C | 5' |
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| | | | | 29 | ENSG00000013297 (CLDN11) | hsa-miR-548ah-3p | 0.861708378500733 | | | | | | | | Gene details | | loading... | | | miRNA details | | loading... | |
pubMed links: miRNA | gene | both
UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 7mer | 544-563 | 0.0111521635136443 | 2 | | | | | | | | | | | Position on chromosome: | 3:170151089-170151108 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | ACUACACC___CUAAUU__UA_______U | 3' | | | ________CAG______UU__AGUUUUU_ | | | | ________||.______.|__|||||||_ | | | | ________GUU______GA__UCAAAAA_ | | | (miRNA) | 3' | _______C___UUCAUU__CG_______C | 5' |
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| | | | | | | | | UTR3 | 7mer | 1072-1094 | 0.0294557243815453 | 7 | | | | | | | | | | | Position on chromosome: | 3:170151617-170151639 | | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,dasNov2 | | Binding area: | | (Transcript) | 5' | GAUUU____UUU___UGA__________A | 3' | | | _____CAGG___GUA___UGUAGUUUUU_ | | | | _____||..___|||___||.|||||||_ | | | | _____GUUU___CAU___ACGUCAAAAA_ | | | (miRNA) | 3' | ____C____U_____UG___________C | 5' |
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| | | | | 30 | ENSG00000013297 (CLDN11) | hsa-miR-2467-5p | 0.858529806680452 | | | | | | | | Gene details | | loading... | | | miRNA details | | loading... | |
pubMed links: miRNA | gene | both
UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 7mer | 450-469 | 0.00715407593530252 | 2 | | | | | | | | | | | Position on chromosome: | 3:170150995-170151014 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | GUGGUGUGA__UC____C__GU_______ | 3' | | | _________UC__GGCU_AU__AGCCUCA | | | | _________.|__||||_|.__||||||| | | | | _________GG__CCGA_UG__UCGGAGU | | | (miRNA) | 3' | ________C__UU____U__UC_______ | 5' |
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| | | | | | | | | UTR3 | 6mer | 478-501 | 0.00143910319997401 | 2 | | | | | | | | | | | Position on chromosome: | 3:170151023-170151046 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | UCCCC___U____U_AUCCUCCU______ | 3' | | | _____GGC_CAAG_G________GCCUCA | | | | _____.||_||||_|________|||||| | | | | _____UCG_GUUC_C________CGGAGU | | | (miRNA) | 3' | ____C__________GAUUGUCU______ | 5' |
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| | | | | | | | | UTR3 | 6mer | 481-506 | 0.00158408205202071 | 2 | | | | | | | | | | | Position on chromosome: | 3:170151026-170151051 | | Conserved species: | panTro2,rheMac2 | | Binding area: | | (Transcript) | 5' | GC_____UGAUCCUC___C_UC______C | 3' | | | __UCAAG________CUG_C__AGCCUC_ | | | | __.||||________||._|__||||||_ | | | | __GGUUC________GAU_G__UCGGAG_ | | | (miRNA) | 3' | _C_____C__________U_UC______U | 5' |
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| | | | | | | | | UTR3 | 8mer | 700-724 | 0.0299988212111727 | 6 | | | | | | | | | | | Position on chromosome: | 3:170151245-170151269 | | Conserved species: | panTro2,rheMac2,oryCun2,bosTau4,canFam2,dasNov2 | | Binding area: | | (Transcript) | 5' | AACU__UA___AU_A_A_UG_________ | 3' | | | ____GA__CAG__G_C_A__GGAGCCUCA | | | | ____||__||.__|_|_|__.|||||||| | | | | ____CU__GUU__C_G_U__UCUCGGAGU | | | (miRNA) | 3' | ______CG______C_A_UG_________ | 5' |
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